RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 TEN1Q86WV5 123 aa4.44□□□□□ -1.7
LRRC28-219ENST00000560483 A0A087WSZ3 146 aa4.43□□□□□ -1.7
LRRC28-219ENST00000560483 TRACP01848 142 aa4.43□□□□□ -1.7
LRRC28-219ENST00000560483 SEC61BP60468 96 aaKnown RBP4.43□□□□□ -1.7
LRRC28-219ENST00000560483 Q5XG85 94 aa4.43□□□□□ -1.7
LRRC28-219ENST00000560483 BAALC-AS2P0C853 105 aa4.42□□□□□ -1.7
LRRC28-219ENST00000560483 DSCR8Q96T75 97 aa4.42□□□□□ -1.7
LRRC28-219ENST00000560483 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
LRRC28-219ENST00000560483 CCKP06307 115 aa4.41□□□□□ -1.7
LRRC28-219ENST00000560483 RBM3P98179 157 aaKnown RBP4.41□□□□□ -1.7
LRRC28-219ENST00000560483 UBE2V1Q13404 147 aa4.4□□□□□ -1.71
LRRC28-219ENST00000560483 SIGMAR1Q99720 223 aa4.4□□□□□ -1.71
LRRC28-219ENST00000560483 Q6Q795 121 aa4.39□□□□□ -1.71
LRRC28-219ENST00000560483 C9JAW5 83 aa4.38□□□□□ -1.71
LRRC28-219ENST00000560483 ASB16-AS1Q495Z4 193 aa4.38□□□□□ -1.71
LRRC28-219ENST00000560483 MUC17Q685J3 4493 aa4.38□□□□□ -1.71
LRRC28-219ENST00000560483 TRBV20-1A0A075B6N2 111 aa4.37□□□□□ -1.71
LRRC28-219ENST00000560483 A0A1W2PNM2 257 aa4.37□□□□□ -1.71
LRRC28-219ENST00000560483 PCOTHQ58A44 107 aa4.37□□□□□ -1.71
LRRC28-219ENST00000560483 OBSCN-AS1Q96MR7 158 aa4.37□□□□□ -1.71
LRRC28-219ENST00000560483 MUC2Q02817 5179 aa4.36□□□□□ -1.71
LRRC28-219ENST00000560483 TRBV7-4A0A0J9YYF1 115 aa4.36□□□□□ -1.71
LRRC28-219ENST00000560483 IGKV4-1P06312 121 aa4.36□□□□□ -1.71
LRRC28-219ENST00000560483 JMJD7-PLA2G4BH0Y9G9 81 aa4.35□□□□□ -1.71
LRRC28-219ENST00000560483 DEFB116Q30KQ4 102 aa4.35□□□□□ -1.71
LRRC28-219ENST00000560483 Q96NJ1 140 aa4.35□□□□□ -1.71
LRRC28-219ENST00000560483 A0A1W2PPM0 123 aa4.34□□□□□ -1.71
LRRC28-219ENST00000560483 TAX1BP3O14907 124 aa4.34□□□□□ -1.71
LRRC28-219ENST00000560483 MTURNQ8N3F0 131 aa4.34□□□□□ -1.71
LRRC28-219ENST00000560483 ATP11AUNQ6ZP68 121 aa4.33□□□□□ -1.72
LRRC28-219ENST00000560483 C14orf132Q9NPU4 83 aa4.33□□□□□ -1.72
LRRC28-219ENST00000560483 SPCS1Q9Y6A9 102 aa4.33□□□□□ -1.72
LRRC28-219ENST00000560483 IGHV6-1A0A0B4J1U7 121 aa4.32□□□□□ -1.72
LRRC28-219ENST00000560483 DSCR10P59022 87 aa4.32□□□□□ -1.72
LRRC28-219ENST00000560483 RPL37P61927 97 aaKnown RBP4.32□□□□□ -1.72
LRRC28-219ENST00000560483 COL5A1-AS1Q5SY13 56 aa4.32□□□□□ -1.72
LRRC28-219ENST00000560483 Q8N9P0 234 aaPredicted RBP4.32□□□□□ -1.72
LRRC28-219ENST00000560483 PDE6GP18545 87 aa4.3□□□□□ -1.72
LRRC28-219ENST00000560483 LINC00313P59037 77 aa4.3□□□□□ -1.72
LRRC28-219ENST00000560483 FAT4Q6V0I7 4981 aa4.3□□□□□ -1.72
LRRC28-219ENST00000560483 H3BT86 120 aa4.29□□□□□ -1.72
LRRC28-219ENST00000560483 Q6ZQT0 140 aa4.29□□□□□ -1.72
LRRC28-219ENST00000560483 LOC110117498A0A087WWA1 95 aa4.28□□□□□ -1.72
LRRC28-219ENST00000560483 NDUFB1O75438 58 aa4.28□□□□□ -1.72
LRRC28-219ENST00000560483 J3KT08 172 aa4.27□□□□□ -1.73
LRRC28-219ENST00000560483 NREPQ16612 68 aa4.27□□□□□ -1.73
LRRC28-219ENST00000560483 COX6B2Q6YFQ2 88 aa4.27□□□□□ -1.73
LRRC28-219ENST00000560483 Q75L30 129 aa4.27□□□□□ -1.73
LRRC28-219ENST00000560483 KRTAP4-1Q9BYQ7 146 aa4.27□□□□□ -1.73
LRRC28-219ENST00000560483 LINC00472Q9H8W2 130 aa4.27□□□□□ -1.73
LRRC28-219ENST00000560483 A0A1B0GVX0 72 aa4.25□□□□□ -1.73
LRRC28-219ENST00000560483 GTF2H5Q6ZYL4 71 aa4.25□□□□□ -1.73
LRRC28-219ENST00000560483 A0A1B0GW54 56 aa4.24□□□□□ -1.73
LRRC28-219ENST00000560483 C8orf87E5RJ46 101 aa4.24□□□□□ -1.73
LRRC28-219ENST00000560483 K7EP34 96 aa4.24□□□□□ -1.73
LRRC28-219ENST00000560483 A8MUU9 505 aa4.22□□□□□ -1.73
LRRC28-219ENST00000560483 C5orf47Q569G3 176 aa4.22□□□□□ -1.73
LRRC28-219ENST00000560483 NOTCH2NLQ7Z3S9 236 aa4.22□□□□□ -1.73
LRRC28-219ENST00000560483 C20orf166-AS1Q96NR2 134 aa4.22□□□□□ -1.73
LRRC28-219ENST00000560483 A8MWP4 228 aa4.21□□□□□ -1.74
LRRC28-219ENST00000560483 BPY2O14599 106 aa4.2□□□□□ -1.74
LRRC28-219ENST00000560483 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
LRRC28-219ENST00000560483 M0R2T5 61 aa4.19□□□□□ -1.74
LRRC28-219ENST00000560483 NDUFS5O43920 106 aa4.19□□□□□ -1.74
LRRC28-219ENST00000560483 C8orf17Q9NRJ1 99 aa4.19□□□□□ -1.74
LRRC28-219ENST00000560483 FAM236DA0A1B0GTK5 79 aa4.18□□□□□ -1.74
LRRC28-219ENST00000560483 KRTAP16-1A8MUX0 517 aa4.18□□□□□ -1.74
LRRC28-219ENST00000560483 FAM236CP0DP71 79 aa4.18□□□□□ -1.74
LRRC28-219ENST00000560483 UBL5Q9BZL1 73 aa4.18□□□□□ -1.74
LRRC28-219ENST00000560483 IGKV3D-7A0A0C4DH55 119 aa4.17□□□□□ -1.74
LRRC28-219ENST00000560483 Q6ZVQ6 151 aa4.17□□□□□ -1.74
LRRC28-219ENST00000560483 PRR15Q8IV56 129 aa4.17□□□□□ -1.74
LRRC28-219ENST00000560483 F8W1H4 67 aa4.16□□□□□ -1.74
LRRC28-219ENST00000560483 PRO0461Q9UI25 63 aa4.16□□□□□ -1.74
LRRC28-219ENST00000560483 K7EQZ3 153 aa4.15□□□□□ -1.75
LRRC28-219ENST00000560483 ETDBQ3ZM63 59 aa4.15□□□□□ -1.75
LRRC28-219ENST00000560483 hDV103S1A0JD37 113 aa4.14□□□□□ -1.75
LRRC28-219ENST00000560483 WFDC13Q8IUB5 93 aa4.14□□□□□ -1.75
LRRC28-219ENST00000560483 ZCCHC13Q8WW36 166 aaKnown RBP4.14□□□□□ -1.75
LRRC28-219ENST00000560483 RBM12B-AS1Q9P1G2 102 aa4.14□□□□□ -1.75
LRRC28-219ENST00000560483 V9GYY9 64 aa4.14□□□□□ -1.75
LRRC28-219ENST00000560483 Q8N9L7 120 aa4.13□□□□□ -1.75
LRRC28-219ENST00000560483 TMEM254Q8TBM7 123 aa4.13□□□□□ -1.75
LRRC28-219ENST00000560483 MRPL34Q9BQ48 92 aaKnown RBP4.13□□□□□ -1.75
LRRC28-219ENST00000560483 LINC00846Q9NV44 126 aa4.12□□□□□ -1.75
LRRC28-219ENST00000560483 MMP24-AS1A0A0U1RRL7 71 aa4.11□□□□□ -1.75
LRRC28-219ENST00000560483 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
LRRC28-219ENST00000560483 CASC2Q6XLA1 102 aa4.11□□□□□ -1.75
LRRC28-219ENST00000560483 MT1HP80294 61 aa4.1□□□□□ -1.75
LRRC28-219ENST00000560483 SPINK7P58062 85 aa4.09□□□□□ -1.75
LRRC28-219ENST00000560483 KRTAP19-2Q3LHN2 52 aa4.09□□□□□ -1.75
LRRC28-219ENST00000560483 HCG22E2RYF7 251 aa4.08□□□□□ -1.76
LRRC28-219ENST00000560483 IGKV2D-30A0A075B6S6 120 aa4.07□□□□□ -1.76
LRRC28-219ENST00000560483 IGKV2-30P06310 120 aa4.07□□□□□ -1.76
LRRC28-219ENST00000560483 A0A1B0GV90 55 aa4.06□□□□□ -1.76
LRRC28-219ENST00000560483 FLGP20930 4061 aaPredicted RBP4.05□□□□□ -1.76
LRRC28-219ENST00000560483 ACYP1P07311 99 aa4.04□□□□□ -1.76
LRRC28-219ENST00000560483 HRES1P13985 223 aa4.04□□□□□ -1.76
LRRC28-219ENST00000560483 CXCL6P80162 114 aa4.04□□□□□ -1.76
LRRC28-219ENST00000560483 HIST1H4AP62805 103 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms