RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 C9orf163Q8N9P6 203 aa5.37□□□□□ -1.55
CCDC33-209ENST00000560565 A8MUN3 132 aa5.36□□□□□ -1.55
CCDC33-209ENST00000560565 PRR15LQ9BU68 103 aa5.36□□□□□ -1.55
CCDC33-209ENST00000560565 CDC42SE1Q9NRR8 79 aa5.36□□□□□ -1.55
CCDC33-209ENST00000560565 A6NED7 52 aa5.35□□□□□ -1.55
CCDC33-209ENST00000560565 LRCOL1A6NCL2 159 aa5.34□□□□□ -1.55
CCDC33-209ENST00000560565 CDK2AP2O75956 126 aa5.34□□□□□ -1.55
CCDC33-209ENST00000560565 PHF5AQ7RTV0 110 aaKnown RBP5.34□□□□□ -1.55
CCDC33-209ENST00000560565 KRTAP1-5Q9BYS1 174 aa5.34□□□□□ -1.55
CCDC33-209ENST00000560565 ZNF706Q9Y5V0 76 aaPredicted RBP5.34□□□□□ -1.55
CCDC33-209ENST00000560565 A0A1B0GVY2 172 aa5.33□□□□□ -1.56
CCDC33-209ENST00000560565 COA5Q86WW8 74 aa5.33□□□□□ -1.56
CCDC33-209ENST00000560565 LINC00472Q9H8W2 130 aa5.33□□□□□ -1.56
CCDC33-209ENST00000560565 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
CCDC33-209ENST00000560565 FAM168BA1KXE4 195 aa5.32□□□□□ -1.56
CCDC33-209ENST00000560565 PRR4Q16378 134 aa5.32□□□□□ -1.56
CCDC33-209ENST00000560565 HSPG2P98160 4391 aa5.31□□□□□ -1.56
CCDC33-209ENST00000560565 C4orf48Q5BLP8 95 aa5.31□□□□□ -1.56
CCDC33-209ENST00000560565 A0A087X002 238 aa5.3□□□□□ -1.56
CCDC33-209ENST00000560565 ASB16-AS1Q495Z4 193 aa5.3□□□□□ -1.56
CCDC33-209ENST00000560565 Q6ZRN7 208 aaPredicted RBP5.3□□□□□ -1.56
CCDC33-209ENST00000560565 DMBT1Q9UGM3 2413 aaPredicted RBP5.3□□□□□ -1.56
CCDC33-209ENST00000560565 MMP24-AS1A0A0U1RRL7 71 aa5.29□□□□□ -1.56
CCDC33-209ENST00000560565 MUC2Q02817 5179 aa5.29□□□□□ -1.56
CCDC33-209ENST00000560565 LRP1BQ9NZR2 4599 aa5.28□□□□□ -1.56
CCDC33-209ENST00000560565 C7orf65Q6ZTY9 151 aa5.28□□□□□ -1.56
CCDC33-209ENST00000560565 SPTSSBQ8NFR3 76 aa5.28□□□□□ -1.56
CCDC33-209ENST00000560565 DNAH5Q8TE73 4624 aa5.28□□□□□ -1.56
CCDC33-209ENST00000560565 PRLHP81277 87 aa5.27□□□□□ -1.57
CCDC33-209ENST00000560565 KRTAP7-1Q8IUC3 87 aa5.27□□□□□ -1.57
CCDC33-209ENST00000560565 A0A096LNI7 61 aa5.25□□□□□ -1.57
CCDC33-209ENST00000560565 J3QL48 77 aa5.25□□□□□ -1.57
CCDC33-209ENST00000560565 DEFB116Q30KQ4 102 aa5.25□□□□□ -1.57
CCDC33-209ENST00000560565 C8orf17Q9NRJ1 99 aa5.25□□□□□ -1.57
CCDC33-209ENST00000560565 A0A087WTM6 91 aa5.24□□□□□ -1.57
CCDC33-209ENST00000560565 MRPL34Q9BQ48 92 aaKnown RBP5.24□□□□□ -1.57
CCDC33-209ENST00000560565 PLAC8Q9NZF1 115 aa5.24□□□□□ -1.57
CCDC33-209ENST00000560565 APOBP04114 4563 aaKnown RBP5.23□□□□□ -1.57
CCDC33-209ENST00000560565 IGKV2-24A0A0C4DH68 120 aa5.23□□□□□ -1.57
CCDC33-209ENST00000560565 A0A1B0GVX0 72 aa5.23□□□□□ -1.57
CCDC33-209ENST00000560565 A6NN06 94 aa5.23□□□□□ -1.57
CCDC33-209ENST00000560565 ACYP2P14621 99 aa5.23□□□□□ -1.57
CCDC33-209ENST00000560565 RNF213Q63HN8 5207 aa5.22□□□□□ -1.57
CCDC33-209ENST00000560565 C8orf87E5RJ46 101 aa5.22□□□□□ -1.57
CCDC33-209ENST00000560565 KRTAP10-2P60368 255 aa5.22□□□□□ -1.57
CCDC33-209ENST00000560565 LINC00483Q53H64 154 aa5.22□□□□□ -1.57
CCDC33-209ENST00000560565 HMCN2Q8NDA2 5059 aa5.22□□□□□ -1.57
CCDC33-209ENST00000560565 A0A1W2PNN7 141 aa5.21□□□□□ -1.58
CCDC33-209ENST00000560565 LCA10Q71F78 164 aa5.21□□□□□ -1.58
CCDC33-209ENST00000560565 RBM12B-AS1Q9P1G2 102 aa5.2□□□□□ -1.58
CCDC33-209ENST00000560565 PCOTHQ58A44 107 aa5.18□□□□□ -1.58
CCDC33-209ENST00000560565 SPAG11AQ6PDA7 123 aa5.18□□□□□ -1.58
CCDC33-209ENST00000560565 KRTAP13-1Q8IUC0 172 aa5.17□□□□□ -1.58
CCDC33-209ENST00000560565 DNAH8Q96JB1 4490 aa5.15□□□□□ -1.58
CCDC33-209ENST00000560565 MYCBP2O75592 4640 aa5.15□□□□□ -1.58
CCDC33-209ENST00000560565 SRRM2Q9UQ35 2752 aaKnown RBP5.15□□□□□ -1.58
CCDC33-209ENST00000560565 FAT1Q14517 4588 aa5.15□□□□□ -1.58
CCDC33-209ENST00000560565 IGLV5-52A0A0A0MRZ9 124 aa5.15□□□□□ -1.59
CCDC33-209ENST00000560565 IGHV6-1A0A0B4J1U7 121 aa5.15□□□□□ -1.59
CCDC33-209ENST00000560565 HRES1P13985 223 aa5.15□□□□□ -1.59
CCDC33-209ENST00000560565 FAM229AH3BQW9 127 aa5.14□□□□□ -1.59
CCDC33-209ENST00000560565 KRTAP10-1P60331 282 aa5.14□□□□□ -1.59
CCDC33-209ENST00000560565 SPACA4Q8TDM5 124 aa5.14□□□□□ -1.59
CCDC33-209ENST00000560565 Q96NJ1 140 aa5.14□□□□□ -1.59
CCDC33-209ENST00000560565 A0A0G2JQZ4 141 aa5.13□□□□□ -1.59
CCDC33-209ENST00000560565 IGLV9-49A0A0B4J1Y8 123 aa5.12□□□□□ -1.59
CCDC33-209ENST00000560565 Q8N1X5 172 aa5.12□□□□□ -1.59
CCDC33-209ENST00000560565 A0A1B0GU69 56 aa5.11□□□□□ -1.59
CCDC33-209ENST00000560565 DMAC1Q96GE9 116 aa5.11□□□□□ -1.59
CCDC33-209ENST00000560565 FAT4Q6V0I7 4981 aa5.11□□□□□ -1.59
CCDC33-209ENST00000560565 CHTF8P0CG12 524 aa5.1□□□□□ -1.59
CCDC33-209ENST00000560565 SSBP3-AS1Q7Z2R9 100 aa5.1□□□□□ -1.59
CCDC33-209ENST00000560565 VPS13BQ7Z7G8 4022 aa5.09□□□□□ -1.59
CCDC33-209ENST00000560565 UQCR11O14957 56 aa5.09□□□□□ -1.59
CCDC33-209ENST00000560565 ZNF861PO60384 105 aa5.09□□□□□ -1.59
CCDC33-209ENST00000560565 PLA2G1BP04054 148 aaKnown RBP5.09□□□□□ -1.59
CCDC33-209ENST00000560565 PRR26Q8N8Z3 221 aa5.09□□□□□ -1.59
CCDC33-209ENST00000560565 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.09□□□□□ -1.59
CCDC33-209ENST00000560565 SMR3BP02814 79 aaPredicted RBP5.07□□□□□ -1.6
CCDC33-209ENST00000560565 SPINK7P58062 85 aa5.07□□□□□ -1.6
CCDC33-209ENST00000560565 SPATA8Q6RVD6 105 aa5.07□□□□□ -1.6
CCDC33-209ENST00000560565 Q6ZSA8 131 aa5.07□□□□□ -1.6
CCDC33-209ENST00000560565 PANO1I0J062 215 aa5.06□□□□□ -1.6
CCDC33-209ENST00000560565 FLG2Q5D862 2391 aaPredicted RBP5.06□□□□□ -1.6
CCDC33-209ENST00000560565 Q5VSD8 79 aa5.05□□□□□ -1.6
CCDC33-209ENST00000560565 RETNLBQ9BQ08 111 aa5.05□□□□□ -1.6
CCDC33-209ENST00000560565 A8MU10 97 aa5.04□□□□□ -1.6
CCDC33-209ENST00000560565 LINC00313P59037 77 aa5.03□□□□□ -1.6
CCDC33-209ENST00000560565 MIR22HGQ0VDD5 57 aa5.03□□□□□ -1.6
CCDC33-209ENST00000560565 KRTAP13-3Q3SY46 172 aa5.03□□□□□ -1.6
CCDC33-209ENST00000560565 KRTAP11-1Q8IUC1 163 aa5.02□□□□□ -1.61
CCDC33-209ENST00000560565 CRCT1Q9UGL9 99 aa5.02□□□□□ -1.61
CCDC33-209ENST00000560565 IGKV2-30P06310 120 aa5.01□□□□□ -1.61
CCDC33-209ENST00000560565 CIRBP-AS1Q8TBR5 109 aa5.01□□□□□ -1.61
CCDC33-209ENST00000560565 LINC01554Q52M75 96 aa5□□□□□ -1.61
CCDC33-209ENST00000560565 PSORS1C2Q9UIG4 136 aa5□□□□□ -1.61
CCDC33-209ENST00000560565 Q5W150 140 aa4.99□□□□□ -1.61
CCDC33-209ENST00000560565 FSIP2Q5CZC0 6907 aa4.98□□□□□ -1.61
CCDC33-209ENST00000560565 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
CCDC33-209ENST00000560565 IGLV7-43P04211 117 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms