RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 SPINK6Q6UWN8 80 aa8.59□□□□□ -1.03
CRTC3-210ENST00000560927 SPANXA2-OT1Q8N9U9 137 aa8.59□□□□□ -1.03
CRTC3-210ENST00000560927 NDUFS5O43920 106 aa8.59□□□□□ -1.03
CRTC3-210ENST00000560927 TP53AIP1Q9HCN2 124 aa8.58□□□□□ -1.04
CRTC3-210ENST00000560927 PKD1P98161 4303 aa8.57□□□□□ -1.04
CRTC3-210ENST00000560927 MRPL34Q9BQ48 92 aaKnown RBP8.57□□□□□ -1.04
CRTC3-210ENST00000560927 LRP1BQ9NZR2 4599 aa8.57□□□□□ -1.04
CRTC3-210ENST00000560927 SEC61GP60059 68 aa8.56□□□□□ -1.04
CRTC3-210ENST00000560927 PCOTHQ58A44 107 aa8.55□□□□□ -1.04
CRTC3-210ENST00000560927 FAT2Q9NYQ8 4349 aa8.55□□□□□ -1.04
CRTC3-210ENST00000560927 KRTAP10-1P60331 282 aa8.55□□□□□ -1.04
CRTC3-210ENST00000560927 Q1T7F1 81 aa8.54□□□□□ -1.04
CRTC3-210ENST00000560927 V9GYY9 64 aa8.54□□□□□ -1.04
CRTC3-210ENST00000560927 CD164Q04900 197 aa8.52□□□□□ -1.05
CRTC3-210ENST00000560927 Q6ZSA8 131 aa8.52□□□□□ -1.05
CRTC3-210ENST00000560927 SSBP3-AS1Q7Z2R9 100 aa8.52□□□□□ -1.05
CRTC3-210ENST00000560927 IGLV7-46A0A075B6I9 117 aa8.51□□□□□ -1.05
CRTC3-210ENST00000560927 BRK1Q8WUW1 75 aa8.51□□□□□ -1.05
CRTC3-210ENST00000560927 C1orf195Q5TG92 126 aa8.5□□□□□ -1.05
CRTC3-210ENST00000560927 KRTAP13-2Q52LG2 175 aa8.49□□□□□ -1.05
CRTC3-210ENST00000560927 PSPHP1O15172 72 aa8.48□□□□□ -1.05
CRTC3-210ENST00000560927 Q5W150 140 aa8.46□□□□□ -1.05
CRTC3-210ENST00000560927 COA5Q86WW8 74 aa8.44□□□□□ -1.06
CRTC3-210ENST00000560927 VPS13BQ7Z7G8 4022 aa8.44□□□□□ -1.06
CRTC3-210ENST00000560927 KRTAP13-3Q3SY46 172 aa8.42□□□□□ -1.06
CRTC3-210ENST00000560927 Q8N9P0 234 aaPredicted RBP8.42□□□□□ -1.06
CRTC3-210ENST00000560927 A8MUN3 132 aa8.42□□□□□ -1.06
CRTC3-210ENST00000560927 KRTAP1-4P0C5Y4 121 aa8.41□□□□□ -1.06
CRTC3-210ENST00000560927 C8orf87E5RJ46 101 aa8.39□□□□□ -1.07
CRTC3-210ENST00000560927 LOC101927531A0A1B0GV80 90 aa8.37□□□□□ -1.07
CRTC3-210ENST00000560927 LINC00313P59037 77 aa8.37□□□□□ -1.07
CRTC3-210ENST00000560927 Q5VV11 94 aa8.36□□□□□ -1.07
CRTC3-210ENST00000560927 PKHD1P08F94 4074 aa8.35□□□□□ -1.07
CRTC3-210ENST00000560927 HRES1P13985 223 aa8.35□□□□□ -1.07
CRTC3-210ENST00000560927 RETNLBQ9BQ08 111 aa8.34□□□□□ -1.08
CRTC3-210ENST00000560927 LIMD2Q9BT23 127 aa8.33□□□□□ -1.08
CRTC3-210ENST00000560927 PRR15LQ9BU68 103 aa8.32□□□□□ -1.08
CRTC3-210ENST00000560927 PLA2G1BP04054 148 aaKnown RBP8.31□□□□□ -1.08
CRTC3-210ENST00000560927 SACSQ9NZJ4 4579 aa8.31□□□□□ -1.08
CRTC3-210ENST00000560927 KRTAP16-1A8MUX0 517 aa8.3□□□□□ -1.08
CRTC3-210ENST00000560927 SPAG11AQ6PDA7 123 aa8.28□□□□□ -1.08
CRTC3-210ENST00000560927 A8MU10 97 aa8.27□□□□□ -1.09
CRTC3-210ENST00000560927 FAM229AH3BQW9 127 aa8.27□□□□□ -1.09
CRTC3-210ENST00000560927 TYMSOSQ8TAI1 123 aa8.27□□□□□ -1.09
CRTC3-210ENST00000560927 PMAIP1Q13794 54 aa8.27□□□□□ -1.09
CRTC3-210ENST00000560927 CHKB-CPT1BH3BT56 60 aa8.26□□□□□ -1.09
CRTC3-210ENST00000560927 KRTAP21-3Q3LHN1 58 aa8.25□□□□□ -1.09
CRTC3-210ENST00000560927 C4orf48Q5BLP8 95 aa8.24□□□□□ -1.09
CRTC3-210ENST00000560927 DYNC1H1Q14204 4646 aaKnown RBP8.23□□□□□ -1.09
CRTC3-210ENST00000560927 PRR26Q8N8Z3 221 aa8.22□□□□□ -1.09
CRTC3-210ENST00000560927 IGKV2-30P06310 120 aa8.22□□□□□ -1.09
CRTC3-210ENST00000560927 LINC01558Q9Y6Z2 57 aa8.22□□□□□ -1.09
CRTC3-210ENST00000560927 Q75L30 129 aa8.21□□□□□ -1.09
CRTC3-210ENST00000560927 SPINK1P00995 79 aa8.21□□□□□ -1.1
CRTC3-210ENST00000560927 SMR3BP02814 79 aaPredicted RBP8.21□□□□□ -1.1
CRTC3-210ENST00000560927 ACYP2P14621 99 aa8.18□□□□□ -1.1
CRTC3-210ENST00000560927 DMAC1Q96GE9 116 aa8.18□□□□□ -1.1
CRTC3-210ENST00000560927 FAT1Q14517 4588 aa8.16□□□□□ -1.1
CRTC3-210ENST00000560927 A6NED7 52 aa8.15□□□□□ -1.1
CRTC3-210ENST00000560927 LINC00304Q8N9R0 145 aa8.15□□□□□ -1.1
CRTC3-210ENST00000560927 IGKV2D-30A0A075B6S6 120 aa8.15□□□□□ -1.1
CRTC3-210ENST00000560927 LCA10Q71F78 164 aa8.14□□□□□ -1.11
CRTC3-210ENST00000560927 APOBP04114 4563 aaKnown RBP8.12□□□□□ -1.11
CRTC3-210ENST00000560927 A0A1B0GVY2 172 aa8.11□□□□□ -1.11
CRTC3-210ENST00000560927 SPINK7P58062 85 aa8.09□□□□□ -1.11
CRTC3-210ENST00000560927 KRTAP10-4P60372 401 aaPredicted RBP8.08□□□□□ -1.12
CRTC3-210ENST00000560927 RPS29P62273 56 aaKnown RBP8.08□□□□□ -1.12
CRTC3-210ENST00000560927 RYR2Q92736 4967 aa8.05□□□□□ -1.12
CRTC3-210ENST00000560927 PKHD1L1Q86WI1 4243 aa8.05□□□□□ -1.12
CRTC3-210ENST00000560927 SPTSSBQ8NFR3 76 aa8.05□□□□□ -1.12
CRTC3-210ENST00000560927 CDC42SE1Q9NRR8 79 aa8.04□□□□□ -1.12
CRTC3-210ENST00000560927 C7orf65Q6ZTY9 151 aa8.02□□□□□ -1.13
CRTC3-210ENST00000560927 C9orf92A6NGG3 77 aa8.02□□□□□ -1.13
CRTC3-210ENST00000560927 KMT2CQ8NEZ4 4911 aaKnown RBP8.01□□□□□ -1.13
CRTC3-210ENST00000560927 ATP11AUNQ6ZP68 121 aa8□□□□□ -1.13
CRTC3-210ENST00000560927 KTN1-AS1Q86SY8 53 aa7.97□□□□□ -1.13
CRTC3-210ENST00000560927 Q8N1X5 172 aa7.96□□□□□ -1.13
CRTC3-210ENST00000560927 A0A1B0GU69 56 aa7.95□□□□□ -1.14
CRTC3-210ENST00000560927 C20orf166-AS1Q96NR2 134 aa7.93□□□□□ -1.14
CRTC3-210ENST00000560927 A8MUU9 505 aa7.92□□□□□ -1.14
CRTC3-210ENST00000560927 RBM12B-AS1Q9P1G2 102 aa7.92□□□□□ -1.14
CRTC3-210ENST00000560927 A6NN06 94 aa7.9□□□□□ -1.15
CRTC3-210ENST00000560927 LRP1Q07954 4544 aaKnown RBP7.86□□□□□ -1.15
CRTC3-210ENST00000560927 FLG2Q5D862 2391 aaPredicted RBP7.86□□□□□ -1.15
CRTC3-210ENST00000560927 KRTAP3-1Q9BYR8 98 aa7.81□□□□□ -1.16
CRTC3-210ENST00000560927 TNXBP22105 4242 aa7.81□□□□□ -1.16
CRTC3-210ENST00000560927 FAT3Q8TDW7 4589 aa7.81□□□□□ -1.16
CRTC3-210ENST00000560927 HSPG2P98160 4391 aa7.79□□□□□ -1.16
CRTC3-210ENST00000560927 SPATA8Q6RVD6 105 aa7.79□□□□□ -1.16
CRTC3-210ENST00000560927 UQCR11O14957 56 aa7.78□□□□□ -1.16
CRTC3-210ENST00000560927 MIR22HGQ0VDD5 57 aa7.76□□□□□ -1.17
CRTC3-210ENST00000560927 RYR3Q15413 4870 aa7.76□□□□□ -1.17
CRTC3-210ENST00000560927 Q5VSD8 79 aa7.75□□□□□ -1.17
CRTC3-210ENST00000560927 KRTAP10-8P60410 259 aa7.74□□□□□ -1.17
CRTC3-210ENST00000560927 KRTAP17-1Q9BYP8 105 aa7.71□□□□□ -1.18
CRTC3-210ENST00000560927 RYR1P21817 5038 aa7.69□□□□□ -1.18
CRTC3-210ENST00000560927 DMBT1Q9UGM3 2413 aaPredicted RBP7.66□□□□□ -1.18
CRTC3-210ENST00000560927 MYCBP2O75592 4640 aa7.66□□□□□ -1.18
CRTC3-210ENST00000560927 COX6B2Q6YFQ2 88 aa7.65□□□□□ -1.18
CRTC3-210ENST00000560927 KIAA1109Q2LD37 5005 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms