RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 PSPHP1O15172 72 aa4.59□□□□□ -1.67
ATXN3-249ENST00000564606 TRRAPQ9Y4A5 3859 aa4.59□□□□□ -1.68
ATXN3-249ENST00000564606 ATP11AUNQ6ZP68 121 aa4.58□□□□□ -1.68
ATXN3-249ENST00000564606 LINC01558Q9Y6Z2 57 aa4.58□□□□□ -1.68
ATXN3-249ENST00000564606 A8MUN3 132 aa4.57□□□□□ -1.68
ATXN3-249ENST00000564606 A6NED7 52 aa4.56□□□□□ -1.68
ATXN3-249ENST00000564606 LINC00313P59037 77 aa4.56□□□□□ -1.68
ATXN3-249ENST00000564606 PMAIP1Q13794 54 aa4.56□□□□□ -1.68
ATXN3-249ENST00000564606 PCOTHQ58A44 107 aa4.56□□□□□ -1.68
ATXN3-249ENST00000564606 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
ATXN3-249ENST00000564606 PKD1L1Q8TDX9 2849 aa4.55□□□□□ -1.68
ATXN3-249ENST00000564606 NOTCH1P46531 2555 aa4.55□□□□□ -1.68
ATXN3-249ENST00000564606 Q5VV11 94 aa4.55□□□□□ -1.68
ATXN3-249ENST00000564606 CIRBP-AS1Q8TBR5 109 aa4.55□□□□□ -1.68
ATXN3-249ENST00000564606 NBEAL1Q6ZS30 2694 aa4.54□□□□□ -1.68
ATXN3-249ENST00000564606 PANO1I0J062 215 aa4.54□□□□□ -1.68
ATXN3-249ENST00000564606 CDC42SE1Q9NRR8 79 aa4.54□□□□□ -1.68
ATXN3-249ENST00000564606 COL6A5A8TX70 2615 aa4.54□□□□□ -1.68
ATXN3-249ENST00000564606 FBN1P35555 2871 aaKnown RBP4.53□□□□□ -1.68
ATXN3-249ENST00000564606 SPINK6Q6UWN8 80 aa4.52□□□□□ -1.69
ATXN3-249ENST00000564606 LY6G6CO95867 125 aa4.51□□□□□ -1.69
ATXN3-249ENST00000564606 Q8N1X5 172 aa4.5□□□□□ -1.69
ATXN3-249ENST00000564606 SPTSSBQ8NFR3 76 aa4.5□□□□□ -1.69
ATXN3-249ENST00000564606 MGAM2Q2M2H8 2515 aa4.5□□□□□ -1.69
ATXN3-249ENST00000564606 RPS29P62273 56 aaKnown RBP4.49□□□□□ -1.69
ATXN3-249ENST00000564606 SPAG11AQ6PDA7 123 aa4.49□□□□□ -1.69
ATXN3-249ENST00000564606 STAB2Q8WWQ8 2551 aa4.48□□□□□ -1.69
ATXN3-249ENST00000564606 SPINK1P00995 79 aa4.48□□□□□ -1.69
ATXN3-249ENST00000564606 HRES1P13985 223 aa4.48□□□□□ -1.69
ATXN3-249ENST00000564606 DMAC1Q96GE9 116 aa4.48□□□□□ -1.69
ATXN3-249ENST00000564606 CMYA5Q8N3K9 4069 aa4.47□□□□□ -1.69
ATXN3-249ENST00000564606 KRTAP9-9Q9BYP9 154 aa4.47□□□□□ -1.69
ATXN3-249ENST00000564606 KRTAP9-4Q9BYQ2 154 aa4.47□□□□□ -1.69
ATXN3-249ENST00000564606 DNAH1Q9P2D7 4330 aa4.47□□□□□ -1.69
ATXN3-249ENST00000564606 A0A087X002 238 aa4.46□□□□□ -1.7
ATXN3-249ENST00000564606 KTN1-AS1Q86SY8 53 aa4.46□□□□□ -1.7
ATXN3-249ENST00000564606 PRR26Q8N8Z3 221 aa4.46□□□□□ -1.7
ATXN3-249ENST00000564606 ANK2Q01484 3957 aa4.45□□□□□ -1.7
ATXN3-249ENST00000564606 IGKV2-30P06310 120 aa4.45□□□□□ -1.7
ATXN3-249ENST00000564606 HUWE1Q7Z6Z7 4374 aaKnown RBP4.45□□□□□ -1.7
ATXN3-249ENST00000564606 A0A1B0GU69 56 aa4.44□□□□□ -1.7
ATXN3-249ENST00000564606 SEC61GP60059 68 aa4.44□□□□□ -1.7
ATXN3-249ENST00000564606 KRTAP13-3Q3SY46 172 aa4.44□□□□□ -1.7
ATXN3-249ENST00000564606 Q5W150 140 aa4.44□□□□□ -1.7
ATXN3-249ENST00000564606 Q6ZSA8 131 aa4.44□□□□□ -1.7
ATXN3-249ENST00000564606 ANAPC11Q9NYG5 84 aa4.44□□□□□ -1.7
ATXN3-249ENST00000564606 TYMSOSQ8TAI1 123 aa4.43□□□□□ -1.7
ATXN3-249ENST00000564606 DYNC2H1Q8NCM8 4307 aaKnown RBP4.43□□□□□ -1.7
ATXN3-249ENST00000564606 UQCR11O14957 56 aa4.41□□□□□ -1.7
ATXN3-249ENST00000564606 C7orf65Q6ZTY9 151 aa4.4□□□□□ -1.71
ATXN3-249ENST00000564606 NOTCH2NLQ7Z3S9 236 aa4.39□□□□□ -1.71
ATXN3-249ENST00000564606 LCA10Q71F78 164 aa4.38□□□□□ -1.71
ATXN3-249ENST00000564606 IGKV2D-30A0A075B6S6 120 aa4.37□□□□□ -1.71
ATXN3-249ENST00000564606 LINC00304Q8N9R0 145 aa4.37□□□□□ -1.71
ATXN3-249ENST00000564606 KRTAP9-3Q9BYQ3 159 aa4.37□□□□□ -1.71
ATXN3-249ENST00000564606 A6NN06 94 aa4.36□□□□□ -1.71
ATXN3-249ENST00000564606 KRTAP21-3Q3LHN1 58 aa4.36□□□□□ -1.71
ATXN3-249ENST00000564606 KRTAP13-2Q52LG2 175 aa4.36□□□□□ -1.71
ATXN3-249ENST00000564606 KRTAP16-1A8MUX0 517 aa4.34□□□□□ -1.71
ATXN3-249ENST00000564606 SPATA8Q6RVD6 105 aa4.34□□□□□ -1.71
ATXN3-249ENST00000564606 KRTAP4-8A0A0G2JLE6 195 aa4.33□□□□□ -1.72
ATXN3-249ENST00000564606 KRTAP10-1P60331 282 aa4.33□□□□□ -1.72
ATXN3-249ENST00000564606 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
ATXN3-249ENST00000564606 COL7A1Q02388 2944 aa4.33□□□□□ -1.72
ATXN3-249ENST00000564606 DNAH9Q9NYC9 4486 aa4.33□□□□□ -1.72
ATXN3-249ENST00000564606 KRTAP1-4P0C5Y4 121 aa4.32□□□□□ -1.72
ATXN3-249ENST00000564606 SPINK7P58062 85 aa4.32□□□□□ -1.72
ATXN3-249ENST00000564606 SRRM2Q9UQ35 2752 aaKnown RBP4.32□□□□□ -1.72
ATXN3-249ENST00000564606 TENM2Q9NT68 2774 aa4.31□□□□□ -1.72
ATXN3-249ENST00000564606 VPS13DQ5THJ4 4388 aa4.3□□□□□ -1.72
ATXN3-249ENST00000564606 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
ATXN3-249ENST00000564606 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
ATXN3-249ENST00000564606 RETNLBQ9BQ08 111 aa4.28□□□□□ -1.72
ATXN3-249ENST00000564606 DNAH10Q8IVF4 4471 aa4.27□□□□□ -1.73
ATXN3-249ENST00000564606 K7ERS5 55 aa4.27□□□□□ -1.73
ATXN3-249ENST00000564606 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
ATXN3-249ENST00000564606 C20orf166-AS1Q96NR2 134 aa4.26□□□□□ -1.73
ATXN3-249ENST00000564606 DNAH7Q8WXX0 4024 aa4.26□□□□□ -1.73
ATXN3-249ENST00000564606 PLECQ15149 4684 aaKnown RBP4.26□□□□□ -1.73
ATXN3-249ENST00000564606 HECTD4Q9Y4D8 3996 aa4.26□□□□□ -1.73
ATXN3-249ENST00000564606 MEGF8Q7Z7M0 2845 aa4.25□□□□□ -1.73
ATXN3-249ENST00000564606 A8MUU9 505 aa4.25□□□□□ -1.73
ATXN3-249ENST00000564606 LYSTQ99698 3801 aa4.25□□□□□ -1.73
ATXN3-249ENST00000564606 RBM12B-AS1Q9P1G2 102 aa4.25□□□□□ -1.73
ATXN3-249ENST00000564606 A8MU10 97 aa4.23□□□□□ -1.73
ATXN3-249ENST00000564606 CSMD3Q7Z407 3707 aa4.22□□□□□ -1.73
ATXN3-249ENST00000564606 DNAH6Q9C0G6 4158 aa4.22□□□□□ -1.73
ATXN3-249ENST00000564606 DNAH17Q9UFH2 4485 aa4.22□□□□□ -1.73
ATXN3-249ENST00000564606 PRKDCP78527 4128 aaKnown RBP4.21□□□□□ -1.74
ATXN3-249ENST00000564606 TGP01266 2768 aa4.2□□□□□ -1.74
ATXN3-249ENST00000564606 LCE5AQ5TCM9 118 aa4.18□□□□□ -1.74
ATXN3-249ENST00000564606 STARD9Q9P2P6 4700 aa4.17□□□□□ -1.74
ATXN3-249ENST00000564606 A0A1B0GU33 70 aa4.17□□□□□ -1.74
ATXN3-249ENST00000564606 ALMS1Q8TCU4 4167 aa4.17□□□□□ -1.74
ATXN3-249ENST00000564606 COX6B2Q6YFQ2 88 aa4.16□□□□□ -1.74
ATXN3-249ENST00000564606 KRTAP4-7Q9BYR0 210 aa4.15□□□□□ -1.75
ATXN3-249ENST00000564606 DNAH2Q9P225 4427 aa4.14□□□□□ -1.75
ATXN3-249ENST00000564606 C9orf92A6NGG3 77 aa4.13□□□□□ -1.75
ATXN3-249ENST00000564606 H1FX-AS1Q4G0G2 97 aa4.13□□□□□ -1.75
ATXN3-249ENST00000564606 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms