RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 M0R143 59 aa7.67□□□□□ -1.18
LPCAT4-204ENST00000563240 ATXN8Q156A1 80 aa7.67□□□□□ -1.18
LPCAT4-204ENST00000563240 HRES1P13985 223 aa7.66□□□□□ -1.18
LPCAT4-204ENST00000563240 Q6ZQT0 140 aa7.66□□□□□ -1.18
LPCAT4-204ENST00000563240 KRTAP9-8Q9BYQ0 159 aa7.65□□□□□ -1.18
LPCAT4-204ENST00000563240 RBM12B-AS1Q9P1G2 102 aa7.65□□□□□ -1.18
LPCAT4-204ENST00000563240 J3KT08 172 aa7.64□□□□□ -1.19
LPCAT4-204ENST00000563240 C21orf62-AS1Q17RA5 79 aa7.62□□□□□ -1.19
LPCAT4-204ENST00000563240 JMJD7-PLA2G4BH0Y9G9 81 aa7.61□□□□□ -1.19
LPCAT4-204ENST00000563240 NDUFB1O75438 58 aa7.61□□□□□ -1.19
LPCAT4-204ENST00000563240 MPLKIPQ8TAP9 179 aa7.61□□□□□ -1.19
LPCAT4-204ENST00000563240 ZCCHC13Q8WW36 166 aaKnown RBP7.6□□□□□ -1.19
LPCAT4-204ENST00000563240 C14orf132Q9NPU4 83 aa7.6□□□□□ -1.19
LPCAT4-204ENST00000563240 LOC110117498A0A087WWA1 95 aa7.58□□□□□ -1.2
LPCAT4-204ENST00000563240 BATFQ16520 125 aa7.58□□□□□ -1.2
LPCAT4-204ENST00000563240 SPINK7P58062 85 aa7.57□□□□□ -1.2
LPCAT4-204ENST00000563240 LYRM7Q5U5X0 104 aa7.57□□□□□ -1.2
LPCAT4-204ENST00000563240 C8orf17Q9NRJ1 99 aa7.57□□□□□ -1.2
LPCAT4-204ENST00000563240 A8MWP4 228 aa7.56□□□□□ -1.2
LPCAT4-204ENST00000563240 SMIM6P0DI80 62 aa7.56□□□□□ -1.2
LPCAT4-204ENST00000563240 IGKV3D-7A0A0C4DH55 119 aa7.55□□□□□ -1.2
LPCAT4-204ENST00000563240 MT2AP02795 61 aa7.55□□□□□ -1.2
LPCAT4-204ENST00000563240 KRTAP3-3Q9BYR6 98 aa7.55□□□□□ -1.2
LPCAT4-204ENST00000563240 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
LPCAT4-204ENST00000563240 PDE6GP18545 87 aa7.54□□□□□ -1.2
LPCAT4-204ENST00000563240 Q8N9P0 234 aaPredicted RBP7.54□□□□□ -1.2
LPCAT4-204ENST00000563240 A0A1B0GW54 56 aa7.53□□□□□ -1.2
LPCAT4-204ENST00000563240 MTURNQ8N3F0 131 aa7.53□□□□□ -1.2
LPCAT4-204ENST00000563240 NREPQ16612 68 aa7.52□□□□□ -1.21
LPCAT4-204ENST00000563240 TSTD3H0UI37 97 aa7.51□□□□□ -1.21
LPCAT4-204ENST00000563240 Q6ZVQ6 151 aa7.5□□□□□ -1.21
LPCAT4-204ENST00000563240 MT1FP04733 61 aa7.49□□□□□ -1.21
LPCAT4-204ENST00000563240 PRR15Q8IV56 129 aa7.49□□□□□ -1.21
LPCAT4-204ENST00000563240 KRTAP10-10P60014 251 aa7.48□□□□□ -1.21
LPCAT4-204ENST00000563240 WFDC13Q8IUB5 93 aa7.47□□□□□ -1.21
LPCAT4-204ENST00000563240 C9orf118A6NHY6 69 aa7.45□□□□□ -1.22
LPCAT4-204ENST00000563240 MMP24-AS1A0A0U1RRL7 71 aa7.43□□□□□ -1.22
LPCAT4-204ENST00000563240 TAX1BP3O14907 124 aa7.43□□□□□ -1.22
LPCAT4-204ENST00000563240 MRPL34Q9BQ48 92 aaKnown RBP7.43□□□□□ -1.22
LPCAT4-204ENST00000563240 A0A1W2PPM0 123 aa7.42□□□□□ -1.22
LPCAT4-204ENST00000563240 TMEM254Q8TBM7 123 aa7.42□□□□□ -1.22
LPCAT4-204ENST00000563240 USH2AO75445 5202 aa7.41□□□□□ -1.22
LPCAT4-204ENST00000563240 H3BT86 120 aa7.41□□□□□ -1.22
LPCAT4-204ENST00000563240 K7EQZ3 153 aa7.41□□□□□ -1.22
LPCAT4-204ENST00000563240 LCE2BO14633 110 aa7.41□□□□□ -1.22
LPCAT4-204ENST00000563240 NDUFS5O43920 106 aa7.41□□□□□ -1.22
LPCAT4-204ENST00000563240 KRTAP9-3Q9BYQ3 159 aa7.41□□□□□ -1.22
LPCAT4-204ENST00000563240 LOC105371267A0A1B0GV96 52 aa7.39□□□□□ -1.23
LPCAT4-204ENST00000563240 hDV103S1A0JD37 113 aa7.39□□□□□ -1.23
LPCAT4-204ENST00000563240 BPY2O14599 106 aa7.37□□□□□ -1.23
LPCAT4-204ENST00000563240 SSPOA2VEC9 5147 aa7.36□□□□□ -1.23
LPCAT4-204ENST00000563240 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.34□□□□□ -1.23
LPCAT4-204ENST00000563240 Q8N9L7 120 aa7.33□□□□□ -1.24
LPCAT4-204ENST00000563240 SPCS1Q9Y6A9 102 aa7.33□□□□□ -1.24
LPCAT4-204ENST00000563240 IGKV2D-30A0A075B6S6 120 aa7.32□□□□□ -1.24
LPCAT4-204ENST00000563240 IGKV2-30P06310 120 aa7.32□□□□□ -1.24
LPCAT4-204ENST00000563240 KRTAP19-1Q8IUB9 90 aa7.32□□□□□ -1.24
LPCAT4-204ENST00000563240 Q5W150 140 aa7.31□□□□□ -1.24
LPCAT4-204ENST00000563240 SMCPP49901 116 aaPredicted RBP7.29□□□□□ -1.24
LPCAT4-204ENST00000563240 H1FX-AS1Q4G0G2 97 aa7.29□□□□□ -1.24
LPCAT4-204ENST00000563240 CASC2Q6XLA1 102 aa7.28□□□□□ -1.24
LPCAT4-204ENST00000563240 KRTAP9-7A8MTY7 169 aa7.26□□□□□ -1.25
LPCAT4-204ENST00000563240 HCG22E2RYF7 251 aa7.26□□□□□ -1.25
LPCAT4-204ENST00000563240 C7orf65Q6ZTY9 151 aa7.25□□□□□ -1.25
LPCAT4-204ENST00000563240 COL5A1-AS1Q5SY13 56 aa7.21□□□□□ -1.26
LPCAT4-204ENST00000563240 LINC00846Q9NV44 126 aa7.21□□□□□ -1.26
LPCAT4-204ENST00000563240 FCGBPQ9Y6R7 5405 aaPredicted RBP7.21□□□□□ -1.26
LPCAT4-204ENST00000563240 C4orf26Q17RF5 130 aa7.2□□□□□ -1.26
LPCAT4-204ENST00000563240 PRO0461Q9UI25 63 aa7.2□□□□□ -1.26
LPCAT4-204ENST00000563240 UBL5Q9BZL1 73 aa7.19□□□□□ -1.26
LPCAT4-204ENST00000563240 CXCL6P80162 114 aa7.18□□□□□ -1.26
LPCAT4-204ENST00000563240 K7EP34 96 aa7.17□□□□□ -1.26
LPCAT4-204ENST00000563240 KRTAP19-6Q3LI70 58 aa7.13□□□□□ -1.27
LPCAT4-204ENST00000563240 C5orf47Q569G3 176 aa7.09□□□□□ -1.27
LPCAT4-204ENST00000563240 GTF2H5Q6ZYL4 71 aa7.06□□□□□ -1.28
LPCAT4-204ENST00000563240 KRTAP3-1Q9BYR8 98 aa7.06□□□□□ -1.28
LPCAT4-204ENST00000563240 PCP4L1A6NKN8 68 aa7.05□□□□□ -1.28
LPCAT4-204ENST00000563240 ETDBQ3ZM63 59 aa7.05□□□□□ -1.28
LPCAT4-204ENST00000563240 C1orf64Q8NEQ6 169 aa7.04□□□□□ -1.28
LPCAT4-204ENST00000563240 S4R3F8 94 aa7.03□□□□□ -1.28
LPCAT4-204ENST00000563240 FAM236AA0A1B0GUQ0 79 aa7.02□□□□□ -1.29
LPCAT4-204ENST00000563240 FAM236BA0A1B0GV22 79 aa7.02□□□□□ -1.29
LPCAT4-204ENST00000563240 F8W1H4 67 aa7.02□□□□□ -1.29
LPCAT4-204ENST00000563240 TP53AIP1Q9HCN2 124 aa7.01□□□□□ -1.29
LPCAT4-204ENST00000563240 CSAG1Q6PB30 78 aa6.98□□□□□ -1.29
LPCAT4-204ENST00000563240 LCA10Q71F78 164 aa6.98□□□□□ -1.29
LPCAT4-204ENST00000563240 MACF1Q9UPN3 7388 aaKnown RBP6.95□□□□□ -1.3
LPCAT4-204ENST00000563240 CYP4F30PQ9H0H9 118 aa6.92□□□□□ -1.3
LPCAT4-204ENST00000563240 SYNE2Q8WXH0 6885 aaKnown RBP6.91□□□□□ -1.3
LPCAT4-204ENST00000563240 A0A087WVE0 104 aa6.86□□□□□ -1.31
LPCAT4-204ENST00000563240 TRAV22A0A0B4J277 110 aa6.86□□□□□ -1.31
LPCAT4-204ENST00000563240 MT1BP07438 61 aa6.85□□□□□ -1.31
LPCAT4-204ENST00000563240 HIST1H4AP62805 103 aaKnown RBP6.85□□□□□ -1.31
LPCAT4-204ENST00000563240 ACYP1P07311 99 aa6.84□□□□□ -1.31
LPCAT4-204ENST00000563240 Q5VV11 94 aa6.84□□□□□ -1.31
LPCAT4-204ENST00000563240 LOC101927531A0A1B0GV80 90 aa6.83□□□□□ -1.32
LPCAT4-204ENST00000563240 SPRR2GQ9BYE4 73 aa6.83□□□□□ -1.32
LPCAT4-204ENST00000563240 A6NN06 94 aa6.82□□□□□ -1.32
LPCAT4-204ENST00000563240 KLKP1Q107X0 134 aa6.82□□□□□ -1.32
LPCAT4-204ENST00000563240 KRTAP6-3Q3LI67 103 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms