RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 VPS25Q9BRG1 176 aa8.64□□□□□ -1.03
TSC2-219ENST00000563346 MT2AP02795 61 aa8.63□□□□□ -1.03
TSC2-219ENST00000563346 MPLKIPQ8TAP9 179 aa8.62□□□□□ -1.03
TSC2-219ENST00000563346 C8orf87E5RJ46 101 aa8.61□□□□□ -1.03
TSC2-219ENST00000563346 A0A1B0GVX0 72 aa8.59□□□□□ -1.03
TSC2-219ENST00000563346 RBM3P98179 157 aaKnown RBP8.59□□□□□ -1.03
TSC2-219ENST00000563346 DSCR8Q96T75 97 aa8.59□□□□□ -1.03
TSC2-219ENST00000563346 SCGB1C2P0DMR2 95 aa8.58□□□□□ -1.04
TSC2-219ENST00000563346 MTURNQ8N3F0 131 aa8.58□□□□□ -1.04
TSC2-219ENST00000563346 PYY3Q5JQD4 70 aa8.57□□□□□ -1.04
TSC2-219ENST00000563346 MT1FP04733 61 aa8.56□□□□□ -1.04
TSC2-219ENST00000563346 KRTAP10-10P60014 251 aa8.56□□□□□ -1.04
TSC2-219ENST00000563346 KRTAP19-1Q8IUB9 90 aa8.56□□□□□ -1.04
TSC2-219ENST00000563346 J3KT08 172 aa8.53□□□□□ -1.04
TSC2-219ENST00000563346 ZCCHC13Q8WW36 166 aaKnown RBP8.53□□□□□ -1.04
TSC2-219ENST00000563346 UQCR10Q9UDW1 63 aa8.53□□□□□ -1.04
TSC2-219ENST00000563346 C21orf62-AS1Q17RA5 79 aa8.52□□□□□ -1.05
TSC2-219ENST00000563346 MACF1Q9UPN3 7388 aaKnown RBP8.51□□□□□ -1.05
TSC2-219ENST00000563346 C9JAW5 83 aa8.51□□□□□ -1.05
TSC2-219ENST00000563346 SPINK7P58062 85 aa8.5□□□□□ -1.05
TSC2-219ENST00000563346 SYNE2Q8WXH0 6885 aaKnown RBP8.5□□□□□ -1.05
TSC2-219ENST00000563346 NDUFB1O75438 58 aa8.49□□□□□ -1.05
TSC2-219ENST00000563346 BAALC-AS2P0C853 105 aa8.49□□□□□ -1.05
TSC2-219ENST00000563346 KRTAP9-3Q9BYQ3 159 aa8.49□□□□□ -1.05
TSC2-219ENST00000563346 Q6ZQT0 140 aa8.47□□□□□ -1.05
TSC2-219ENST00000563346 LYRM7Q5U5X0 104 aa8.46□□□□□ -1.06
TSC2-219ENST00000563346 Q8N9P0 234 aaPredicted RBP8.43□□□□□ -1.06
TSC2-219ENST00000563346 C8orf17Q9NRJ1 99 aa8.41□□□□□ -1.06
TSC2-219ENST00000563346 A8MWP4 228 aa8.4□□□□□ -1.06
TSC2-219ENST00000563346 JMJD7-PLA2G4BH0Y9G9 81 aa8.4□□□□□ -1.06
TSC2-219ENST00000563346 WFDC13Q8IUB5 93 aa8.4□□□□□ -1.06
TSC2-219ENST00000563346 ATXN8Q156A1 80 aa8.38□□□□□ -1.07
TSC2-219ENST00000563346 A0A1B0GW54 56 aa8.37□□□□□ -1.07
TSC2-219ENST00000563346 TMA7Q9Y2S6 64 aaKnown RBP8.37□□□□□ -1.07
TSC2-219ENST00000563346 LOC110117498A0A087WWA1 95 aa8.36□□□□□ -1.07
TSC2-219ENST00000563346 IGKV3D-7A0A0C4DH55 119 aa8.35□□□□□ -1.07
TSC2-219ENST00000563346 PDE6GP18545 87 aa8.35□□□□□ -1.07
TSC2-219ENST00000563346 Q6ZVQ6 151 aa8.35□□□□□ -1.07
TSC2-219ENST00000563346 LINC00846Q9NV44 126 aa8.35□□□□□ -1.07
TSC2-219ENST00000563346 NAA38Q9BRA0 125 aaKnown RBP8.33□□□□□ -1.08
TSC2-219ENST00000563346 M0R143 59 aa8.32□□□□□ -1.08
TSC2-219ENST00000563346 C14orf132Q9NPU4 83 aa8.31□□□□□ -1.08
TSC2-219ENST00000563346 PRR15Q8IV56 129 aa8.3□□□□□ -1.08
TSC2-219ENST00000563346 NREPQ16612 68 aa8.29□□□□□ -1.08
TSC2-219ENST00000563346 MRPL34Q9BQ48 92 aaKnown RBP8.27□□□□□ -1.09
TSC2-219ENST00000563346 TMEM254Q8TBM7 123 aa8.26□□□□□ -1.09
TSC2-219ENST00000563346 MMP24-AS1A0A0U1RRL7 71 aa8.24□□□□□ -1.09
TSC2-219ENST00000563346 NDUFS5O43920 106 aa8.24□□□□□ -1.09
TSC2-219ENST00000563346 KRTAP19-6Q3LI70 58 aa8.24□□□□□ -1.09
TSC2-219ENST00000563346 H1FX-AS1Q4G0G2 97 aa8.22□□□□□ -1.09
TSC2-219ENST00000563346 hDV103S1A0JD37 113 aa8.21□□□□□ -1.1
TSC2-219ENST00000563346 K7EQZ3 153 aa8.18□□□□□ -1.1
TSC2-219ENST00000563346 IGKV2D-30A0A075B6S6 120 aa8.16□□□□□ -1.1
TSC2-219ENST00000563346 LOC100996750A0A140TA64 210 aa8.16□□□□□ -1.1
TSC2-219ENST00000563346 IGKV2-30P06310 120 aa8.16□□□□□ -1.1
TSC2-219ENST00000563346 KRTAP4-6Q9BYQ5 205 aa8.16□□□□□ -1.1
TSC2-219ENST00000563346 KRTAP6-3Q3LI67 103 aa8.14□□□□□ -1.11
TSC2-219ENST00000563346 BPY2O14599 106 aa8.12□□□□□ -1.11
TSC2-219ENST00000563346 BATFQ16520 125 aa8.12□□□□□ -1.11
TSC2-219ENST00000563346 C7orf65Q6ZTY9 151 aa8.12□□□□□ -1.11
TSC2-219ENST00000563346 H3BT86 120 aa8.1□□□□□ -1.11
TSC2-219ENST00000563346 Q5W150 140 aa8.08□□□□□ -1.12
TSC2-219ENST00000563346 SMIM6P0DI80 62 aa8.07□□□□□ -1.12
TSC2-219ENST00000563346 TSTD3H0UI37 97 aa8.06□□□□□ -1.12
TSC2-219ENST00000563346 CASC2Q6XLA1 102 aa8.05□□□□□ -1.12
TSC2-219ENST00000563346 HCG22E2RYF7 251 aa8.04□□□□□ -1.12
TSC2-219ENST00000563346 C9orf118A6NHY6 69 aa8.03□□□□□ -1.12
TSC2-219ENST00000563346 Q8N9L7 120 aa8.03□□□□□ -1.12
TSC2-219ENST00000563346 C4orf26Q17RF5 130 aa8.02□□□□□ -1.13
TSC2-219ENST00000563346 NEBP20929 6669 aa8.01□□□□□ -1.13
TSC2-219ENST00000563346 A0A1W2PPM0 123 aa8.01□□□□□ -1.13
TSC2-219ENST00000563346 CXCL6P80162 114 aa7.99□□□□□ -1.13
TSC2-219ENST00000563346 TAX1BP3O14907 124 aa7.97□□□□□ -1.13
TSC2-219ENST00000563346 FAM236AA0A1B0GUQ0 79 aa7.95□□□□□ -1.14
TSC2-219ENST00000563346 FAM236BA0A1B0GV22 79 aa7.95□□□□□ -1.14
TSC2-219ENST00000563346 C5orf47Q569G3 176 aa7.95□□□□□ -1.14
TSC2-219ENST00000563346 SPCS1Q9Y6A9 102 aa7.9□□□□□ -1.14
TSC2-219ENST00000563346 S4R3F8 94 aa7.9□□□□□ -1.14
TSC2-219ENST00000563346 MUC12Q9UKN1 5478 aa7.9□□□□□ -1.14
TSC2-219ENST00000563346 UBL5Q9BZL1 73 aa7.89□□□□□ -1.15
TSC2-219ENST00000563346 KRTAP20-1Q3LI63 56 aa7.86□□□□□ -1.15
TSC2-219ENST00000563346 CSAG1Q6PB30 78 aa7.86□□□□□ -1.15
TSC2-219ENST00000563346 C1orf64Q8NEQ6 169 aa7.85□□□□□ -1.15
TSC2-219ENST00000563346 KRTAP3-1Q9BYR8 98 aa7.85□□□□□ -1.15
TSC2-219ENST00000563346 A6NN06 94 aa7.84□□□□□ -1.15
TSC2-219ENST00000563346 Q5VV11 94 aa7.83□□□□□ -1.16
TSC2-219ENST00000563346 LCA10Q71F78 164 aa7.81□□□□□ -1.16
TSC2-219ENST00000563346 MT1BP07438 61 aa7.79□□□□□ -1.16
TSC2-219ENST00000563346 H3BS24 57 aa7.78□□□□□ -1.16
TSC2-219ENST00000563346 TP53AIP1Q9HCN2 124 aa7.78□□□□□ -1.16
TSC2-219ENST00000563346 SPRR2GQ9BYE4 73 aa7.77□□□□□ -1.17
TSC2-219ENST00000563346 KRTAP19-8Q3LI54 63 aa7.75□□□□□ -1.17
TSC2-219ENST00000563346 PRO0461Q9UI25 63 aa7.74□□□□□ -1.17
TSC2-219ENST00000563346 LOC105371267A0A1B0GV96 52 aa7.72□□□□□ -1.17
TSC2-219ENST00000563346 KLKP1Q107X0 134 aa7.71□□□□□ -1.18
TSC2-219ENST00000563346 K7EP34 96 aa7.7□□□□□ -1.18
TSC2-219ENST00000563346 COL5A1-AS1Q5SY13 56 aa7.7□□□□□ -1.18
TSC2-219ENST00000563346 KRTAP10-5P60370 271 aa7.67□□□□□ -1.18
TSC2-219ENST00000563346 MDN1Q9NU22 5596 aa7.65□□□□□ -1.19
TSC2-219ENST00000563346 CYP4F30PQ9H0H9 118 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms