RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 COX6B2Q6YFQ2 88 aa14.66□□□□□ -0.06
NME3-203ENST00000563367 C14orf132Q9NPU4 83 aa14.66□□□□□ -0.06
NME3-203ENST00000563367 A0A1B0GVX0 72 aa14.64□□□□□ -0.07
NME3-203ENST00000563367 A0A1W2PPM0 123 aa14.63□□□□□ -0.07
NME3-203ENST00000563367 PDE6GP18545 87 aa14.62□□□□□ -0.07
NME3-203ENST00000563367 FLGP20930 4061 aaPredicted RBP14.62□□□□□ -0.07
NME3-203ENST00000563367 J3KT08 172 aa14.6□□□□□ -0.07
NME3-203ENST00000563367 A0A1B0GW54 56 aa14.58□□□□□ -0.08
NME3-203ENST00000563367 C8orf87E5RJ46 101 aa14.57□□□□□ -0.08
NME3-203ENST00000563367 MTURNQ8N3F0 131 aa14.57□□□□□ -0.08
NME3-203ENST00000563367 H3BT86 120 aa14.53□□□□□ -0.08
NME3-203ENST00000563367 M0R2T5 61 aa14.47□□□□□ -0.09
NME3-203ENST00000563367 NDUFB1O75438 58 aa14.46□□□□□ -0.09
NME3-203ENST00000563367 KRTAP10-6P60371 365 aaPredicted RBP14.46□□□□□ -0.09
NME3-203ENST00000563367 A8MWP4 228 aa14.45□□□□□ -0.1
NME3-203ENST00000563367 LORP23490 312 aaPredicted RBP14.45□□□□□ -0.1
NME3-203ENST00000563367 SPCS1Q9Y6A9 102 aa14.44□□□□□ -0.1
NME3-203ENST00000563367 IGKV3D-7A0A0C4DH55 119 aa14.42□□□□□ -0.1
NME3-203ENST00000563367 NREPQ16612 68 aa14.41□□□□□ -0.1
NME3-203ENST00000563367 LCE2DQ5TA82 110 aaPredicted RBP14.4□□□□□ -0.1
NME3-203ENST00000563367 C8orf17Q9NRJ1 99 aa14.39□□□□□ -0.11
NME3-203ENST00000563367 COL5A1-AS1Q5SY13 56 aa14.38□□□□□ -0.11
NME3-203ENST00000563367 Q8N9P0 234 aaPredicted RBP14.35□□□□□ -0.11
NME3-203ENST00000563367 SMCPP49901 116 aaPredicted RBP14.34□□□□□ -0.11
NME3-203ENST00000563367 PRR15Q8IV56 129 aa14.33□□□□□ -0.12
NME3-203ENST00000563367 ZCCHC13Q8WW36 166 aaKnown RBP14.33□□□□□ -0.12
NME3-203ENST00000563367 HRES1P13985 223 aa14.31□□□□□ -0.12
NME3-203ENST00000563367 MPLKIPQ8TAP9 179 aa14.27□□□□□ -0.13
NME3-203ENST00000563367 Q6ZVQ6 151 aa14.26□□□□□ -0.13
NME3-203ENST00000563367 PRO0461Q9UI25 63 aa14.25□□□□□ -0.13
NME3-203ENST00000563367 MMP24-AS1A0A0U1RRL7 71 aa14.23□□□□□ -0.13
NME3-203ENST00000563367 K7EP34 96 aa14.23□□□□□ -0.13
NME3-203ENST00000563367 K7EQZ3 153 aa14.22□□□□□ -0.13
NME3-203ENST00000563367 FAM236DA0A1B0GTK5 79 aa14.2□□□□□ -0.14
NME3-203ENST00000563367 FAM236CP0DP71 79 aa14.2□□□□□ -0.14
NME3-203ENST00000563367 RBM12B-AS1Q9P1G2 102 aa14.19□□□□□ -0.14
NME3-203ENST00000563367 PCP4L1A6NKN8 68 aa14.18□□□□□ -0.14
NME3-203ENST00000563367 KRTAP9-6A0A140TA67 174 aa14.17□□□□□ -0.14
NME3-203ENST00000563367 BPY2O14599 106 aa14.17□□□□□ -0.14
NME3-203ENST00000563367 SPINK7P58062 85 aa14.17□□□□□ -0.14
NME3-203ENST00000563367 TMEM254Q8TBM7 123 aa14.16□□□□□ -0.14
NME3-203ENST00000563367 MRPL34Q9BQ48 92 aaKnown RBP14.15□□□□□ -0.14
NME3-203ENST00000563367 hDV103S1A0JD37 113 aa14.11□□□□□ -0.15
NME3-203ENST00000563367 FSIP2Q5CZC0 6907 aa14.07□□□□□ -0.16
NME3-203ENST00000563367 Q8N9L7 120 aa14.07□□□□□ -0.16
NME3-203ENST00000563367 LINC00846Q9NV44 126 aa14.05□□□□□ -0.16
NME3-203ENST00000563367 GTF2H5Q6ZYL4 71 aa14.04□□□□□ -0.16
NME3-203ENST00000563367 KRTAP9-8Q9BYQ0 159 aa14.03□□□□□ -0.16
NME3-203ENST00000563367 NDUFS5O43920 106 aa14.02□□□□□ -0.17
NME3-203ENST00000563367 WFDC13Q8IUB5 93 aa13.98□□□□□ -0.17
NME3-203ENST00000563367 UBL5Q9BZL1 73 aa13.96□□□□□ -0.17
NME3-203ENST00000563367 CRCT1Q9UGL9 99 aa13.96□□□□□ -0.17
NME3-203ENST00000563367 F8W1H4 67 aa13.94□□□□□ -0.18
NME3-203ENST00000563367 CASC2Q6XLA1 102 aa13.94□□□□□ -0.18
NME3-203ENST00000563367 ETDBQ3ZM63 59 aa13.9□□□□□ -0.18
NME3-203ENST00000563367 Q5W150 140 aa13.9□□□□□ -0.18
NME3-203ENST00000563367 HCG22E2RYF7 251 aa13.86□□□□□ -0.19
NME3-203ENST00000563367 MT2AP02795 61 aa13.84□□□□□ -0.19
NME3-203ENST00000563367 IGKV2D-30A0A075B6S6 120 aa13.79□□□□□ -0.2
NME3-203ENST00000563367 IGKV2-30P06310 120 aa13.79□□□□□ -0.2
NME3-203ENST00000563367 MT1FP04733 61 aa13.74□□□□□ -0.21
NME3-203ENST00000563367 CXCL6P80162 114 aa13.73□□□□□ -0.21
NME3-203ENST00000563367 C7orf65Q6ZTY9 151 aa13.73□□□□□ -0.21
NME3-203ENST00000563367 KRTAP10-10P60014 251 aa13.64□□□□□ -0.23
NME3-203ENST00000563367 H1FX-AS1Q4G0G2 97 aa13.64□□□□□ -0.23
NME3-203ENST00000563367 KRTAP9-3Q9BYQ3 159 aa13.58□□□□□ -0.24
NME3-203ENST00000563367 C4orf26Q17RF5 130 aa13.55□□□□□ -0.24
NME3-203ENST00000563367 USH2AO75445 5202 aa13.53□□□□□ -0.24
NME3-203ENST00000563367 ACYP1P07311 99 aa13.53□□□□□ -0.24
NME3-203ENST00000563367 TP53AIP1Q9HCN2 124 aa13.51□□□□□ -0.25
NME3-203ENST00000563367 LCE2BO14633 110 aa13.49□□□□□ -0.25
NME3-203ENST00000563367 FAM240AA0A1B0GVK7 77 aa13.48□□□□□ -0.25
NME3-203ENST00000563367 A0A1B0GV90 55 aa13.41□□□□□ -0.26
NME3-203ENST00000563367 KRTAP3-1Q9BYR8 98 aa13.4□□□□□ -0.26
NME3-203ENST00000563367 SSPOA2VEC9 5147 aa13.38□□□□□ -0.27
NME3-203ENST00000563367 ATP5EP2Q5VTU8 51 aa13.37□□□□□ -0.27
NME3-203ENST00000563367 HIST1H4AP62805 103 aaKnown RBP13.32□□□□□ -0.28
NME3-203ENST00000563367 C1orf64Q8NEQ6 169 aa13.31□□□□□ -0.28
NME3-203ENST00000563367 CYP4F30PQ9H0H9 118 aa13.26□□□□□ -0.29
NME3-203ENST00000563367 TRAV22A0A0B4J277 110 aa13.25□□□□□ -0.29
NME3-203ENST00000563367 LINC00643Q86TS7 51 aa13.24□□□□□ -0.29
NME3-203ENST00000563367 C5orf47Q569G3 176 aa13.21□□□□□ -0.29
NME3-203ENST00000563367 S4R3F8 94 aa13.2□□□□□ -0.3
NME3-203ENST00000563367 A0A087WVE0 104 aa13.19□□□□□ -0.3
NME3-203ENST00000563367 KRTAP19-1Q8IUB9 90 aa13.17□□□□□ -0.3
NME3-203ENST00000563367 LOC101927531A0A1B0GV80 90 aa13.15□□□□□ -0.3
NME3-203ENST00000563367 UQCRQO14949 82 aa13.15□□□□□ -0.3
NME3-203ENST00000563367 LCA10Q71F78 164 aa13.14□□□□□ -0.31
NME3-203ENST00000563367 H0Y9P7 68 aa13.09□□□□□ -0.31
NME3-203ENST00000563367 CSAG1Q6PB30 78 aa13.07□□□□□ -0.32
NME3-203ENST00000563367 FCGBPQ9Y6R7 5405 aaPredicted RBP13.05□□□□□ -0.32
NME3-203ENST00000563367 ATOX1O00244 68 aa13.03□□□□□ -0.32
NME3-203ENST00000563367 KRTAP9-1A8MXZ3 250 aaPredicted RBP13□□□□□ -0.33
NME3-203ENST00000563367 KRTAP3-3Q9BYR6 98 aa13□□□□□ -0.33
NME3-203ENST00000563367 FAM236AA0A1B0GUQ0 79 aa12.96□□□□□ -0.33
NME3-203ENST00000563367 FAM236BA0A1B0GV22 79 aa12.96□□□□□ -0.33
NME3-203ENST00000563367 J3QR89 54 aa12.95□□□□□ -0.34
NME3-203ENST00000563367 KRTAP19-6Q3LI70 58 aa12.95□□□□□ -0.34
NME3-203ENST00000563367 OCR1Q9BZK8 76 aa12.94□□□□□ -0.34
NME3-203ENST00000563367 LINC00208Q96KT6 92 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms