RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 J3KT08 172 aa9.19□□□□□ -0.94
CMTM3-204ENST00000562357 TSTD3H0UI37 97 aa9.18□□□□□ -0.94
CMTM3-204ENST00000562357 LORP23490 312 aaPredicted RBP9.18□□□□□ -0.94
CMTM3-204ENST00000562357 A0A1B0GVX0 72 aa9.17□□□□□ -0.94
CMTM3-204ENST00000562357 KRTAP16-1A8MUX0 517 aa9.17□□□□□ -0.94
CMTM3-204ENST00000562357 NOTCH2NLQ7Z3S9 236 aa9.16□□□□□ -0.94
CMTM3-204ENST00000562357 NDUFB1O75438 58 aa9.14□□□□□ -0.95
CMTM3-204ENST00000562357 PDE6GP18545 87 aa9.14□□□□□ -0.95
CMTM3-204ENST00000562357 Q6ZQT0 140 aa9.14□□□□□ -0.95
CMTM3-204ENST00000562357 A0A1B0GW54 56 aa9.13□□□□□ -0.95
CMTM3-204ENST00000562357 BATFQ16520 125 aa9.13□□□□□ -0.95
CMTM3-204ENST00000562357 LOC110117498A0A087WWA1 95 aa9.11□□□□□ -0.95
CMTM3-204ENST00000562357 FAM236DA0A1B0GTK5 79 aa9.11□□□□□ -0.95
CMTM3-204ENST00000562357 FAM236CP0DP71 79 aa9.11□□□□□ -0.95
CMTM3-204ENST00000562357 RBM12B-AS1Q9P1G2 102 aa9.08□□□□□ -0.96
CMTM3-204ENST00000562357 FLGP20930 4061 aaPredicted RBP9.07□□□□□ -0.96
CMTM3-204ENST00000562357 C14orf132Q9NPU4 83 aa9.07□□□□□ -0.96
CMTM3-204ENST00000562357 A8MWP4 228 aa9.04□□□□□ -0.96
CMTM3-204ENST00000562357 ZCCHC13Q8WW36 166 aaKnown RBP9.02□□□□□ -0.97
CMTM3-204ENST00000562357 NREPQ16612 68 aa9.01□□□□□ -0.97
CMTM3-204ENST00000562357 C9orf118A6NHY6 69 aa9□□□□□ -0.97
CMTM3-204ENST00000562357 H3BT86 120 aa8.99□□□□□ -0.97
CMTM3-204ENST00000562357 C8orf17Q9NRJ1 99 aa8.99□□□□□ -0.97
CMTM3-204ENST00000562357 HRES1P13985 223 aa8.98□□□□□ -0.97
CMTM3-204ENST00000562357 MTURNQ8N3F0 131 aa8.98□□□□□ -0.97
CMTM3-204ENST00000562357 A0A1W2PPM0 123 aa8.97□□□□□ -0.97
CMTM3-204ENST00000562357 Q8N9P0 234 aaPredicted RBP8.97□□□□□ -0.97
CMTM3-204ENST00000562357 IGKV3D-7A0A0C4DH55 119 aa8.96□□□□□ -0.98
CMTM3-204ENST00000562357 LOC105371267A0A1B0GV96 52 aa8.95□□□□□ -0.98
CMTM3-204ENST00000562357 MPLKIPQ8TAP9 179 aa8.94□□□□□ -0.98
CMTM3-204ENST00000562357 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.93□□□□□ -0.98
CMTM3-204ENST00000562357 TAX1BP3O14907 124 aa8.93□□□□□ -0.98
CMTM3-204ENST00000562357 SPINK7P58062 85 aa8.93□□□□□ -0.98
CMTM3-204ENST00000562357 Q6ZVQ6 151 aa8.93□□□□□ -0.98
CMTM3-204ENST00000562357 PRR15Q8IV56 129 aa8.93□□□□□ -0.98
CMTM3-204ENST00000562357 TMEM254Q8TBM7 123 aa8.87□□□□□ -0.99
CMTM3-204ENST00000562357 SPCS1Q9Y6A9 102 aa8.87□□□□□ -0.99
CMTM3-204ENST00000562357 MRPL34Q9BQ48 92 aaKnown RBP8.86□□□□□ -0.99
CMTM3-204ENST00000562357 BPY2O14599 106 aa8.85□□□□□ -0.99
CMTM3-204ENST00000562357 KRTAP9-8Q9BYQ0 159 aa8.85□□□□□ -0.99
CMTM3-204ENST00000562357 MMP24-AS1A0A0U1RRL7 71 aa8.84□□□□□ -0.99
CMTM3-204ENST00000562357 NDUFS5O43920 106 aa8.84□□□□□ -0.99
CMTM3-204ENST00000562357 hDV103S1A0JD37 113 aa8.83□□□□□ -1
CMTM3-204ENST00000562357 K7EQZ3 153 aa8.83□□□□□ -1
CMTM3-204ENST00000562357 WFDC13Q8IUB5 93 aa8.83□□□□□ -1
CMTM3-204ENST00000562357 COL5A1-AS1Q5SY13 56 aa8.79□□□□□ -1
CMTM3-204ENST00000562357 MT2AP02795 61 aa8.75□□□□□ -1.01
CMTM3-204ENST00000562357 KRTAP10-10P60014 251 aa8.72□□□□□ -1.01
CMTM3-204ENST00000562357 SMCPP49901 116 aaPredicted RBP8.71□□□□□ -1.02
CMTM3-204ENST00000562357 CASC2Q6XLA1 102 aa8.71□□□□□ -1.02
CMTM3-204ENST00000562357 UBL5Q9BZL1 73 aa8.71□□□□□ -1.02
CMTM3-204ENST00000562357 Q8N9L7 120 aa8.7□□□□□ -1.02
CMTM3-204ENST00000562357 K7EP34 96 aa8.69□□□□□ -1.02
CMTM3-204ENST00000562357 IGKV2D-30A0A075B6S6 120 aa8.68□□□□□ -1.02
CMTM3-204ENST00000562357 MT1FP04733 61 aa8.68□□□□□ -1.02
CMTM3-204ENST00000562357 IGKV2-30P06310 120 aa8.68□□□□□ -1.02
CMTM3-204ENST00000562357 C7orf65Q6ZTY9 151 aa8.67□□□□□ -1.02
CMTM3-204ENST00000562357 HCG22E2RYF7 251 aa8.66□□□□□ -1.02
CMTM3-204ENST00000562357 PRO0461Q9UI25 63 aa8.65□□□□□ -1.02
CMTM3-204ENST00000562357 GTF2H5Q6ZYL4 71 aa8.64□□□□□ -1.03
CMTM3-204ENST00000562357 LINC00846Q9NV44 126 aa8.64□□□□□ -1.03
CMTM3-204ENST00000562357 CXCL6P80162 114 aa8.62□□□□□ -1.03
CMTM3-204ENST00000562357 H1FX-AS1Q4G0G2 97 aa8.62□□□□□ -1.03
CMTM3-204ENST00000562357 Q5W150 140 aa8.61□□□□□ -1.03
CMTM3-204ENST00000562357 KRTAP9-3Q9BYQ3 159 aa8.57□□□□□ -1.04
CMTM3-204ENST00000562357 USH2AO75445 5202 aa8.55□□□□□ -1.04
CMTM3-204ENST00000562357 F8W1H4 67 aa8.55□□□□□ -1.04
CMTM3-204ENST00000562357 PCP4L1A6NKN8 68 aa8.54□□□□□ -1.04
CMTM3-204ENST00000562357 LCE2BO14633 110 aa8.52□□□□□ -1.05
CMTM3-204ENST00000562357 C4orf26Q17RF5 130 aa8.49□□□□□ -1.05
CMTM3-204ENST00000562357 ETDBQ3ZM63 59 aa8.49□□□□□ -1.05
CMTM3-204ENST00000562357 SSPOA2VEC9 5147 aa8.48□□□□□ -1.05
CMTM3-204ENST00000562357 TP53AIP1Q9HCN2 124 aa8.47□□□□□ -1.05
CMTM3-204ENST00000562357 KRTAP19-1Q8IUB9 90 aa8.41□□□□□ -1.06
CMTM3-204ENST00000562357 ACYP1P07311 99 aa8.37□□□□□ -1.07
CMTM3-204ENST00000562357 C1orf64Q8NEQ6 169 aa8.36□□□□□ -1.07
CMTM3-204ENST00000562357 C5orf47Q569G3 176 aa8.33□□□□□ -1.08
CMTM3-204ENST00000562357 S4R3F8 94 aa8.33□□□□□ -1.08
CMTM3-204ENST00000562357 ATP5EP2Q5VTU8 51 aa8.31□□□□□ -1.08
CMTM3-204ENST00000562357 FCGBPQ9Y6R7 5405 aaPredicted RBP8.31□□□□□ -1.08
CMTM3-204ENST00000562357 FAM240AA0A1B0GVK7 77 aa8.3□□□□□ -1.08
CMTM3-204ENST00000562357 FAM236AA0A1B0GUQ0 79 aa8.29□□□□□ -1.08
CMTM3-204ENST00000562357 FAM236BA0A1B0GV22 79 aa8.29□□□□□ -1.08
CMTM3-204ENST00000562357 CSAG1Q6PB30 78 aa8.29□□□□□ -1.08
CMTM3-204ENST00000562357 KRTAP3-1Q9BYR8 98 aa8.28□□□□□ -1.08
CMTM3-204ENST00000562357 SYNE2Q8WXH0 6885 aaKnown RBP8.28□□□□□ -1.08
CMTM3-204ENST00000562357 TRAV22A0A0B4J277 110 aa8.27□□□□□ -1.09
CMTM3-204ENST00000562357 HIST1H4AP62805 103 aaKnown RBP8.26□□□□□ -1.09
CMTM3-204ENST00000562357 KRTAP19-6Q3LI70 58 aa8.26□□□□□ -1.09
CMTM3-204ENST00000562357 LOC101927531A0A1B0GV80 90 aa8.24□□□□□ -1.09
CMTM3-204ENST00000562357 CYP4F30PQ9H0H9 118 aa8.24□□□□□ -1.09
CMTM3-204ENST00000562357 LCA10Q71F78 164 aa8.23□□□□□ -1.09
CMTM3-204ENST00000562357 UQCRQO14949 82 aa8.18□□□□□ -1.1
CMTM3-204ENST00000562357 MACF1Q9UPN3 7388 aaKnown RBP8.17□□□□□ -1.1
CMTM3-204ENST00000562357 ATOX1O00244 68 aa8.17□□□□□ -1.1
CMTM3-204ENST00000562357 LINC00643Q86TS7 51 aa8.15□□□□□ -1.1
CMTM3-204ENST00000562357 H0Y9P7 68 aa8.14□□□□□ -1.11
CMTM3-204ENST00000562357 A0A087WVE0 104 aa8.08□□□□□ -1.12
CMTM3-204ENST00000562357 KLKP1Q107X0 134 aa8.06□□□□□ -1.12
CMTM3-204ENST00000562357 Q5VV11 94 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms