RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 KRTAP10-10P60014 251 aa13.38□□□□□ -0.27
SNRPA1-215ENST00000561187 FCGBPQ9Y6R7 5405 aaPredicted RBP13.38□□□□□ -0.27
SNRPA1-215ENST00000561187 LCE2BO14633 110 aa13.37□□□□□ -0.27
SNRPA1-215ENST00000561187 A0A1B0GVX0 72 aa13.35□□□□□ -0.27
SNRPA1-215ENST00000561187 UBE2V1Q13404 147 aa13.34□□□□□ -0.27
SNRPA1-215ENST00000561187 PYY3Q5JQD4 70 aa13.33□□□□□ -0.28
SNRPA1-215ENST00000561187 C8orf87E5RJ46 101 aa13.31□□□□□ -0.28
SNRPA1-215ENST00000561187 KRTAP9-3Q9BYQ3 159 aa13.31□□□□□ -0.28
SNRPA1-215ENST00000561187 KRTAP19-1Q8IUB9 90 aa13.3□□□□□ -0.28
SNRPA1-215ENST00000561187 RBM3P98179 157 aaKnown RBP13.28□□□□□ -0.28
SNRPA1-215ENST00000561187 SCGB1C2P0DMR2 95 aa13.27□□□□□ -0.29
SNRPA1-215ENST00000561187 ZCCHC13Q8WW36 166 aaKnown RBP13.27□□□□□ -0.29
SNRPA1-215ENST00000561187 DSCR8Q96T75 97 aa13.27□□□□□ -0.29
SNRPA1-215ENST00000561187 SPINK7P58062 85 aa13.22□□□□□ -0.29
SNRPA1-215ENST00000561187 MTURNQ8N3F0 131 aa13.22□□□□□ -0.29
SNRPA1-215ENST00000561187 UQCR10Q9UDW1 63 aa13.19□□□□□ -0.3
SNRPA1-215ENST00000561187 C9JAW5 83 aa13.16□□□□□ -0.3
SNRPA1-215ENST00000561187 BAALC-AS2P0C853 105 aa13.16□□□□□ -0.3
SNRPA1-215ENST00000561187 J3KT08 172 aa13.15□□□□□ -0.3
SNRPA1-215ENST00000561187 Q6ZQT0 140 aa13.13□□□□□ -0.31
SNRPA1-215ENST00000561187 LYRM7Q5U5X0 104 aa13.12□□□□□ -0.31
SNRPA1-215ENST00000561187 WFDC13Q8IUB5 93 aa13.12□□□□□ -0.31
SNRPA1-215ENST00000561187 NDUFB1O75438 58 aa13.1□□□□□ -0.31
SNRPA1-215ENST00000561187 Q8N9P0 234 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-215ENST00000561187 C8orf17Q9NRJ1 99 aa13.08□□□□□ -0.32
SNRPA1-215ENST00000561187 TMA7Q9Y2S6 64 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-215ENST00000561187 NAA38Q9BRA0 125 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-215ENST00000561187 MACF1Q9UPN3 7388 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-215ENST00000561187 C21orf62-AS1Q17RA5 79 aa13.04□□□□□ -0.32
SNRPA1-215ENST00000561187 A8MWP4 228 aa13.03□□□□□ -0.32
SNRPA1-215ENST00000561187 IGKV3D-7A0A0C4DH55 119 aa13.01□□□□□ -0.33
SNRPA1-215ENST00000561187 SYNE2Q8WXH0 6885 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-215ENST00000561187 Q6ZVQ6 151 aa12.96□□□□□ -0.33
SNRPA1-215ENST00000561187 ATXN8Q156A1 80 aa12.95□□□□□ -0.34
SNRPA1-215ENST00000561187 C14orf132Q9NPU4 83 aa12.95□□□□□ -0.34
SNRPA1-215ENST00000561187 LOC110117498A0A087WWA1 95 aa12.93□□□□□ -0.34
SNRPA1-215ENST00000561187 JMJD7-PLA2G4BH0Y9G9 81 aa12.93□□□□□ -0.34
SNRPA1-215ENST00000561187 KRTAP19-6Q3LI70 58 aa12.89□□□□□ -0.35
SNRPA1-215ENST00000561187 PRR15Q8IV56 129 aa12.87□□□□□ -0.35
SNRPA1-215ENST00000561187 LINC00846Q9NV44 126 aa12.86□□□□□ -0.35
SNRPA1-215ENST00000561187 MMP24-AS1A0A0U1RRL7 71 aa12.84□□□□□ -0.35
SNRPA1-215ENST00000561187 NREPQ16612 68 aa12.83□□□□□ -0.36
SNRPA1-215ENST00000561187 A0A1B0GW54 56 aa12.82□□□□□ -0.36
SNRPA1-215ENST00000561187 M0R143 59 aa12.82□□□□□ -0.36
SNRPA1-215ENST00000561187 PDE6GP18545 87 aa12.82□□□□□ -0.36
SNRPA1-215ENST00000561187 MRPL34Q9BQ48 92 aaKnown RBP12.82□□□□□ -0.36
SNRPA1-215ENST00000561187 NDUFS5O43920 106 aa12.81□□□□□ -0.36
SNRPA1-215ENST00000561187 TMEM254Q8TBM7 123 aa12.8□□□□□ -0.36
SNRPA1-215ENST00000561187 K7EQZ3 153 aa12.76□□□□□ -0.37
SNRPA1-215ENST00000561187 H1FX-AS1Q4G0G2 97 aa12.76□□□□□ -0.37
SNRPA1-215ENST00000561187 IGKV2D-30A0A075B6S6 120 aa12.73□□□□□ -0.37
SNRPA1-215ENST00000561187 hDV103S1A0JD37 113 aa12.73□□□□□ -0.37
SNRPA1-215ENST00000561187 IGKV2-30P06310 120 aa12.73□□□□□ -0.37
SNRPA1-215ENST00000561187 BATFQ16520 125 aa12.65□□□□□ -0.38
SNRPA1-215ENST00000561187 Q5W150 140 aa12.62□□□□□ -0.39
SNRPA1-215ENST00000561187 C7orf65Q6ZTY9 151 aa12.61□□□□□ -0.39
SNRPA1-215ENST00000561187 BPY2O14599 106 aa12.57□□□□□ -0.4
SNRPA1-215ENST00000561187 Q8N9L7 120 aa12.57□□□□□ -0.4
SNRPA1-215ENST00000561187 C4orf26Q17RF5 130 aa12.52□□□□□ -0.41
SNRPA1-215ENST00000561187 H3BT86 120 aa12.51□□□□□ -0.41
SNRPA1-215ENST00000561187 HCG22E2RYF7 251 aa12.5□□□□□ -0.41
SNRPA1-215ENST00000561187 SMCPP49901 116 aaPredicted RBP12.5□□□□□ -0.41
SNRPA1-215ENST00000561187 CASC2Q6XLA1 102 aa12.48□□□□□ -0.41
SNRPA1-215ENST00000561187 TSTD3H0UI37 97 aa12.47□□□□□ -0.41
SNRPA1-215ENST00000561187 KRTAP6-3Q3LI67 103 aa12.47□□□□□ -0.41
SNRPA1-215ENST00000561187 SMIM6P0DI80 62 aa12.46□□□□□ -0.41
SNRPA1-215ENST00000561187 C5orf47Q569G3 176 aa12.44□□□□□ -0.42
SNRPA1-215ENST00000561187 C9orf118A6NHY6 69 aa12.42□□□□□ -0.42
SNRPA1-215ENST00000561187 FAM236AA0A1B0GUQ0 79 aa12.4□□□□□ -0.42
SNRPA1-215ENST00000561187 FAM236BA0A1B0GV22 79 aa12.4□□□□□ -0.42
SNRPA1-215ENST00000561187 A0A1W2PPM0 123 aa12.4□□□□□ -0.42
SNRPA1-215ENST00000561187 TAX1BP3O14907 124 aa12.38□□□□□ -0.43
SNRPA1-215ENST00000561187 CXCL6P80162 114 aa12.32□□□□□ -0.44
SNRPA1-215ENST00000561187 S4R3F8 94 aa12.28□□□□□ -0.44
SNRPA1-215ENST00000561187 KRTAP3-1Q9BYR8 98 aa12.27□□□□□ -0.45
SNRPA1-215ENST00000561187 A6NN06 94 aa12.25□□□□□ -0.45
SNRPA1-215ENST00000561187 SPCS1Q9Y6A9 102 aa12.24□□□□□ -0.45
SNRPA1-215ENST00000561187 MT1BP07438 61 aa12.23□□□□□ -0.45
SNRPA1-215ENST00000561187 NEBP20929 6669 aa12.22□□□□□ -0.45
SNRPA1-215ENST00000561187 LOC100996750A0A140TA64 210 aa12.21□□□□□ -0.45
SNRPA1-215ENST00000561187 KRTAP4-6Q9BYQ5 205 aa12.21□□□□□ -0.45
SNRPA1-215ENST00000561187 Q5VV11 94 aa12.19□□□□□ -0.46
SNRPA1-215ENST00000561187 LCA10Q71F78 164 aa12.19□□□□□ -0.46
SNRPA1-215ENST00000561187 C1orf64Q8NEQ6 169 aa12.19□□□□□ -0.46
SNRPA1-215ENST00000561187 UBL5Q9BZL1 73 aa12.17□□□□□ -0.46
SNRPA1-215ENST00000561187 CSAG1Q6PB30 78 aa12.16□□□□□ -0.46
SNRPA1-215ENST00000561187 MUC12Q9UKN1 5478 aa12.15□□□□□ -0.46
SNRPA1-215ENST00000561187 SPRR2GQ9BYE4 73 aa12.1□□□□□ -0.47
SNRPA1-215ENST00000561187 KRTAP19-8Q3LI54 63 aa12.09□□□□□ -0.47
SNRPA1-215ENST00000561187 PRO0461Q9UI25 63 aa12.03□□□□□ -0.48
SNRPA1-215ENST00000561187 KLKP1Q107X0 134 aa12□□□□□ -0.49
SNRPA1-215ENST00000561187 KRTAP10-5P60370 271 aa11.99□□□□□ -0.49
SNRPA1-215ENST00000561187 LOC105371267A0A1B0GV96 52 aa11.97□□□□□ -0.49
SNRPA1-215ENST00000561187 TP53AIP1Q9HCN2 124 aa11.95□□□□□ -0.5
SNRPA1-215ENST00000561187 K7EP34 96 aa11.93□□□□□ -0.5
SNRPA1-215ENST00000561187 A0A087WVE0 104 aa11.9□□□□□ -0.5
SNRPA1-215ENST00000561187 COL5A1-AS1Q5SY13 56 aa11.87□□□□□ -0.51
SNRPA1-215ENST00000561187 IMUPQ9GZP8 106 aa11.85□□□□□ -0.51
SNRPA1-215ENST00000561187 CYP4F30PQ9H0H9 118 aa11.84□□□□□ -0.51
SNRPA1-215ENST00000561187 KRTAP20-1Q3LI63 56 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms