RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 H3BT86 120 aa7.26□□□□□ -1.25
TPM1-230ENST00000561266 SPCS1Q9Y6A9 102 aa7.26□□□□□ -1.25
TPM1-230ENST00000561266 IGHV6-1A0A0B4J1U7 121 aa7.25□□□□□ -1.25
TPM1-230ENST00000561266 PCP4L1A6NKN8 68 aa7.25□□□□□ -1.25
TPM1-230ENST00000561266 COL5A1-AS1Q5SY13 56 aa7.25□□□□□ -1.25
TPM1-230ENST00000561266 ATP11AUNQ6ZP68 121 aa7.24□□□□□ -1.25
TPM1-230ENST00000561266 A0A1B0GVX0 72 aa7.23□□□□□ -1.25
TPM1-230ENST00000561266 KRTAP3-3Q9BYR6 98 aa7.23□□□□□ -1.25
TPM1-230ENST00000561266 KRTAP3-2Q9BYR7 98 aa7.23□□□□□ -1.25
TPM1-230ENST00000561266 PDE6GP18545 87 aa7.22□□□□□ -1.25
TPM1-230ENST00000561266 PRO0461Q9UI25 63 aa7.22□□□□□ -1.25
TPM1-230ENST00000561266 MT1HP80294 61 aa7.21□□□□□ -1.26
TPM1-230ENST00000561266 A0A1B0GW54 56 aa7.19□□□□□ -1.26
TPM1-230ENST00000561266 IGKV3D-7A0A0C4DH55 119 aa7.18□□□□□ -1.26
TPM1-230ENST00000561266 K7EP34 96 aa7.18□□□□□ -1.26
TPM1-230ENST00000561266 C21orf62-AS1Q17RA5 79 aa7.18□□□□□ -1.26
TPM1-230ENST00000561266 FLGP20930 4061 aaPredicted RBP7.18□□□□□ -1.26
TPM1-230ENST00000561266 J3KT08 172 aa7.17□□□□□ -1.26
TPM1-230ENST00000561266 C8orf87E5RJ46 101 aa7.16□□□□□ -1.26
TPM1-230ENST00000561266 A8MWP4 228 aa7.15□□□□□ -1.26
TPM1-230ENST00000561266 NREPQ16612 68 aa7.14□□□□□ -1.27
TPM1-230ENST00000561266 C8orf17Q9NRJ1 99 aa7.13□□□□□ -1.27
TPM1-230ENST00000561266 PRR15Q8IV56 129 aa7.11□□□□□ -1.27
TPM1-230ENST00000561266 NDUFB1O75438 58 aa7.1□□□□□ -1.27
TPM1-230ENST00000561266 COX6B2Q6YFQ2 88 aa7.09□□□□□ -1.27
TPM1-230ENST00000561266 Q8N9P0 234 aaPredicted RBP7.09□□□□□ -1.27
TPM1-230ENST00000561266 MMP24-AS1A0A0U1RRL7 71 aa7.08□□□□□ -1.28
TPM1-230ENST00000561266 K7EQZ3 153 aa7.08□□□□□ -1.28
TPM1-230ENST00000561266 Q6ZVQ6 151 aa7.08□□□□□ -1.28
TPM1-230ENST00000561266 KRTAP9-2Q9BYQ4 174 aa7.08□□□□□ -1.28
TPM1-230ENST00000561266 HRES1P13985 223 aa7.06□□□□□ -1.28
TPM1-230ENST00000561266 ZCCHC13Q8WW36 166 aaKnown RBP7.06□□□□□ -1.28
TPM1-230ENST00000561266 LINC00846Q9NV44 126 aa7.05□□□□□ -1.28
TPM1-230ENST00000561266 LORP23490 312 aaPredicted RBP7.04□□□□□ -1.28
TPM1-230ENST00000561266 KRTAP10-6P60371 365 aaPredicted RBP7.04□□□□□ -1.28
TPM1-230ENST00000561266 GTF2H5Q6ZYL4 71 aa7.04□□□□□ -1.28
TPM1-230ENST00000561266 Q8N9L7 120 aa7.04□□□□□ -1.28
TPM1-230ENST00000561266 BPY2O14599 106 aa7.03□□□□□ -1.28
TPM1-230ENST00000561266 MPLKIPQ8TAP9 179 aa7.03□□□□□ -1.28
TPM1-230ENST00000561266 ETDBQ3ZM63 59 aa7.02□□□□□ -1.29
TPM1-230ENST00000561266 F8W1H4 67 aa7.01□□□□□ -1.29
TPM1-230ENST00000561266 TMEM254Q8TBM7 123 aa7□□□□□ -1.29
TPM1-230ENST00000561266 MRPL34Q9BQ48 92 aaKnown RBP7□□□□□ -1.29
TPM1-230ENST00000561266 hDV103S1A0JD37 113 aa6.98□□□□□ -1.29
TPM1-230ENST00000561266 M0R2T5 61 aa6.98□□□□□ -1.29
TPM1-230ENST00000561266 SPINK7P58062 85 aa6.97□□□□□ -1.29
TPM1-230ENST00000561266 WFDC13Q8IUB5 93 aa6.96□□□□□ -1.3
TPM1-230ENST00000561266 Q5W150 140 aa6.93□□□□□ -1.3
TPM1-230ENST00000561266 UBL5Q9BZL1 73 aa6.93□□□□□ -1.3
TPM1-230ENST00000561266 NDUFS5O43920 106 aa6.91□□□□□ -1.3
TPM1-230ENST00000561266 CASC2Q6XLA1 102 aa6.91□□□□□ -1.3
TPM1-230ENST00000561266 FAM236DA0A1B0GTK5 79 aa6.9□□□□□ -1.3
TPM1-230ENST00000561266 FAM236CP0DP71 79 aa6.9□□□□□ -1.3
TPM1-230ENST00000561266 A0A1B0GV90 55 aa6.89□□□□□ -1.31
TPM1-230ENST00000561266 RBM12B-AS1Q9P1G2 102 aa6.89□□□□□ -1.31
TPM1-230ENST00000561266 HCG22E2RYF7 251 aa6.87□□□□□ -1.31
TPM1-230ENST00000561266 KRTAP9-8Q9BYQ0 159 aa6.87□□□□□ -1.31
TPM1-230ENST00000561266 CXCL6P80162 114 aa6.82□□□□□ -1.32
TPM1-230ENST00000561266 IGKV2D-30A0A075B6S6 120 aa6.8□□□□□ -1.32
TPM1-230ENST00000561266 IGKV2-30P06310 120 aa6.8□□□□□ -1.32
TPM1-230ENST00000561266 MT2AP02795 61 aa6.78□□□□□ -1.32
TPM1-230ENST00000561266 KRTAP9-6A0A140TA67 174 aa6.76□□□□□ -1.33
TPM1-230ENST00000561266 FAM240AA0A1B0GVK7 77 aa6.76□□□□□ -1.33
TPM1-230ENST00000561266 ACYP1P07311 99 aa6.76□□□□□ -1.33
TPM1-230ENST00000561266 C7orf65Q6ZTY9 151 aa6.75□□□□□ -1.33
TPM1-230ENST00000561266 MT1FP04733 61 aa6.74□□□□□ -1.33
TPM1-230ENST00000561266 FSIP2Q5CZC0 6907 aa6.71□□□□□ -1.34
TPM1-230ENST00000561266 C4orf26Q17RF5 130 aa6.7□□□□□ -1.34
TPM1-230ENST00000561266 H1FX-AS1Q4G0G2 97 aa6.69□□□□□ -1.34
TPM1-230ENST00000561266 CRCT1Q9UGL9 99 aa6.69□□□□□ -1.34
TPM1-230ENST00000561266 KRTAP3-1Q9BYR8 98 aa6.68□□□□□ -1.34
TPM1-230ENST00000561266 A0A087WVE0 104 aa6.66□□□□□ -1.34
TPM1-230ENST00000561266 ATP5EP2Q5VTU8 51 aa6.66□□□□□ -1.34
TPM1-230ENST00000561266 TP53AIP1Q9HCN2 124 aa6.66□□□□□ -1.34
TPM1-230ENST00000561266 HIST1H4AP62805 103 aaKnown RBP6.65□□□□□ -1.34
TPM1-230ENST00000561266 KRTAP9-3Q9BYQ3 159 aa6.65□□□□□ -1.34
TPM1-230ENST00000561266 KRTAP10-10P60014 251 aa6.64□□□□□ -1.35
TPM1-230ENST00000561266 LINC00643Q86TS7 51 aa6.64□□□□□ -1.35
TPM1-230ENST00000561266 LCE2BO14633 110 aa6.61□□□□□ -1.35
TPM1-230ENST00000561266 CYP4F30PQ9H0H9 118 aa6.59□□□□□ -1.35
TPM1-230ENST00000561266 TRAV22A0A0B4J277 110 aa6.57□□□□□ -1.36
TPM1-230ENST00000561266 C1orf64Q8NEQ6 169 aa6.57□□□□□ -1.36
TPM1-230ENST00000561266 UQCRQO14949 82 aa6.53□□□□□ -1.36
TPM1-230ENST00000561266 USH2AO75445 5202 aa6.53□□□□□ -1.36
TPM1-230ENST00000561266 H0Y9P7 68 aa6.52□□□□□ -1.37
TPM1-230ENST00000561266 LOC101927531A0A1B0GV80 90 aa6.5□□□□□ -1.37
TPM1-230ENST00000561266 C5orf47Q569G3 176 aa6.5□□□□□ -1.37
TPM1-230ENST00000561266 OCR1Q9BZK8 76 aa6.5□□□□□ -1.37
TPM1-230ENST00000561266 J3QR89 54 aa6.49□□□□□ -1.37
TPM1-230ENST00000561266 LCA10Q71F78 164 aa6.49□□□□□ -1.37
TPM1-230ENST00000561266 S4R3F8 94 aa6.48□□□□□ -1.37
TPM1-230ENST00000561266 SSPOA2VEC9 5147 aa6.45□□□□□ -1.38
TPM1-230ENST00000561266 KLKP1Q107X0 134 aa6.45□□□□□ -1.38
TPM1-230ENST00000561266 ATOX1O00244 68 aa6.43□□□□□ -1.38
TPM1-230ENST00000561266 LINC00208Q96KT6 92 aa6.43□□□□□ -1.38
TPM1-230ENST00000561266 MT-ATP8P03928 68 aa6.42□□□□□ -1.38
TPM1-230ENST00000561266 K7ERU9 68 aa6.41□□□□□ -1.38
TPM1-230ENST00000561266 KRTAP19-1Q8IUB9 90 aa6.4□□□□□ -1.38
TPM1-230ENST00000561266 CSAG1Q6PB30 78 aa6.39□□□□□ -1.39
TPM1-230ENST00000561266 MP68P56378 58 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms