RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 A8MWP4 228 aa4.91□□□□□ -1.62
TRAF3-209ENST00000560463 KRTAP29-1A8MX34 341 aaPredicted RBP4.91□□□□□ -1.62
TRAF3-209ENST00000560463 HERC2O95714 4834 aa4.91□□□□□ -1.62
TRAF3-209ENST00000560463 MT1HL1P0DM35 61 aa4.9□□□□□ -1.63
TRAF3-209ENST00000560463 PRR15Q8IV56 129 aa4.9□□□□□ -1.63
TRAF3-209ENST00000560463 K7EQZ3 153 aa4.89□□□□□ -1.63
TRAF3-209ENST00000560463 A0A1B0GVX0 72 aa4.88□□□□□ -1.63
TRAF3-209ENST00000560463 SCGB1A1P11684 91 aa4.88□□□□□ -1.63
TRAF3-209ENST00000560463 Q8N9L7 120 aa4.88□□□□□ -1.63
TRAF3-209ENST00000560463 A0A087WVE0 104 aa4.87□□□□□ -1.63
TRAF3-209ENST00000560463 LORP23490 312 aaPredicted RBP4.87□□□□□ -1.63
TRAF3-209ENST00000560463 HCG22E2RYF7 251 aa4.85□□□□□ -1.63
TRAF3-209ENST00000560463 C8orf87E5RJ46 101 aa4.85□□□□□ -1.63
TRAF3-209ENST00000560463 ABCA13Q86UQ4 5058 aa4.85□□□□□ -1.63
TRAF3-209ENST00000560463 IGHV6-1A0A0B4J1U7 121 aa4.84□□□□□ -1.63
TRAF3-209ENST00000560463 FAM236AA0A1B0GUQ0 79 aa4.84□□□□□ -1.63
TRAF3-209ENST00000560463 FAM236BA0A1B0GV22 79 aa4.84□□□□□ -1.63
TRAF3-209ENST00000560463 FP248Q71RG6 208 aaPredicted RBP4.84□□□□□ -1.63
TRAF3-209ENST00000560463 C8orf17Q9NRJ1 99 aa4.84□□□□□ -1.63
TRAF3-209ENST00000560463 MMP24-AS1A0A0U1RRL7 71 aa4.83□□□□□ -1.64
TRAF3-209ENST00000560463 LINC00313P59037 77 aa4.83□□□□□ -1.64
TRAF3-209ENST00000560463 hDV103S1A0JD37 113 aa4.82□□□□□ -1.64
TRAF3-209ENST00000560463 ATOX1O00244 68 aa4.82□□□□□ -1.64
TRAF3-209ENST00000560463 CASC2Q6XLA1 102 aa4.82□□□□□ -1.64
TRAF3-209ENST00000560463 SMIM20Q8N5G0 67 aa4.81□□□□□ -1.64
TRAF3-209ENST00000560463 TMEM254Q8TBM7 123 aa4.81□□□□□ -1.64
TRAF3-209ENST00000560463 RETNLBQ9BQ08 111 aa4.81□□□□□ -1.64
TRAF3-209ENST00000560463 WFDC13Q8IUB5 93 aa4.8□□□□□ -1.64
TRAF3-209ENST00000560463 MRPL34Q9BQ48 92 aaKnown RBP4.79□□□□□ -1.64
TRAF3-209ENST00000560463 NOTCH2NLQ7Z3S9 236 aa4.78□□□□□ -1.64
TRAF3-209ENST00000560463 IGLV7-46A0A075B6I9 117 aa4.76□□□□□ -1.65
TRAF3-209ENST00000560463 TRAV7A0A075B6U4 112 aa4.76□□□□□ -1.65
TRAF3-209ENST00000560463 TP53AIP1Q9HCN2 124 aa4.76□□□□□ -1.65
TRAF3-209ENST00000560463 KRTAP16-1A8MUX0 517 aa4.75□□□□□ -1.65
TRAF3-209ENST00000560463 Q8N9P0 234 aaPredicted RBP4.75□□□□□ -1.65
TRAF3-209ENST00000560463 ANAPC13Q9BS18 74 aa4.75□□□□□ -1.65
TRAF3-209ENST00000560463 OCR1Q9BZK8 76 aa4.75□□□□□ -1.65
TRAF3-209ENST00000560463 SERP2Q8N6R1 65 aa4.74□□□□□ -1.65
TRAF3-209ENST00000560463 C9orf92A6NGG3 77 aa4.73□□□□□ -1.65
TRAF3-209ENST00000560463 NDUFS5O43920 106 aa4.73□□□□□ -1.65
TRAF3-209ENST00000560463 PRR4Q16378 134 aa4.73□□□□□ -1.65
TRAF3-209ENST00000560463 UQCRQO14949 82 aa4.72□□□□□ -1.65
TRAF3-209ENST00000560463 COX7CP15954 63 aa4.72□□□□□ -1.65
TRAF3-209ENST00000560463 KRTAP13-3Q3SY46 172 aa4.72□□□□□ -1.65
TRAF3-209ENST00000560463 TPRXLQ17RH7 258 aa4.71□□□□□ -1.66
TRAF3-209ENST00000560463 C5orf47Q569G3 176 aa4.71□□□□□ -1.66
TRAF3-209ENST00000560463 C20orf166-AS1Q96NR2 134 aa4.71□□□□□ -1.66
TRAF3-209ENST00000560463 PCLOQ9Y6V0 5065 aa4.7□□□□□ -1.66
TRAF3-209ENST00000560463 A8MUU9 505 aa4.7□□□□□ -1.66
TRAF3-209ENST00000560463 TRAV22A0A0B4J277 110 aa4.69□□□□□ -1.66
TRAF3-209ENST00000560463 PCP4P48539 62 aa4.69□□□□□ -1.66
TRAF3-209ENST00000560463 MP68P56378 58 aa4.68□□□□□ -1.66
TRAF3-209ENST00000560463 Q75L30 129 aa4.68□□□□□ -1.66
TRAF3-209ENST00000560463 H3BPC8 53 aa4.67□□□□□ -1.66
TRAF3-209ENST00000560463 XP32Q5T750 250 aa4.67□□□□□ -1.66
TRAF3-209ENST00000560463 H0Y9P7 68 aa4.66□□□□□ -1.66
TRAF3-209ENST00000560463 RPL37P61927 97 aaKnown RBP4.64□□□□□ -1.67
TRAF3-209ENST00000560463 KLKP1Q107X0 134 aa4.64□□□□□ -1.67
TRAF3-209ENST00000560463 C20orf197Q8N268 126 aa4.64□□□□□ -1.67
TRAF3-209ENST00000560463 ZCCHC13Q8WW36 166 aaKnown RBP4.64□□□□□ -1.67
TRAF3-209ENST00000560463 LPAP08519 4548 aa4.64□□□□□ -1.67
TRAF3-209ENST00000560463 Q5W150 140 aa4.63□□□□□ -1.67
TRAF3-209ENST00000560463 A0A0U1RQV1 116 aa4.62□□□□□ -1.67
TRAF3-209ENST00000560463 LOC101927531A0A1B0GV80 90 aa4.62□□□□□ -1.67
TRAF3-209ENST00000560463 CCDC179H3BU77 68 aa4.62□□□□□ -1.67
TRAF3-209ENST00000560463 ATP11AUNQ6ZP68 121 aa4.62□□□□□ -1.67
TRAF3-209ENST00000560463 C1orf64Q8NEQ6 169 aa4.62□□□□□ -1.67
TRAF3-209ENST00000560463 LINC00208Q96KT6 92 aa4.62□□□□□ -1.67
TRAF3-209ENST00000560463 LRP2P98164 4655 aa4.6□□□□□ -1.67
TRAF3-209ENST00000560463 NDUFC1O43677 76 aa4.6□□□□□ -1.67
TRAF3-209ENST00000560463 SNURFQ9Y675 71 aa4.59□□□□□ -1.67
TRAF3-209ENST00000560463 HERC1Q15751 4861 aa4.58□□□□□ -1.68
TRAF3-209ENST00000560463 IGKV2-30P06310 120 aa4.57□□□□□ -1.68
TRAF3-209ENST00000560463 CYP4F30PQ9H0H9 118 aa4.57□□□□□ -1.68
TRAF3-209ENST00000560463 SEC61BP60468 96 aaKnown RBP4.56□□□□□ -1.68
TRAF3-209ENST00000560463 C7orf65Q6ZTY9 151 aa4.56□□□□□ -1.68
TRAF3-209ENST00000560463 MUC17Q685J3 4493 aa4.56□□□□□ -1.68
TRAF3-209ENST00000560463 IGKV2D-30A0A075B6S6 120 aa4.54□□□□□ -1.68
TRAF3-209ENST00000560463 H7BZZ5 65 aa4.54□□□□□ -1.68
TRAF3-209ENST00000560463 PCOTHQ58A44 107 aa4.53□□□□□ -1.68
TRAF3-209ENST00000560463 CYSTM1Q9H1C7 97 aa4.53□□□□□ -1.68
TRAF3-209ENST00000560463 HMCN2Q8NDA2 5059 aa4.52□□□□□ -1.69
TRAF3-209ENST00000560463 SPINK7P58062 85 aa4.52□□□□□ -1.69
TRAF3-209ENST00000560463 TMEM258P61165 79 aa4.51□□□□□ -1.69
TRAF3-209ENST00000560463 SPANXA2-OT1Q8N9U9 137 aa4.51□□□□□ -1.69
TRAF3-209ENST00000560463 ATP5EP56381 51 aaPredicted RBP4.49□□□□□ -1.69
TRAF3-209ENST00000560463 HRES1P13985 223 aa4.48□□□□□ -1.69
TRAF3-209ENST00000560463 FAM236DA0A1B0GTK5 79 aa4.45□□□□□ -1.7
TRAF3-209ENST00000560463 H3BS24 57 aa4.45□□□□□ -1.7
TRAF3-209ENST00000560463 FAM236CP0DP71 79 aa4.45□□□□□ -1.7
TRAF3-209ENST00000560463 A8MUN3 132 aa4.43□□□□□ -1.7
TRAF3-209ENST00000560463 C4orf26Q17RF5 130 aa4.42□□□□□ -1.7
TRAF3-209ENST00000560463 COX6B2Q6YFQ2 88 aa4.42□□□□□ -1.7
TRAF3-209ENST00000560463 DMAC1Q96GE9 116 aa4.41□□□□□ -1.7
TRAF3-209ENST00000560463 RBM12B-AS1Q9P1G2 102 aa4.41□□□□□ -1.7
TRAF3-209ENST00000560463 ACYP2P14621 99 aa4.4□□□□□ -1.71
TRAF3-209ENST00000560463 MPLKIPQ8TAP9 179 aa4.4□□□□□ -1.71
TRAF3-209ENST00000560463 KRTAP4-1Q9BYQ7 146 aa4.38□□□□□ -1.71
TRAF3-209ENST00000560463 KRTAP3-1Q9BYR8 98 aa4.36□□□□□ -1.71
TRAF3-209ENST00000560463 SERP1Q9Y6X1 66 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms