RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 BPY2O14599 106 aa6.46□□□□□ -1.38
SNX1-212ENST00000560861 SPINK1P00995 79 aa6.46□□□□□ -1.38
SNX1-212ENST00000560861 MT1HL1P0DM35 61 aa6.46□□□□□ -1.38
SNX1-212ENST00000560861 IMUPQ9GZP8 106 aa6.45□□□□□ -1.38
SNX1-212ENST00000560861 DEFB116Q30KQ4 102 aa6.44□□□□□ -1.38
SNX1-212ENST00000560861 LIMD2Q9BT23 127 aa6.43□□□□□ -1.38
SNX1-212ENST00000560861 DMBT1Q9UGM3 2413 aaPredicted RBP6.42□□□□□ -1.38
SNX1-212ENST00000560861 J3KT08 172 aa6.42□□□□□ -1.38
SNX1-212ENST00000560861 IGKV4-1P06312 121 aa6.42□□□□□ -1.38
SNX1-212ENST00000560861 C1orf195Q5TG92 126 aa6.42□□□□□ -1.38
SNX1-212ENST00000560861 Q8N9L7 120 aa6.42□□□□□ -1.38
SNX1-212ENST00000560861 OXTP01178 125 aa6.41□□□□□ -1.38
SNX1-212ENST00000560861 A8MWP4 228 aa6.4□□□□□ -1.38
SNX1-212ENST00000560861 K7EQZ3 153 aa6.4□□□□□ -1.38
SNX1-212ENST00000560861 A0A087WVE0 104 aa6.39□□□□□ -1.39
SNX1-212ENST00000560861 KRTAP29-1A8MX34 341 aaPredicted RBP6.38□□□□□ -1.39
SNX1-212ENST00000560861 HIST1H4AP62805 103 aaKnown RBP6.38□□□□□ -1.39
SNX1-212ENST00000560861 PRR15Q8IV56 129 aa6.38□□□□□ -1.39
SNX1-212ENST00000560861 KRTAP4-12Q9BQ66 201 aa6.37□□□□□ -1.39
SNX1-212ENST00000560861 HMCN2Q8NDA2 5059 aa6.37□□□□□ -1.39
SNX1-212ENST00000560861 A0A1B0GVX0 72 aa6.35□□□□□ -1.39
SNX1-212ENST00000560861 SCGB1A1P11684 91 aa6.35□□□□□ -1.39
SNX1-212ENST00000560861 LCE3BQ5TA77 95 aa6.34□□□□□ -1.39
SNX1-212ENST00000560861 MMP24-AS1A0A0U1RRL7 71 aa6.33□□□□□ -1.4
SNX1-212ENST00000560861 FAM236AA0A1B0GUQ0 79 aa6.32□□□□□ -1.4
SNX1-212ENST00000560861 FAM236BA0A1B0GV22 79 aa6.32□□□□□ -1.4
SNX1-212ENST00000560861 NDUFB1O75438 58 aa6.32□□□□□ -1.4
SNX1-212ENST00000560861 NOTCH2NLQ7Z3S9 236 aa6.31□□□□□ -1.4
SNX1-212ENST00000560861 C8orf17Q9NRJ1 99 aa6.31□□□□□ -1.4
SNX1-212ENST00000560861 HCG22E2RYF7 251 aa6.3□□□□□ -1.4
SNX1-212ENST00000560861 IGHV6-1A0A0B4J1U7 121 aa6.29□□□□□ -1.4
SNX1-212ENST00000560861 RETNLBQ9BQ08 111 aa6.29□□□□□ -1.4
SNX1-212ENST00000560861 UBR4Q5T4S7 5183 aa6.28□□□□□ -1.4
SNX1-212ENST00000560861 C8orf87E5RJ46 101 aa6.28□□□□□ -1.4
SNX1-212ENST00000560861 KRTAP16-1A8MUX0 517 aa6.27□□□□□ -1.41
SNX1-212ENST00000560861 CASC2Q6XLA1 102 aa6.26□□□□□ -1.41
SNX1-212ENST00000560861 WFDC13Q8IUB5 93 aa6.26□□□□□ -1.41
SNX1-212ENST00000560861 KRTAP19-1Q8IUB9 90 aa6.26□□□□□ -1.41
SNX1-212ENST00000560861 FP248Q71RG6 208 aaPredicted RBP6.25□□□□□ -1.41
SNX1-212ENST00000560861 TMEM254Q8TBM7 123 aa6.25□□□□□ -1.41
SNX1-212ENST00000560861 hDV103S1A0JD37 113 aa6.24□□□□□ -1.41
SNX1-212ENST00000560861 ATOX1O00244 68 aa6.24□□□□□ -1.41
SNX1-212ENST00000560861 LINC00313P59037 77 aa6.23□□□□□ -1.41
SNX1-212ENST00000560861 OCR1Q9BZK8 76 aa6.23□□□□□ -1.41
SNX1-212ENST00000560861 MRPL34Q9BQ48 92 aaKnown RBP6.21□□□□□ -1.42
SNX1-212ENST00000560861 Q8N9P0 234 aaPredicted RBP6.19□□□□□ -1.42
SNX1-212ENST00000560861 IGLV7-46A0A075B6I9 117 aa6.18□□□□□ -1.42
SNX1-212ENST00000560861 TRAV7A0A075B6U4 112 aa6.18□□□□□ -1.42
SNX1-212ENST00000560861 KRTAP13-3Q3SY46 172 aa6.18□□□□□ -1.42
SNX1-212ENST00000560861 SMIM20Q8N5G0 67 aa6.18□□□□□ -1.42
SNX1-212ENST00000560861 KRTAP9-9Q9BYP9 154 aa6.18□□□□□ -1.42
SNX1-212ENST00000560861 KRTAP9-4Q9BYQ2 154 aa6.18□□□□□ -1.42
SNX1-212ENST00000560861 SERP2Q8N6R1 65 aa6.17□□□□□ -1.42
SNX1-212ENST00000560861 ANAPC13Q9BS18 74 aa6.17□□□□□ -1.42
SNX1-212ENST00000560861 C9orf92A6NGG3 77 aa6.15□□□□□ -1.42
SNX1-212ENST00000560861 LRP2P98164 4655 aa6.14□□□□□ -1.43
SNX1-212ENST00000560861 A8MUU9 505 aa6.14□□□□□ -1.43
SNX1-212ENST00000560861 C20orf166-AS1Q96NR2 134 aa6.14□□□□□ -1.43
SNX1-212ENST00000560861 UQCRQO14949 82 aa6.13□□□□□ -1.43
SNX1-212ENST00000560861 COX7CP15954 63 aa6.13□□□□□ -1.43
SNX1-212ENST00000560861 TP53AIP1Q9HCN2 124 aa6.13□□□□□ -1.43
SNX1-212ENST00000560861 PCP4P48539 62 aa6.12□□□□□ -1.43
SNX1-212ENST00000560861 PRR4Q16378 134 aa6.12□□□□□ -1.43
SNX1-212ENST00000560861 TPRXLQ17RH7 258 aa6.11□□□□□ -1.43
SNX1-212ENST00000560861 Q5W150 140 aa6.1□□□□□ -1.43
SNX1-212ENST00000560861 KRTAP4-8A0A0G2JLE6 195 aa6.09□□□□□ -1.43
SNX1-212ENST00000560861 CCDC179H3BU77 68 aa6.09□□□□□ -1.43
SNX1-212ENST00000560861 NDUFS5O43920 106 aa6.09□□□□□ -1.43
SNX1-212ENST00000560861 RNF213Q63HN8 5207 aa6.08□□□□□ -1.44
SNX1-212ENST00000560861 C5orf47Q569G3 176 aa6.08□□□□□ -1.44
SNX1-212ENST00000560861 Q75L30 129 aa6.08□□□□□ -1.44
SNX1-212ENST00000560861 A0A0U1RQV1 116 aa6.07□□□□□ -1.44
SNX1-212ENST00000560861 ZCCHC13Q8WW36 166 aaKnown RBP6.07□□□□□ -1.44
SNX1-212ENST00000560861 TRAV22A0A0B4J277 110 aa6.06□□□□□ -1.44
SNX1-212ENST00000560861 H0Y9P7 68 aa6.05□□□□□ -1.44
SNX1-212ENST00000560861 RPL37P61927 97 aaKnown RBP6.05□□□□□ -1.44
SNX1-212ENST00000560861 KLKP1Q107X0 134 aa6.04□□□□□ -1.44
SNX1-212ENST00000560861 C20orf197Q8N268 126 aa6.04□□□□□ -1.44
SNX1-212ENST00000560861 H3BPC8 53 aa6.03□□□□□ -1.44
SNX1-212ENST00000560861 CYSTM1Q9H1C7 97 aa6.03□□□□□ -1.44
SNX1-212ENST00000560861 LPAP08519 4548 aa6.03□□□□□ -1.44
SNX1-212ENST00000560861 MP68P56378 58 aa6.01□□□□□ -1.45
SNX1-212ENST00000560861 LINC00208Q96KT6 92 aa6□□□□□ -1.45
SNX1-212ENST00000560861 SNURFQ9Y675 71 aa6□□□□□ -1.45
SNX1-212ENST00000560861 C1orf64Q8NEQ6 169 aa5.99□□□□□ -1.45
SNX1-212ENST00000560861 IGKV2-30P06310 120 aa5.98□□□□□ -1.45
SNX1-212ENST00000560861 LOC101927531A0A1B0GV80 90 aa5.97□□□□□ -1.45
SNX1-212ENST00000560861 MUC17Q685J3 4493 aa5.96□□□□□ -1.45
SNX1-212ENST00000560861 CYP4F30PQ9H0H9 118 aa5.95□□□□□ -1.46
SNX1-212ENST00000560861 H7BZZ5 65 aa5.94□□□□□ -1.46
SNX1-212ENST00000560861 LCE1DQ5T752 114 aa5.93□□□□□ -1.46
SNX1-212ENST00000560861 ATP11AUNQ6ZP68 121 aa5.93□□□□□ -1.46
SNX1-212ENST00000560861 NDUFC1O43677 76 aa5.92□□□□□ -1.46
SNX1-212ENST00000560861 PCOTHQ58A44 107 aa5.91□□□□□ -1.46
SNX1-212ENST00000560861 IGKV2D-30A0A075B6S6 120 aa5.9□□□□□ -1.46
SNX1-212ENST00000560861 C7orf65Q6ZTY9 151 aa5.9□□□□□ -1.46
SNX1-212ENST00000560861 SPINK7P58062 85 aa5.88□□□□□ -1.47
SNX1-212ENST00000560861 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
SNX1-212ENST00000560861 SEC61BP60468 96 aaKnown RBP5.86□□□□□ -1.47
SNX1-212ENST00000560861 HRES1P13985 223 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms