RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 RPS29P62273 56 aaKnown RBP5.81□□□□□ -1.48
SMG1-208ENST00000563448 DEFB116Q30KQ4 102 aa5.81□□□□□ -1.48
SMG1-208ENST00000563448 KRTAP29-1A8MX34 341 aaPredicted RBP5.81□□□□□ -1.48
SMG1-208ENST00000563448 ASB16-AS1Q495Z4 193 aa5.81□□□□□ -1.48
SMG1-208ENST00000563448 LIMD2Q9BT23 127 aa5.81□□□□□ -1.48
SMG1-208ENST00000563448 IGKV3D-7A0A0C4DH55 119 aa5.79□□□□□ -1.48
SMG1-208ENST00000563448 BPY2O14599 106 aa5.78□□□□□ -1.48
SMG1-208ENST00000563448 C1orf195Q5TG92 126 aa5.77□□□□□ -1.49
SMG1-208ENST00000563448 DSCR10P59022 87 aa5.77□□□□□ -1.49
SMG1-208ENST00000563448 CXCL6P80162 114 aa5.77□□□□□ -1.49
SMG1-208ENST00000563448 IGKV4-1P06312 121 aa5.76□□□□□ -1.49
SMG1-208ENST00000563448 TRAV7A0A075B6U4 112 aa5.75□□□□□ -1.49
SMG1-208ENST00000563448 NDUFC1O43677 76 aa5.75□□□□□ -1.49
SMG1-208ENST00000563448 SERP1Q9Y6X1 66 aa5.75□□□□□ -1.49
SMG1-208ENST00000563448 A0A087WVE0 104 aa5.74□□□□□ -1.49
SMG1-208ENST00000563448 CYSTM1Q9H1C7 97 aa5.74□□□□□ -1.49
SMG1-208ENST00000563448 DMBT1Q9UGM3 2413 aaPredicted RBP5.74□□□□□ -1.49
SMG1-208ENST00000563448 FAM236DA0A1B0GTK5 79 aa5.74□□□□□ -1.49
SMG1-208ENST00000563448 FAM236CP0DP71 79 aa5.74□□□□□ -1.49
SMG1-208ENST00000563448 ATP5EP56381 51 aaPredicted RBP5.74□□□□□ -1.49
SMG1-208ENST00000563448 Q8N9L7 120 aa5.74□□□□□ -1.49
SMG1-208ENST00000563448 K7EQZ3 153 aa5.72□□□□□ -1.49
SMG1-208ENST00000563448 KLKP1Q107X0 134 aa5.72□□□□□ -1.49
SMG1-208ENST00000563448 C4orf26Q17RF5 130 aa5.72□□□□□ -1.49
SMG1-208ENST00000563448 RETNLBQ9BQ08 111 aa5.72□□□□□ -1.49
SMG1-208ENST00000563448 A8MWP4 228 aa5.72□□□□□ -1.49
SMG1-208ENST00000563448 J3QL48 77 aa5.71□□□□□ -1.5
SMG1-208ENST00000563448 PRR15Q8IV56 129 aa5.7□□□□□ -1.5
SMG1-208ENST00000563448 C20orf197Q8N268 126 aa5.7□□□□□ -1.5
SMG1-208ENST00000563448 SMIM26A0A096LP01 95 aa5.69□□□□□ -1.5
SMG1-208ENST00000563448 A0A1B0GVX0 72 aa5.69□□□□□ -1.5
SMG1-208ENST00000563448 NDUFB1O75438 58 aa5.69□□□□□ -1.5
SMG1-208ENST00000563448 H7BZZ5 65 aa5.68□□□□□ -1.5
SMG1-208ENST00000563448 PRO0628Q9UI54 55 aa5.68□□□□□ -1.5
SMG1-208ENST00000563448 IGHV6-1A0A0B4J1U7 121 aa5.67□□□□□ -1.5
SMG1-208ENST00000563448 NOTCH2NLQ7Z3S9 236 aa5.65□□□□□ -1.5
SMG1-208ENST00000563448 MMP24-AS1A0A0U1RRL7 71 aa5.65□□□□□ -1.51
SMG1-208ENST00000563448 C8orf17Q9NRJ1 99 aa5.65□□□□□ -1.51
SMG1-208ENST00000563448 FP248Q71RG6 208 aaPredicted RBP5.64□□□□□ -1.51
SMG1-208ENST00000563448 HCG22E2RYF7 251 aa5.63□□□□□ -1.51
SMG1-208ENST00000563448 C8orf87E5RJ46 101 aa5.63□□□□□ -1.51
SMG1-208ENST00000563448 WFDC13Q8IUB5 93 aa5.63□□□□□ -1.51
SMG1-208ENST00000563448 LINC00313P59037 77 aa5.62□□□□□ -1.51
SMG1-208ENST00000563448 IGLV7-46A0A075B6I9 117 aa5.6□□□□□ -1.51
SMG1-208ENST00000563448 PRR4Q16378 134 aa5.6□□□□□ -1.51
SMG1-208ENST00000563448 CASC2Q6XLA1 102 aa5.6□□□□□ -1.51
SMG1-208ENST00000563448 hDV103S1A0JD37 113 aa5.6□□□□□ -1.51
SMG1-208ENST00000563448 C9orf92A6NGG3 77 aa5.6□□□□□ -1.51
SMG1-208ENST00000563448 KRTAP16-1A8MUX0 517 aa5.59□□□□□ -1.51
SMG1-208ENST00000563448 HERC1Q15751 4861 aa5.59□□□□□ -1.51
SMG1-208ENST00000563448 TMEM254Q8TBM7 123 aa5.58□□□□□ -1.52
SMG1-208ENST00000563448 MRPL34Q9BQ48 92 aaKnown RBP5.57□□□□□ -1.52
SMG1-208ENST00000563448 KRTAP13-3Q3SY46 172 aa5.57□□□□□ -1.52
SMG1-208ENST00000563448 SNURFQ9Y675 71 aa5.55□□□□□ -1.52
SMG1-208ENST00000563448 Q8N9P0 234 aaPredicted RBP5.53□□□□□ -1.52
SMG1-208ENST00000563448 TPRXLQ17RH7 258 aa5.53□□□□□ -1.52
SMG1-208ENST00000563448 A0A0U1RQV1 116 aa5.52□□□□□ -1.53
SMG1-208ENST00000563448 NDUFS5O43920 106 aa5.52□□□□□ -1.53
SMG1-208ENST00000563448 OCR1Q9BZK8 76 aa5.52□□□□□ -1.53
SMG1-208ENST00000563448 XP32Q5T750 250 aa5.51□□□□□ -1.53
SMG1-208ENST00000563448 C20orf166-AS1Q96NR2 134 aa5.51□□□□□ -1.53
SMG1-208ENST00000563448 A8MUU9 505 aa5.5□□□□□ -1.53
SMG1-208ENST00000563448 V9GYY9 64 aa5.5□□□□□ -1.53
SMG1-208ENST00000563448 LPAP08519 4548 aa5.49□□□□□ -1.53
SMG1-208ENST00000563448 SEC61GP60059 68 aa5.48□□□□□ -1.53
SMG1-208ENST00000563448 LCE2DQ5TA82 110 aaPredicted RBP5.48□□□□□ -1.53
SMG1-208ENST00000563448 Q75L30 129 aa5.47□□□□□ -1.53
SMG1-208ENST00000563448 TP53AIP1Q9HCN2 124 aa5.47□□□□□ -1.53
SMG1-208ENST00000563448 BRK1Q8WUW1 75 aa5.47□□□□□ -1.53
SMG1-208ENST00000563448 RPL37P61927 97 aaKnown RBP5.45□□□□□ -1.54
SMG1-208ENST00000563448 Q5W150 140 aa5.45□□□□□ -1.54
SMG1-208ENST00000563448 Q1T7F1 81 aa5.44□□□□□ -1.54
SMG1-208ENST00000563448 ZCCHC13Q8WW36 166 aaKnown RBP5.43□□□□□ -1.54
SMG1-208ENST00000563448 LRP2P98164 4655 aa5.42□□□□□ -1.54
SMG1-208ENST00000563448 TRAV22A0A0B4J277 110 aa5.41□□□□□ -1.54
SMG1-208ENST00000563448 HMCN2Q8NDA2 5059 aa5.41□□□□□ -1.54
SMG1-208ENST00000563448 H0Y9P7 68 aa5.41□□□□□ -1.54
SMG1-208ENST00000563448 MPLKIPQ8TAP9 179 aa5.41□□□□□ -1.54
SMG1-208ENST00000563448 CYP4F30PQ9H0H9 118 aa5.41□□□□□ -1.54
SMG1-208ENST00000563448 ATP11AUNQ6ZP68 121 aa5.39□□□□□ -1.55
SMG1-208ENST00000563448 MP68P56378 58 aa5.37□□□□□ -1.55
SMG1-208ENST00000563448 H3BPC8 53 aa5.36□□□□□ -1.55
SMG1-208ENST00000563448 PCOTHQ58A44 107 aa5.36□□□□□ -1.55
SMG1-208ENST00000563448 LINC00208Q96KT6 92 aa5.36□□□□□ -1.55
SMG1-208ENST00000563448 PMAIP1Q13794 54 aa5.36□□□□□ -1.55
SMG1-208ENST00000563448 C1orf64Q8NEQ6 169 aa5.36□□□□□ -1.55
SMG1-208ENST00000563448 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
SMG1-208ENST00000563448 IGKV2-30P06310 120 aa5.34□□□□□ -1.55
SMG1-208ENST00000563448 SEC61BP60468 96 aaKnown RBP5.33□□□□□ -1.56
SMG1-208ENST00000563448 SPANXA2-OT1Q8N9U9 137 aa5.33□□□□□ -1.56
SMG1-208ENST00000563448 LOC101927531A0A1B0GV80 90 aa5.33□□□□□ -1.56
SMG1-208ENST00000563448 IGKV2D-30A0A075B6S6 120 aa5.32□□□□□ -1.56
SMG1-208ENST00000563448 SPINK7P58062 85 aa5.3□□□□□ -1.56
SMG1-208ENST00000563448 C7orf65Q6ZTY9 151 aa5.3□□□□□ -1.56
SMG1-208ENST00000563448 KRTAP4-1Q9BYQ7 146 aa5.28□□□□□ -1.56
SMG1-208ENST00000563448 KRTAP3-3Q9BYR6 98 aa5.27□□□□□ -1.57
SMG1-208ENST00000563448 KRTAP3-2Q9BYR7 98 aa5.27□□□□□ -1.57
SMG1-208ENST00000563448 UBR4Q5T4S7 5183 aa5.27□□□□□ -1.57
SMG1-208ENST00000563448 PSPHP1O15172 72 aa5.24□□□□□ -1.57
SMG1-208ENST00000563448 HRES1P13985 223 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms