RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 C4orf48Q5BLP8 95 aa13.6□□□□□ -0.23
TMEM249-201ENST00000561638 V9GYY9 64 aa13.6□□□□□ -0.23
TMEM249-201ENST00000561638 LOC110117498A0A087WWA1 95 aa13.6□□□□□ -0.23
TMEM249-201ENST00000561638 A0A0G2JQZ4 141 aa13.59□□□□□ -0.23
TMEM249-201ENST00000561638 RBM3P98179 157 aaKnown RBP13.58□□□□□ -0.23
TMEM249-201ENST00000561638 IGFL1Q6UW32 110 aa13.58□□□□□ -0.24
TMEM249-201ENST00000561638 DMBT1Q9UGM3 2413 aaPredicted RBP13.56□□□□□ -0.24
TMEM249-201ENST00000561638 TNXBP22105 4242 aa13.56□□□□□ -0.24
TMEM249-201ENST00000561638 C1orf195Q5TG92 126 aa13.53□□□□□ -0.24
TMEM249-201ENST00000561638 SPAG11AQ6PDA7 123 aa13.53□□□□□ -0.24
TMEM249-201ENST00000561638 SPINK1P00995 79 aa13.49□□□□□ -0.25
TMEM249-201ENST00000561638 Q6ZQT0 140 aa13.48□□□□□ -0.25
TMEM249-201ENST00000561638 TRBV7-4A0A0J9YYF1 115 aa13.48□□□□□ -0.25
TMEM249-201ENST00000561638 CD164Q04900 197 aa13.48□□□□□ -0.25
TMEM249-201ENST00000561638 FP248Q71RG6 208 aaPredicted RBP13.45□□□□□ -0.26
TMEM249-201ENST00000561638 SEC61GP60059 68 aa13.44□□□□□ -0.26
TMEM249-201ENST00000561638 BRK1Q8WUW1 75 aa13.44□□□□□ -0.26
TMEM249-201ENST00000561638 Q6ZVQ6 151 aa13.42□□□□□ -0.26
TMEM249-201ENST00000561638 A0A1W2PNM2 257 aa13.4□□□□□ -0.26
TMEM249-201ENST00000561638 LIMD2Q9BT23 127 aa13.4□□□□□ -0.26
TMEM249-201ENST00000561638 RPS29P62273 56 aaKnown RBP13.39□□□□□ -0.27
TMEM249-201ENST00000561638 SNURFQ9Y675 71 aa13.37□□□□□ -0.27
TMEM249-201ENST00000561638 NREPQ16612 68 aa13.36□□□□□ -0.27
TMEM249-201ENST00000561638 A0A087WSZ3 146 aa13.35□□□□□ -0.27
TMEM249-201ENST00000561638 TMEM254Q8TBM7 123 aa13.35□□□□□ -0.27
TMEM249-201ENST00000561638 RETNLBQ9BQ08 111 aa13.3□□□□□ -0.28
TMEM249-201ENST00000561638 PRR15Q8IV56 129 aa13.29□□□□□ -0.28
TMEM249-201ENST00000561638 BPY2O14599 106 aa13.28□□□□□ -0.28
TMEM249-201ENST00000561638 A0A1B0GW54 56 aa13.24□□□□□ -0.29
TMEM249-201ENST00000561638 A0A0U1RQV1 116 aa13.21□□□□□ -0.29
TMEM249-201ENST00000561638 ASB16-AS1Q495Z4 193 aa13.2□□□□□ -0.3
TMEM249-201ENST00000561638 PMAIP1Q13794 54 aa13.19□□□□□ -0.3
TMEM249-201ENST00000561638 PRR4Q16378 134 aa13.19□□□□□ -0.3
TMEM249-201ENST00000561638 HERC1Q15751 4861 aa13.18□□□□□ -0.3
TMEM249-201ENST00000561638 Q1T7F1 81 aa13.16□□□□□ -0.3
TMEM249-201ENST00000561638 MPLKIPQ8TAP9 179 aa13.16□□□□□ -0.3
TMEM249-201ENST00000561638 OCR1Q9BZK8 76 aa13.12□□□□□ -0.31
TMEM249-201ENST00000561638 IGLV7-46A0A075B6I9 117 aa13.09□□□□□ -0.31
TMEM249-201ENST00000561638 DEFB116Q30KQ4 102 aa13.09□□□□□ -0.31
TMEM249-201ENST00000561638 Q96NJ1 140 aa13.09□□□□□ -0.31
TMEM249-201ENST00000561638 LINC00472Q9H8W2 130 aa13.08□□□□□ -0.32
TMEM249-201ENST00000561638 hDV103S1A0JD37 113 aa13.06□□□□□ -0.32
TMEM249-201ENST00000561638 IGKV4-1P06312 121 aa13.06□□□□□ -0.32
TMEM249-201ENST00000561638 NDUFB1O75438 58 aa13.05□□□□□ -0.32
TMEM249-201ENST00000561638 CYP4F30PQ9H0H9 118 aa12.99□□□□□ -0.33
TMEM249-201ENST00000561638 TPRXLQ17RH7 258 aa12.92□□□□□ -0.34
TMEM249-201ENST00000561638 C9orf92A6NGG3 77 aa12.91□□□□□ -0.34
TMEM249-201ENST00000561638 KRTAP13-3Q3SY46 172 aa12.89□□□□□ -0.35
TMEM249-201ENST00000561638 IGHV6-1A0A0B4J1U7 121 aa12.89□□□□□ -0.35
TMEM249-201ENST00000561638 A8MWP4 228 aa12.89□□□□□ -0.35
TMEM249-201ENST00000561638 C1orf64Q8NEQ6 169 aa12.88□□□□□ -0.35
TMEM249-201ENST00000561638 HMCN2Q8NDA2 5059 aa12.87□□□□□ -0.35
TMEM249-201ENST00000561638 A0A1B0GVX0 72 aa12.86□□□□□ -0.35
TMEM249-201ENST00000561638 DSCR10P59022 87 aa12.85□□□□□ -0.35
TMEM249-201ENST00000561638 ZCCHC13Q8WW36 166 aaKnown RBP12.85□□□□□ -0.35
TMEM249-201ENST00000561638 TRAV22A0A0B4J277 110 aa12.81□□□□□ -0.36
TMEM249-201ENST00000561638 H3BPC8 53 aa12.81□□□□□ -0.36
TMEM249-201ENST00000561638 K7EQZ3 153 aa12.81□□□□□ -0.36
TMEM249-201ENST00000561638 LPAP08519 4548 aa12.8□□□□□ -0.36
TMEM249-201ENST00000561638 NDUFS5O43920 106 aa12.8□□□□□ -0.36
TMEM249-201ENST00000561638 LINC00313P59037 77 aa12.8□□□□□ -0.36
TMEM249-201ENST00000561638 MP68P56378 58 aa12.79□□□□□ -0.36
TMEM249-201ENST00000561638 Q8N9L7 120 aa12.79□□□□□ -0.36
TMEM249-201ENST00000561638 SPANXA2-OT1Q8N9U9 137 aa12.76□□□□□ -0.37
TMEM249-201ENST00000561638 C8orf87E5RJ46 101 aa12.76□□□□□ -0.37
TMEM249-201ENST00000561638 KTN1-AS1Q86SY8 53 aa12.76□□□□□ -0.37
TMEM249-201ENST00000561638 NOTCH2NLQ7Z3S9 236 aa12.75□□□□□ -0.37
TMEM249-201ENST00000561638 XP32Q5T750 250 aa12.74□□□□□ -0.37
TMEM249-201ENST00000561638 C8orf17Q9NRJ1 99 aa12.72□□□□□ -0.37
TMEM249-201ENST00000561638 LRP2P98164 4655 aa12.71□□□□□ -0.37
TMEM249-201ENST00000561638 PSPHP1O15172 72 aa12.71□□□□□ -0.38
TMEM249-201ENST00000561638 HCG22E2RYF7 251 aa12.7□□□□□ -0.38
TMEM249-201ENST00000561638 ATP11AUNQ6ZP68 121 aa12.69□□□□□ -0.38
TMEM249-201ENST00000561638 MMP24-AS1A0A0U1RRL7 71 aa12.64□□□□□ -0.39
TMEM249-201ENST00000561638 KRTAP16-1A8MUX0 517 aa12.62□□□□□ -0.39
TMEM249-201ENST00000561638 LINC00208Q96KT6 92 aa12.62□□□□□ -0.39
TMEM249-201ENST00000561638 A8MUN3 132 aa12.61□□□□□ -0.39
TMEM249-201ENST00000561638 WFDC13Q8IUB5 93 aa12.61□□□□□ -0.39
TMEM249-201ENST00000561638 CHKB-CPT1BH3BT56 60 aa12.61□□□□□ -0.39
TMEM249-201ENST00000561638 Q5VV11 94 aa12.61□□□□□ -0.39
TMEM249-201ENST00000561638 CASC2Q6XLA1 102 aa12.59□□□□□ -0.39
TMEM249-201ENST00000561638 Q75L30 129 aa12.58□□□□□ -0.39
TMEM249-201ENST00000561638 RPL37P61927 97 aaKnown RBP12.57□□□□□ -0.4
TMEM249-201ENST00000561638 C20orf166-AS1Q96NR2 134 aa12.57□□□□□ -0.4
TMEM249-201ENST00000561638 MRPL34Q9BQ48 92 aaKnown RBP12.56□□□□□ -0.4
TMEM249-201ENST00000561638 A8MUU9 505 aa12.55□□□□□ -0.4
TMEM249-201ENST00000561638 SEC61BP60468 96 aaKnown RBP12.53□□□□□ -0.4
TMEM249-201ENST00000561638 Q8N9P0 234 aaPredicted RBP12.53□□□□□ -0.4
TMEM249-201ENST00000561638 LOC101927531A0A1B0GV80 90 aa12.52□□□□□ -0.41
TMEM249-201ENST00000561638 PRR15LQ9BU68 103 aa12.51□□□□□ -0.41
TMEM249-201ENST00000561638 RBM12B-AS1Q9P1G2 102 aa12.48□□□□□ -0.41
TMEM249-201ENST00000561638 CDC42SE1Q9NRR8 79 aa12.48□□□□□ -0.41
TMEM249-201ENST00000561638 A6NED7 52 aa12.47□□□□□ -0.41
TMEM249-201ENST00000561638 PCOTHQ58A44 107 aa12.47□□□□□ -0.41
TMEM249-201ENST00000561638 C7orf65Q6ZTY9 151 aa12.45□□□□□ -0.42
TMEM249-201ENST00000561638 UBR4Q5T4S7 5183 aa12.45□□□□□ -0.42
TMEM249-201ENST00000561638 H0Y9P7 68 aa12.43□□□□□ -0.42
TMEM249-201ENST00000561638 SPTSSBQ8NFR3 76 aa12.43□□□□□ -0.42
TMEM249-201ENST00000561638 A6NN06 94 aa12.38□□□□□ -0.43
TMEM249-201ENST00000561638 LCA10Q71F78 164 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms