RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 TRAV7A0A075B6U4 112 aa9.87□□□□□ -0.83
SPSB3-202ENST00000563668 PRR4Q16378 134 aa9.85□□□□□ -0.83
SPSB3-202ENST00000563668 K7EQZ3 153 aa9.82□□□□□ -0.84
SPSB3-202ENST00000563668 LINC00304Q8N9R0 145 aa9.82□□□□□ -0.84
SPSB3-202ENST00000563668 MOBPQ13875 183 aa9.82□□□□□ -0.84
SPSB3-202ENST00000563668 LINC00472Q9H8W2 130 aa9.82□□□□□ -0.84
SPSB3-202ENST00000563668 DEFB116Q30KQ4 102 aa9.8□□□□□ -0.84
SPSB3-202ENST00000563668 RETNLBQ9BQ08 111 aa9.8□□□□□ -0.84
SPSB3-202ENST00000563668 OCR1Q9BZK8 76 aa9.76□□□□□ -0.85
SPSB3-202ENST00000563668 CYSTM1Q9H1C7 97 aa9.76□□□□□ -0.85
SPSB3-202ENST00000563668 J3KT08 172 aa9.74□□□□□ -0.85
SPSB3-202ENST00000563668 SS18L2Q9UHA2 77 aa9.74□□□□□ -0.85
SPSB3-202ENST00000563668 A8MWP4 228 aa9.73□□□□□ -0.85
SPSB3-202ENST00000563668 HCG22E2RYF7 251 aa9.73□□□□□ -0.85
SPSB3-202ENST00000563668 Q96NJ1 140 aa9.73□□□□□ -0.85
SPSB3-202ENST00000563668 HRCT1Q6UXD1 115 aa9.72□□□□□ -0.85
SPSB3-202ENST00000563668 C20orf197Q8N268 126 aa9.72□□□□□ -0.85
SPSB3-202ENST00000563668 PRR15Q8IV56 129 aa9.72□□□□□ -0.85
SPSB3-202ENST00000563668 SSBP3-AS1Q7Z2R9 100 aa9.71□□□□□ -0.86
SPSB3-202ENST00000563668 CD164Q04900 197 aa9.68□□□□□ -0.86
SPSB3-202ENST00000563668 KLKP1Q107X0 134 aa9.67□□□□□ -0.86
SPSB3-202ENST00000563668 SPAG11AQ6PDA7 123 aa9.66□□□□□ -0.86
SPSB3-202ENST00000563668 MUC2Q02817 5179 aa9.66□□□□□ -0.86
SPSB3-202ENST00000563668 WFDC13Q8IUB5 93 aa9.65□□□□□ -0.86
SPSB3-202ENST00000563668 TMEM258P61165 79 aa9.64□□□□□ -0.87
SPSB3-202ENST00000563668 C4orf48Q5BLP8 95 aa9.64□□□□□ -0.87
SPSB3-202ENST00000563668 IGLV7-46A0A075B6I9 117 aa9.63□□□□□ -0.87
SPSB3-202ENST00000563668 NDUFB1O75438 58 aa9.63□□□□□ -0.87
SPSB3-202ENST00000563668 TMEM254Q8TBM7 123 aa9.63□□□□□ -0.87
SPSB3-202ENST00000563668 SNURFQ9Y675 71 aa9.62□□□□□ -0.87
SPSB3-202ENST00000563668 CASC2Q6XLA1 102 aa9.61□□□□□ -0.87
SPSB3-202ENST00000563668 MMP24-AS1A0A0U1RRL7 71 aa9.61□□□□□ -0.87
SPSB3-202ENST00000563668 A0A0U1RQV1 116 aa9.6□□□□□ -0.87
SPSB3-202ENST00000563668 SPINK1P00995 79 aa9.6□□□□□ -0.87
SPSB3-202ENST00000563668 H7BZZ5 65 aa9.59□□□□□ -0.87
SPSB3-202ENST00000563668 TPRXLQ17RH7 258 aa9.58□□□□□ -0.88
SPSB3-202ENST00000563668 ASB16-AS1Q495Z4 193 aa9.58□□□□□ -0.88
SPSB3-202ENST00000563668 A0A1B0GVX0 72 aa9.56□□□□□ -0.88
SPSB3-202ENST00000563668 NDUFC1O43677 76 aa9.56□□□□□ -0.88
SPSB3-202ENST00000563668 MUC17Q685J3 4493 aa9.56□□□□□ -0.88
SPSB3-202ENST00000563668 C8orf17Q9NRJ1 99 aa9.55□□□□□ -0.88
SPSB3-202ENST00000563668 C5orf47Q569G3 176 aa9.54□□□□□ -0.88
SPSB3-202ENST00000563668 Q5XG85 94 aa9.54□□□□□ -0.88
SPSB3-202ENST00000563668 hDV103S1A0JD37 113 aa9.53□□□□□ -0.88
SPSB3-202ENST00000563668 FP248Q71RG6 208 aaPredicted RBP9.52□□□□□ -0.88
SPSB3-202ENST00000563668 IGHV6-1A0A0B4J1U7 121 aa9.51□□□□□ -0.89
SPSB3-202ENST00000563668 RPS29P62273 56 aaKnown RBP9.51□□□□□ -0.89
SPSB3-202ENST00000563668 ZCCHC13Q8WW36 166 aaKnown RBP9.51□□□□□ -0.89
SPSB3-202ENST00000563668 KRTAP13-3Q3SY46 172 aa9.5□□□□□ -0.89
SPSB3-202ENST00000563668 FAM236DA0A1B0GTK5 79 aa9.49□□□□□ -0.89
SPSB3-202ENST00000563668 FAM236CP0DP71 79 aa9.49□□□□□ -0.89
SPSB3-202ENST00000563668 NOTCH2NLQ7Z3S9 236 aa9.46□□□□□ -0.9
SPSB3-202ENST00000563668 MP68P56378 58 aa9.45□□□□□ -0.9
SPSB3-202ENST00000563668 RPS28P62857 69 aaKnown RBP9.45□□□□□ -0.9
SPSB3-202ENST00000563668 C1orf195Q5TG92 126 aa9.45□□□□□ -0.9
SPSB3-202ENST00000563668 LIMD2Q9BT23 127 aa9.44□□□□□ -0.9
SPSB3-202ENST00000563668 MRPL34Q9BQ48 92 aaKnown RBP9.43□□□□□ -0.9
SPSB3-202ENST00000563668 H0Y9P7 68 aa9.42□□□□□ -0.9
SPSB3-202ENST00000563668 H3BPC8 53 aa9.42□□□□□ -0.9
SPSB3-202ENST00000563668 TP53AIP1Q9HCN2 124 aa9.42□□□□□ -0.9
SPSB3-202ENST00000563668 C8orf87E5RJ46 101 aa9.41□□□□□ -0.9
SPSB3-202ENST00000563668 ATP5EP56381 51 aaPredicted RBP9.41□□□□□ -0.9
SPSB3-202ENST00000563668 TRAV22A0A0B4J277 110 aa9.38□□□□□ -0.91
SPSB3-202ENST00000563668 LINC00208Q96KT6 92 aa9.38□□□□□ -0.91
SPSB3-202ENST00000563668 FAT4Q6V0I7 4981 aa9.38□□□□□ -0.91
SPSB3-202ENST00000563668 SERP1Q9Y6X1 66 aa9.35□□□□□ -0.91
SPSB3-202ENST00000563668 NDUFS5O43920 106 aa9.34□□□□□ -0.91
SPSB3-202ENST00000563668 KRTAP4-1Q9BYQ7 146 aa9.34□□□□□ -0.91
SPSB3-202ENST00000563668 LINC00313P59037 77 aa9.32□□□□□ -0.92
SPSB3-202ENST00000563668 XP32Q5T750 250 aa9.32□□□□□ -0.92
SPSB3-202ENST00000563668 C1orf64Q8NEQ6 169 aa9.32□□□□□ -0.92
SPSB3-202ENST00000563668 C9orf92A6NGG3 77 aa9.28□□□□□ -0.92
SPSB3-202ENST00000563668 KRTAP16-1A8MUX0 517 aa9.26□□□□□ -0.93
SPSB3-202ENST00000563668 Q8N9P0 234 aaPredicted RBP9.26□□□□□ -0.93
SPSB3-202ENST00000563668 SEC61BP60468 96 aaKnown RBP9.25□□□□□ -0.93
SPSB3-202ENST00000563668 LCE2AQ5TA79 106 aaPredicted RBP9.25□□□□□ -0.93
SPSB3-202ENST00000563668 CYP4F30PQ9H0H9 118 aa9.24□□□□□ -0.93
SPSB3-202ENST00000563668 SPANXA2-OT1Q8N9U9 137 aa9.23□□□□□ -0.93
SPSB3-202ENST00000563668 Q5W150 140 aa9.22□□□□□ -0.93
SPSB3-202ENST00000563668 LOC101927531A0A1B0GV80 90 aa9.18□□□□□ -0.94
SPSB3-202ENST00000563668 PCOTHQ58A44 107 aa9.16□□□□□ -0.94
SPSB3-202ENST00000563668 SMIM26A0A096LP01 95 aa9.14□□□□□ -0.95
SPSB3-202ENST00000563668 RPL37P61927 97 aaKnown RBP9.06□□□□□ -0.96
SPSB3-202ENST00000563668 KRTAP19-2Q3LHN2 52 aa9.06□□□□□ -0.96
SPSB3-202ENST00000563668 IGKV2-30P06310 120 aa9.05□□□□□ -0.96
SPSB3-202ENST00000563668 LCE2CQ5TA81 110 aa9.05□□□□□ -0.96
SPSB3-202ENST00000563668 A8MUU9 505 aa8.99□□□□□ -0.97
SPSB3-202ENST00000563668 C20orf166-AS1Q96NR2 134 aa8.99□□□□□ -0.97
SPSB3-202ENST00000563668 C4orf26Q17RF5 130 aa8.98□□□□□ -0.97
SPSB3-202ENST00000563668 HRES1P13985 223 aa8.96□□□□□ -0.97
SPSB3-202ENST00000563668 COA5Q86WW8 74 aa8.96□□□□□ -0.97
SPSB3-202ENST00000563668 KRTAP9-2Q9BYQ4 174 aa8.95□□□□□ -0.98
SPSB3-202ENST00000563668 IGKV2D-30A0A075B6S6 120 aa8.93□□□□□ -0.98
SPSB3-202ENST00000563668 Q75L30 129 aa8.91□□□□□ -0.98
SPSB3-202ENST00000563668 MPLKIPQ8TAP9 179 aa8.91□□□□□ -0.98
SPSB3-202ENST00000563668 MT1HP80294 61 aa8.9□□□□□ -0.98
SPSB3-202ENST00000563668 Q1T7F1 81 aa8.9□□□□□ -0.98
SPSB3-202ENST00000563668 DMAC1Q96GE9 116 aa8.89□□□□□ -0.99
SPSB3-202ENST00000563668 C7orf65Q6ZTY9 151 aa8.87□□□□□ -0.99
SPSB3-202ENST00000563668 ATP11AUNQ6ZP68 121 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms