RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 LINC00313P59037 77 aa8.99□□□□□ -0.97
RNF40-206ENST00000564260 NDUFB1O75438 58 aa8.98□□□□□ -0.97
RNF40-206ENST00000564260 C20orf166-AS1Q96NR2 134 aa8.98□□□□□ -0.97
RNF40-206ENST00000564260 A0A1B0GVX0 72 aa8.97□□□□□ -0.97
RNF40-206ENST00000564260 DEFB116Q30KQ4 102 aa8.96□□□□□ -0.98
RNF40-206ENST00000564260 A8MWP4 228 aa8.95□□□□□ -0.98
RNF40-206ENST00000564260 A8MUU9 505 aa8.94□□□□□ -0.98
RNF40-206ENST00000564260 PCOTHQ58A44 107 aa8.93□□□□□ -0.98
RNF40-206ENST00000564260 IGHV6-1A0A0B4J1U7 121 aa8.92□□□□□ -0.98
RNF40-206ENST00000564260 DSCR10P59022 87 aa8.92□□□□□ -0.98
RNF40-206ENST00000564260 ATP11AUNQ6ZP68 121 aa8.92□□□□□ -0.98
RNF40-206ENST00000564260 KRTAP16-1A8MUX0 517 aa8.89□□□□□ -0.99
RNF40-206ENST00000564260 ETDBQ3ZM63 59 aa8.89□□□□□ -0.99
RNF40-206ENST00000564260 UBL5Q9BZL1 73 aa8.88□□□□□ -0.99
RNF40-206ENST00000564260 BPY2O14599 106 aa8.87□□□□□ -0.99
RNF40-206ENST00000564260 PRR15Q8IV56 129 aa8.87□□□□□ -0.99
RNF40-206ENST00000564260 Q6ZVQ6 151 aa8.86□□□□□ -0.99
RNF40-206ENST00000564260 IGKV3D-7A0A0C4DH55 119 aa8.85□□□□□ -0.99
RNF40-206ENST00000564260 NOTCH2NLQ7Z3S9 236 aa8.84□□□□□ -0.99
RNF40-206ENST00000564260 KRTAP4-1Q9BYQ7 146 aa8.83□□□□□ -1
RNF40-206ENST00000564260 C8orf17Q9NRJ1 99 aa8.83□□□□□ -1
RNF40-206ENST00000564260 LINC00846Q9NV44 126 aa8.82□□□□□ -1
RNF40-206ENST00000564260 ACYP1P07311 99 aa8.81□□□□□ -1
RNF40-206ENST00000564260 Q8N9P0 234 aaPredicted RBP8.8□□□□□ -1
RNF40-206ENST00000564260 FAM240AA0A1B0GVK7 77 aa8.78□□□□□ -1
RNF40-206ENST00000564260 K7EQZ3 153 aa8.77□□□□□ -1.01
RNF40-206ENST00000564260 TMEM254Q8TBM7 123 aa8.76□□□□□ -1.01
RNF40-206ENST00000564260 MMP24-AS1A0A0U1RRL7 71 aa8.75□□□□□ -1.01
RNF40-206ENST00000564260 A0A1B0GV90 55 aa8.75□□□□□ -1.01
RNF40-206ENST00000564260 CXCL6P80162 114 aa8.74□□□□□ -1.01
RNF40-206ENST00000564260 FAT4Q6V0I7 4981 aa8.72□□□□□ -1.01
RNF40-206ENST00000564260 hDV103S1A0JD37 113 aa8.72□□□□□ -1.01
RNF40-206ENST00000564260 MRPL34Q9BQ48 92 aaKnown RBP8.72□□□□□ -1.01
RNF40-206ENST00000564260 ZCCHC13Q8WW36 166 aaKnown RBP8.7□□□□□ -1.02
RNF40-206ENST00000564260 ATP5EP2Q5VTU8 51 aa8.67□□□□□ -1.02
RNF40-206ENST00000564260 LCE2AQ5TA79 106 aaPredicted RBP8.65□□□□□ -1.02
RNF40-206ENST00000564260 CASC2Q6XLA1 102 aa8.65□□□□□ -1.02
RNF40-206ENST00000564260 KRTAP19-2Q3LHN2 52 aa8.64□□□□□ -1.03
RNF40-206ENST00000564260 Q8N9L7 120 aa8.63□□□□□ -1.03
RNF40-206ENST00000564260 HCG22E2RYF7 251 aa8.62□□□□□ -1.03
RNF40-206ENST00000564260 J3QR89 54 aa8.62□□□□□ -1.03
RNF40-206ENST00000564260 LCE2CQ5TA81 110 aa8.6□□□□□ -1.03
RNF40-206ENST00000564260 NDUFS5O43920 106 aa8.58□□□□□ -1.04
RNF40-206ENST00000564260 COX6B2Q6YFQ2 88 aa8.58□□□□□ -1.04
RNF40-206ENST00000564260 WFDC13Q8IUB5 93 aa8.58□□□□□ -1.04
RNF40-206ENST00000564260 LINC00643Q86TS7 51 aa8.56□□□□□ -1.04
RNF40-206ENST00000564260 SPINK7P58062 85 aa8.54□□□□□ -1.04
RNF40-206ENST00000564260 RBM12B-AS1Q9P1G2 102 aa8.54□□□□□ -1.04
RNF40-206ENST00000564260 MPLKIPQ8TAP9 179 aa8.53□□□□□ -1.04
RNF40-206ENST00000564260 TP53AIP1Q9HCN2 124 aa8.53□□□□□ -1.04
RNF40-206ENST00000564260 HRES1P13985 223 aa8.51□□□□□ -1.05
RNF40-206ENST00000564260 MT1HP80294 61 aa8.49□□□□□ -1.05
RNF40-206ENST00000564260 FLGP20930 4061 aaPredicted RBP8.46□□□□□ -1.06
RNF40-206ENST00000564260 C7orf65Q6ZTY9 151 aa8.45□□□□□ -1.06
RNF40-206ENST00000564260 HIST1H4AP62805 103 aaKnown RBP8.43□□□□□ -1.06
RNF40-206ENST00000564260 Q5W150 140 aa8.43□□□□□ -1.06
RNF40-206ENST00000564260 FAM236DA0A1B0GTK5 79 aa8.42□□□□□ -1.06
RNF40-206ENST00000564260 FAM236CP0DP71 79 aa8.42□□□□□ -1.06
RNF40-206ENST00000564260 K7ERU9 68 aa8.41□□□□□ -1.06
RNF40-206ENST00000564260 M0R2T5 61 aa8.37□□□□□ -1.07
RNF40-206ENST00000564260 IGKV2D-30A0A075B6S6 120 aa8.36□□□□□ -1.07
RNF40-206ENST00000564260 IGKV2-30P06310 120 aa8.36□□□□□ -1.07
RNF40-206ENST00000564260 TRAV22A0A0B4J277 110 aa8.32□□□□□ -1.08
RNF40-206ENST00000564260 UQCRQO14949 82 aa8.32□□□□□ -1.08
RNF40-206ENST00000564260 IMUPQ9GZP8 106 aa8.31□□□□□ -1.08
RNF40-206ENST00000564260 A0A087WVE0 104 aa8.3□□□□□ -1.08
RNF40-206ENST00000564260 ATOX1O00244 68 aa8.3□□□□□ -1.08
RNF40-206ENST00000564260 LORP23490 312 aaPredicted RBP8.29□□□□□ -1.08
RNF40-206ENST00000564260 KRTAP10-6P60371 365 aaPredicted RBP8.28□□□□□ -1.08
RNF40-206ENST00000564260 LOC101927531A0A1B0GV80 90 aa8.27□□□□□ -1.09
RNF40-206ENST00000564260 H1FX-AS1Q4G0G2 97 aa8.24□□□□□ -1.09
RNF40-206ENST00000564260 OCR1Q9BZK8 76 aa8.21□□□□□ -1.1
RNF40-206ENST00000564260 CYP4F30PQ9H0H9 118 aa8.21□□□□□ -1.1
RNF40-206ENST00000564260 H0Y9P7 68 aa8.19□□□□□ -1.1
RNF40-206ENST00000564260 C4orf26Q17RF5 130 aa8.18□□□□□ -1.1
RNF40-206ENST00000564260 SCGB1A1P11684 91 aa8.17□□□□□ -1.1
RNF40-206ENST00000564260 MP68P56378 58 aa8.17□□□□□ -1.1
RNF40-206ENST00000564260 C5orf47Q569G3 176 aa8.17□□□□□ -1.1
RNF40-206ENST00000564260 H3BPC8 53 aa8.15□□□□□ -1.1
RNF40-206ENST00000564260 LCE2DQ5TA82 110 aaPredicted RBP8.15□□□□□ -1.1
RNF40-206ENST00000564260 MT-ATP8P03928 68 aa8.14□□□□□ -1.11
RNF40-206ENST00000564260 SMIM20Q8N5G0 67 aa8.13□□□□□ -1.11
RNF40-206ENST00000564260 C1orf64Q8NEQ6 169 aa8.12□□□□□ -1.11
RNF40-206ENST00000564260 KRTAP9-2Q9BYQ4 174 aa8.1□□□□□ -1.11
RNF40-206ENST00000564260 KRTAP9-8Q9BYQ0 159 aa8.09□□□□□ -1.11
RNF40-206ENST00000564260 LINC00208Q96KT6 92 aa8.08□□□□□ -1.12
RNF40-206ENST00000564260 KRTAP3-1Q9BYR8 98 aa8.06□□□□□ -1.12
RNF40-206ENST00000564260 FAM236AA0A1B0GUQ0 79 aa8.03□□□□□ -1.12
RNF40-206ENST00000564260 FAM236BA0A1B0GV22 79 aa8.03□□□□□ -1.12
RNF40-206ENST00000564260 A8MUN3 132 aa8.03□□□□□ -1.12
RNF40-206ENST00000564260 TRAV7A0A075B6U4 112 aa8.01□□□□□ -1.13
RNF40-206ENST00000564260 S4R3F8 94 aa8.01□□□□□ -1.13
RNF40-206ENST00000564260 MT2AP02795 61 aa7.99□□□□□ -1.13
RNF40-206ENST00000564260 KLKP1Q107X0 134 aa7.94□□□□□ -1.14
RNF40-206ENST00000564260 CSAG1Q6PB30 78 aa7.94□□□□□ -1.14
RNF40-206ENST00000564260 KRTAP10-10P60014 251 aa7.92□□□□□ -1.14
RNF40-206ENST00000564260 LCA10Q71F78 164 aa7.92□□□□□ -1.14
RNF40-206ENST00000564260 MT1FP04733 61 aa7.91□□□□□ -1.14
RNF40-206ENST00000564260 SERP2Q8N6R1 65 aa7.86□□□□□ -1.15
RNF40-206ENST00000564260 DMAC1Q96GE9 116 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms