RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 HRES1P13985 223 aa12.71□□□□□ -0.37
NME3-202ENST00000561637 DSCR8Q96T75 97 aa12.71□□□□□ -0.37
NME3-202ENST00000561637 A0A1B0GVX0 72 aa12.7□□□□□ -0.38
NME3-202ENST00000561637 KRTAP19-1Q8IUB9 90 aa12.7□□□□□ -0.38
NME3-202ENST00000561637 MPLKIPQ8TAP9 179 aa12.67□□□□□ -0.38
NME3-202ENST00000561637 FAM236DA0A1B0GTK5 79 aa12.64□□□□□ -0.39
NME3-202ENST00000561637 C9JAW5 83 aa12.64□□□□□ -0.39
NME3-202ENST00000561637 FAM236CP0DP71 79 aa12.64□□□□□ -0.39
NME3-202ENST00000561637 C8orf87E5RJ46 101 aa12.62□□□□□ -0.39
NME3-202ENST00000561637 Q6ZQT0 140 aa12.62□□□□□ -0.39
NME3-202ENST00000561637 LCE2BO14633 110 aa12.61□□□□□ -0.39
NME3-202ENST00000561637 M0R143 59 aa12.59□□□□□ -0.39
NME3-202ENST00000561637 ATXN8Q156A1 80 aa12.58□□□□□ -0.4
NME3-202ENST00000561637 MACF1Q9UPN3 7388 aaKnown RBP12.57□□□□□ -0.4
NME3-202ENST00000561637 MT2AP02795 61 aa12.56□□□□□ -0.4
NME3-202ENST00000561637 J3KT08 172 aa12.54□□□□□ -0.4
NME3-202ENST00000561637 ZCCHC13Q8WW36 166 aaKnown RBP12.54□□□□□ -0.4
NME3-202ENST00000561637 RBM12B-AS1Q9P1G2 102 aa12.54□□□□□ -0.4
NME3-202ENST00000561637 SYNE2Q8WXH0 6885 aaKnown RBP12.52□□□□□ -0.41
NME3-202ENST00000561637 LOC110117498A0A087WWA1 95 aa12.51□□□□□ -0.41
NME3-202ENST00000561637 C14orf132Q9NPU4 83 aa12.51□□□□□ -0.41
NME3-202ENST00000561637 JMJD7-PLA2G4BH0Y9G9 81 aa12.48□□□□□ -0.41
NME3-202ENST00000561637 MT1FP04733 61 aa12.48□□□□□ -0.41
NME3-202ENST00000561637 IGKV3D-7A0A0C4DH55 119 aa12.47□□□□□ -0.41
NME3-202ENST00000561637 SMIM6P0DI80 62 aa12.47□□□□□ -0.41
NME3-202ENST00000561637 C8orf17Q9NRJ1 99 aa12.47□□□□□ -0.41
NME3-202ENST00000561637 C21orf62-AS1Q17RA5 79 aa12.46□□□□□ -0.41
NME3-202ENST00000561637 Q8N9P0 234 aaPredicted RBP12.46□□□□□ -0.41
NME3-202ENST00000561637 KRTAP9-3Q9BYQ3 159 aa12.46□□□□□ -0.41
NME3-202ENST00000561637 A8MWP4 228 aa12.45□□□□□ -0.42
NME3-202ENST00000561637 SPINK7P58062 85 aa12.45□□□□□ -0.42
NME3-202ENST00000561637 BATFQ16520 125 aa12.44□□□□□ -0.42
NME3-202ENST00000561637 NDUFB1O75438 58 aa12.43□□□□□ -0.42
NME3-202ENST00000561637 PDE6GP18545 87 aa12.36□□□□□ -0.43
NME3-202ENST00000561637 A0A1B0GW54 56 aa12.35□□□□□ -0.43
NME3-202ENST00000561637 MTURNQ8N3F0 131 aa12.35□□□□□ -0.43
NME3-202ENST00000561637 Q6ZVQ6 151 aa12.34□□□□□ -0.43
NME3-202ENST00000561637 KRTAP10-10P60014 251 aa12.33□□□□□ -0.44
NME3-202ENST00000561637 LYRM7Q5U5X0 104 aa12.33□□□□□ -0.44
NME3-202ENST00000561637 PRR15Q8IV56 129 aa12.33□□□□□ -0.44
NME3-202ENST00000561637 NREPQ16612 68 aa12.31□□□□□ -0.44
NME3-202ENST00000561637 WFDC13Q8IUB5 93 aa12.31□□□□□ -0.44
NME3-202ENST00000561637 MMP24-AS1A0A0U1RRL7 71 aa12.3□□□□□ -0.44
NME3-202ENST00000561637 TSTD3H0UI37 97 aa12.3□□□□□ -0.44
NME3-202ENST00000561637 TAX1BP3O14907 124 aa12.27□□□□□ -0.45
NME3-202ENST00000561637 C9orf118A6NHY6 69 aa12.26□□□□□ -0.45
NME3-202ENST00000561637 K7EQZ3 153 aa12.24□□□□□ -0.45
NME3-202ENST00000561637 KRTAP19-6Q3LI70 58 aa12.24□□□□□ -0.45
NME3-202ENST00000561637 LOC105371267A0A1B0GV96 52 aa12.22□□□□□ -0.45
NME3-202ENST00000561637 A0A1W2PPM0 123 aa12.22□□□□□ -0.45
NME3-202ENST00000561637 TMEM254Q8TBM7 123 aa12.22□□□□□ -0.45
NME3-202ENST00000561637 MRPL34Q9BQ48 92 aaKnown RBP12.22□□□□□ -0.45
NME3-202ENST00000561637 H3BT86 120 aa12.21□□□□□ -0.45
NME3-202ENST00000561637 LINC00846Q9NV44 126 aa12.17□□□□□ -0.46
NME3-202ENST00000561637 hDV103S1A0JD37 113 aa12.15□□□□□ -0.46
NME3-202ENST00000561637 KRTAP6-3Q3LI67 103 aa12.15□□□□□ -0.46
NME3-202ENST00000561637 NDUFS5O43920 106 aa12.12□□□□□ -0.47
NME3-202ENST00000561637 Q8N9L7 120 aa12.11□□□□□ -0.47
NME3-202ENST00000561637 BPY2O14599 106 aa12.09□□□□□ -0.47
NME3-202ENST00000561637 Q5W150 140 aa12.08□□□□□ -0.48
NME3-202ENST00000561637 SMCPP49901 116 aaPredicted RBP12.07□□□□□ -0.48
NME3-202ENST00000561637 SPCS1Q9Y6A9 102 aa12.04□□□□□ -0.48
NME3-202ENST00000561637 IGKV2D-30A0A075B6S6 120 aa12.03□□□□□ -0.48
NME3-202ENST00000561637 IGKV2-30P06310 120 aa12.03□□□□□ -0.48
NME3-202ENST00000561637 H1FX-AS1Q4G0G2 97 aa11.99□□□□□ -0.49
NME3-202ENST00000561637 CASC2Q6XLA1 102 aa11.96□□□□□ -0.49
NME3-202ENST00000561637 HCG22E2RYF7 251 aa11.94□□□□□ -0.5
NME3-202ENST00000561637 C7orf65Q6ZTY9 151 aa11.93□□□□□ -0.5
NME3-202ENST00000561637 PRO0461Q9UI25 63 aa11.92□□□□□ -0.5
NME3-202ENST00000561637 C4orf26Q17RF5 130 aa11.85□□□□□ -0.51
NME3-202ENST00000561637 K7EP34 96 aa11.82□□□□□ -0.52
NME3-202ENST00000561637 COL5A1-AS1Q5SY13 56 aa11.82□□□□□ -0.52
NME3-202ENST00000561637 NEBP20929 6669 aa11.81□□□□□ -0.52
NME3-202ENST00000561637 CXCL6P80162 114 aa11.78□□□□□ -0.52
NME3-202ENST00000561637 UBL5Q9BZL1 73 aa11.77□□□□□ -0.53
NME3-202ENST00000561637 KRTAP3-1Q9BYR8 98 aa11.72□□□□□ -0.53
NME3-202ENST00000561637 MUC12Q9UKN1 5478 aa11.7□□□□□ -0.54
NME3-202ENST00000561637 C5orf47Q569G3 176 aa11.66□□□□□ -0.54
NME3-202ENST00000561637 KRTAP20-1Q3LI63 56 aa11.63□□□□□ -0.55
NME3-202ENST00000561637 ETDBQ3ZM63 59 aa11.58□□□□□ -0.56
NME3-202ENST00000561637 C1orf64Q8NEQ6 169 aa11.57□□□□□ -0.56
NME3-202ENST00000561637 S4R3F8 94 aa11.56□□□□□ -0.56
NME3-202ENST00000561637 GTF2H5Q6ZYL4 71 aa11.55□□□□□ -0.56
NME3-202ENST00000561637 PCP4L1A6NKN8 68 aa11.53□□□□□ -0.56
NME3-202ENST00000561637 LCA10Q71F78 164 aa11.52□□□□□ -0.57
NME3-202ENST00000561637 F8W1H4 67 aa11.5□□□□□ -0.57
NME3-202ENST00000561637 FAM236AA0A1B0GUQ0 79 aa11.48□□□□□ -0.57
NME3-202ENST00000561637 FAM236BA0A1B0GV22 79 aa11.48□□□□□ -0.57
NME3-202ENST00000561637 TP53AIP1Q9HCN2 124 aa11.48□□□□□ -0.57
NME3-202ENST00000561637 CSAG1Q6PB30 78 aa11.43□□□□□ -0.58
NME3-202ENST00000561637 MT1BP07438 61 aa11.41□□□□□ -0.58
NME3-202ENST00000561637 KRTAP3-3Q9BYR6 98 aa11.39□□□□□ -0.59
NME3-202ENST00000561637 A0A087WVE0 104 aa11.38□□□□□ -0.59
NME3-202ENST00000561637 CYP4F30PQ9H0H9 118 aa11.38□□□□□ -0.59
NME3-202ENST00000561637 A6NN06 94 aa11.36□□□□□ -0.59
NME3-202ENST00000561637 SPRR2GQ9BYE4 73 aa11.33□□□□□ -0.6
NME3-202ENST00000561637 KRTAP19-8Q3LI54 63 aa11.31□□□□□ -0.6
NME3-202ENST00000561637 TRAV22A0A0B4J277 110 aa11.28□□□□□ -0.6
NME3-202ENST00000561637 Q5VV11 94 aa11.28□□□□□ -0.6
NME3-202ENST00000561637 KRTAP5-9P26371 169 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 1044.7 ms