RNA–Protein interactions for RNA: ENST00000564051.2

AL109954.1-202, humanhuman

BASIC

Gene AL109954.1, Length 2,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL109954.1-202ENST00000564051 LINC00336Q6ZUF6 198 aa9.22□□□□□ -0.93
AL109954.1-202ENST00000564051 Q1T7F1 81 aa9.2□□□□□ -0.94
AL109954.1-202ENST00000564051 NDUFS5O43920 106 aa9.2□□□□□ -0.94
AL109954.1-202ENST00000564051 A0A087X002 238 aa9.19□□□□□ -0.94
AL109954.1-202ENST00000564051 NOTCH2NLQ7Z3S9 236 aa9.19□□□□□ -0.94
AL109954.1-202ENST00000564051 KRTAP10-1P60331 282 aa9.17□□□□□ -0.94
AL109954.1-202ENST00000564051 SPINK6Q6UWN8 80 aa9.17□□□□□ -0.94
AL109954.1-202ENST00000564051 IGLV7-46A0A075B6I9 117 aa9.17□□□□□ -0.94
AL109954.1-202ENST00000564051 PKD1P98161 4303 aa9.15□□□□□ -0.94
AL109954.1-202ENST00000564051 PRO0628Q9UI54 55 aa9.14□□□□□ -0.95
AL109954.1-202ENST00000564051 FAT2Q9NYQ8 4349 aa9.13□□□□□ -0.95
AL109954.1-202ENST00000564051 C8orf87E5RJ46 101 aa9.13□□□□□ -0.95
AL109954.1-202ENST00000564051 PCOTHQ58A44 107 aa9.12□□□□□ -0.95
AL109954.1-202ENST00000564051 KRTAP13-2Q52LG2 175 aa9.11□□□□□ -0.95
AL109954.1-202ENST00000564051 V9GYY9 64 aa9.11□□□□□ -0.95
AL109954.1-202ENST00000564051 KRTAP21-3Q3LHN1 58 aa9.1□□□□□ -0.95
AL109954.1-202ENST00000564051 LRP1BQ9NZR2 4599 aa9.1□□□□□ -0.95
AL109954.1-202ENST00000564051 HYDINQ4G0P3 5121 aa9.08□□□□□ -0.96
AL109954.1-202ENST00000564051 LOC101927531A0A1B0GV80 90 aa9.07□□□□□ -0.96
AL109954.1-202ENST00000564051 BRK1Q8WUW1 75 aa9.07□□□□□ -0.96
AL109954.1-202ENST00000564051 KRTAP13-3Q3SY46 172 aa9.06□□□□□ -0.96
AL109954.1-202ENST00000564051 COA5Q86WW8 74 aa9.06□□□□□ -0.96
AL109954.1-202ENST00000564051 KRTAP1-4P0C5Y4 121 aa9.05□□□□□ -0.96
AL109954.1-202ENST00000564051 C1orf195Q5TG92 126 aa9.05□□□□□ -0.96
AL109954.1-202ENST00000564051 Q5W150 140 aa9.04□□□□□ -0.96
AL109954.1-202ENST00000564051 LINC00313P59037 77 aa9.03□□□□□ -0.96
AL109954.1-202ENST00000564051 PSPHP1O15172 72 aa9.02□□□□□ -0.97
AL109954.1-202ENST00000564051 Q8N9P0 234 aaPredicted RBP9.02□□□□□ -0.97
AL109954.1-202ENST00000564051 LIMD2Q9BT23 127 aa9.01□□□□□ -0.97
AL109954.1-202ENST00000564051 VPS13BQ7Z7G8 4022 aa8.98□□□□□ -0.97
AL109954.1-202ENST00000564051 A8MUN3 132 aa8.98□□□□□ -0.97
AL109954.1-202ENST00000564051 FAM229AH3BQW9 127 aa8.96□□□□□ -0.98
AL109954.1-202ENST00000564051 PLA2G1BP04054 148 aaKnown RBP8.95□□□□□ -0.98
AL109954.1-202ENST00000564051 HRES1P13985 223 aa8.94□□□□□ -0.98
AL109954.1-202ENST00000564051 Q5VV11 94 aa8.94□□□□□ -0.98
AL109954.1-202ENST00000564051 C4orf48Q5BLP8 95 aa8.93□□□□□ -0.98
AL109954.1-202ENST00000564051 TYMSOSQ8TAI1 123 aa8.93□□□□□ -0.98
AL109954.1-202ENST00000564051 KRTAP16-1A8MUX0 517 aa8.92□□□□□ -0.98
AL109954.1-202ENST00000564051 SPINK1P00995 79 aa8.91□□□□□ -0.98
AL109954.1-202ENST00000564051 PRR15LQ9BU68 103 aa8.9□□□□□ -0.99
AL109954.1-202ENST00000564051 SACSQ9NZJ4 4579 aa8.9□□□□□ -0.99
AL109954.1-202ENST00000564051 IGKV2-30P06310 120 aa8.87□□□□□ -0.99
AL109954.1-202ENST00000564051 PKHD1P08F94 4074 aa8.86□□□□□ -0.99
AL109954.1-202ENST00000564051 LINC01558Q9Y6Z2 57 aa8.86□□□□□ -0.99
AL109954.1-202ENST00000564051 Q75L30 129 aa8.85□□□□□ -0.99
AL109954.1-202ENST00000564051 ACYP2P14621 99 aa8.84□□□□□ -0.99
AL109954.1-202ENST00000564051 CHKB-CPT1BH3BT56 60 aa8.84□□□□□ -0.99
AL109954.1-202ENST00000564051 RPS29P62273 56 aaKnown RBP8.84□□□□□ -0.99
AL109954.1-202ENST00000564051 RETNLBQ9BQ08 111 aa8.84□□□□□ -0.99
AL109954.1-202ENST00000564051 SPAG11AQ6PDA7 123 aa8.83□□□□□ -1
AL109954.1-202ENST00000564051 DMAC1Q96GE9 116 aa8.83□□□□□ -1
AL109954.1-202ENST00000564051 LINC00304Q8N9R0 145 aa8.81□□□□□ -1
AL109954.1-202ENST00000564051 PRR26Q8N8Z3 221 aa8.8□□□□□ -1
AL109954.1-202ENST00000564051 DYNC1H1Q14204 4646 aaKnown RBP8.79□□□□□ -1
AL109954.1-202ENST00000564051 A0A1B0GVY2 172 aa8.78□□□□□ -1
AL109954.1-202ENST00000564051 SMR3BP02814 79 aaPredicted RBP8.75□□□□□ -1.01
AL109954.1-202ENST00000564051 A6NED7 52 aa8.73□□□□□ -1.01
AL109954.1-202ENST00000564051 IGKV2D-30A0A075B6S6 120 aa8.72□□□□□ -1.01
AL109954.1-202ENST00000564051 A8MU10 97 aa8.71□□□□□ -1.02
AL109954.1-202ENST00000564051 KRTAP10-4P60372 401 aaPredicted RBP8.71□□□□□ -1.02
AL109954.1-202ENST00000564051 APOBP04114 4563 aaKnown RBP8.7□□□□□ -1.02
AL109954.1-202ENST00000564051 LCA10Q71F78 164 aa8.68□□□□□ -1.02
AL109954.1-202ENST00000564051 PKHD1L1Q86WI1 4243 aa8.66□□□□□ -1.02
AL109954.1-202ENST00000564051 CDC42SE1Q9NRR8 79 aa8.66□□□□□ -1.02
AL109954.1-202ENST00000564051 FAT1Q14517 4588 aa8.64□□□□□ -1.03
AL109954.1-202ENST00000564051 C7orf65Q6ZTY9 151 aa8.64□□□□□ -1.03
AL109954.1-202ENST00000564051 ATP11AUNQ6ZP68 121 aa8.62□□□□□ -1.03
AL109954.1-202ENST00000564051 SPINK7P58062 85 aa8.61□□□□□ -1.03
AL109954.1-202ENST00000564051 RYR2Q92736 4967 aa8.6□□□□□ -1.03
AL109954.1-202ENST00000564051 C20orf166-AS1Q96NR2 134 aa8.59□□□□□ -1.03
AL109954.1-202ENST00000564051 A8MUU9 505 aa8.58□□□□□ -1.04
AL109954.1-202ENST00000564051 PMAIP1Q13794 54 aa8.57□□□□□ -1.04
AL109954.1-202ENST00000564051 SPTSSBQ8NFR3 76 aa8.56□□□□□ -1.04
AL109954.1-202ENST00000564051 A0A1B0GU69 56 aa8.55□□□□□ -1.04
AL109954.1-202ENST00000564051 C9orf92A6NGG3 77 aa8.55□□□□□ -1.04
AL109954.1-202ENST00000564051 Q8N1X5 172 aa8.48□□□□□ -1.05
AL109954.1-202ENST00000564051 KMT2CQ8NEZ4 4911 aaKnown RBP8.46□□□□□ -1.05
AL109954.1-202ENST00000564051 A6NN06 94 aa8.45□□□□□ -1.06
AL109954.1-202ENST00000564051 FLG2Q5D862 2391 aaPredicted RBP8.44□□□□□ -1.06
AL109954.1-202ENST00000564051 SPATA8Q6RVD6 105 aa8.39□□□□□ -1.07
AL109954.1-202ENST00000564051 UQCR11O14957 56 aa8.39□□□□□ -1.07
AL109954.1-202ENST00000564051 KTN1-AS1Q86SY8 53 aa8.39□□□□□ -1.07
AL109954.1-202ENST00000564051 KRTAP10-8P60410 259 aa8.38□□□□□ -1.07
AL109954.1-202ENST00000564051 Q5VSD8 79 aa8.36□□□□□ -1.07
AL109954.1-202ENST00000564051 FAT3Q8TDW7 4589 aa8.35□□□□□ -1.07
AL109954.1-202ENST00000564051 KRTAP3-1Q9BYR8 98 aa8.35□□□□□ -1.07
AL109954.1-202ENST00000564051 TNXBP22105 4242 aa8.35□□□□□ -1.07
AL109954.1-202ENST00000564051 MIR22HGQ0VDD5 57 aa8.34□□□□□ -1.07
AL109954.1-202ENST00000564051 HSPG2P98160 4391 aa8.33□□□□□ -1.08
AL109954.1-202ENST00000564051 SEC61GP60059 68 aa8.33□□□□□ -1.08
AL109954.1-202ENST00000564051 LRP1Q07954 4544 aaKnown RBP8.31□□□□□ -1.08
AL109954.1-202ENST00000564051 COX6B2Q6YFQ2 88 aa8.27□□□□□ -1.09
AL109954.1-202ENST00000564051 RYR1P21817 5038 aa8.23□□□□□ -1.09
AL109954.1-202ENST00000564051 RPL37P61927 97 aaKnown RBP8.21□□□□□ -1.09
AL109954.1-202ENST00000564051 RYR3Q15413 4870 aa8.2□□□□□ -1.1
AL109954.1-202ENST00000564051 XP32Q5T750 250 aa8.17□□□□□ -1.1
AL109954.1-202ENST00000564051 DMBT1Q9UGM3 2413 aaPredicted RBP8.15□□□□□ -1.1
AL109954.1-202ENST00000564051 KRTAP17-1Q9BYP8 105 aa8.15□□□□□ -1.1
AL109954.1-202ENST00000564051 MT1HL1P0DM35 61 aa8.12□□□□□ -1.11
AL109954.1-202ENST00000564051 A0A1B0GU33 70 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms