RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 BAALC-AS2P0C853 105 aa7.25□□□□□ -1.25
TPM1-223ENST00000560445 KRTAP19-1Q8IUB9 90 aa7.25□□□□□ -1.25
TPM1-223ENST00000560445 C8orf87E5RJ46 101 aa7.24□□□□□ -1.25
TPM1-223ENST00000560445 C9JAW5 83 aa7.23□□□□□ -1.25
TPM1-223ENST00000560445 J3KT08 172 aa7.23□□□□□ -1.25
TPM1-223ENST00000560445 LINC00472Q9H8W2 130 aa7.23□□□□□ -1.25
TPM1-223ENST00000560445 RBM12B-AS1Q9P1G2 102 aa7.23□□□□□ -1.25
TPM1-223ENST00000560445 FLGP20930 4061 aaPredicted RBP7.22□□□□□ -1.25
TPM1-223ENST00000560445 FAM236DA0A1B0GTK5 79 aa7.22□□□□□ -1.25
TPM1-223ENST00000560445 FAM236CP0DP71 79 aa7.22□□□□□ -1.25
TPM1-223ENST00000560445 ATXN8Q156A1 80 aa7.22□□□□□ -1.25
TPM1-223ENST00000560445 DEFB116Q30KQ4 102 aa7.22□□□□□ -1.25
TPM1-223ENST00000560445 IGHV6-1A0A0B4J1U7 121 aa7.21□□□□□ -1.26
TPM1-223ENST00000560445 JMJD7-PLA2G4BH0Y9G9 81 aa7.19□□□□□ -1.26
TPM1-223ENST00000560445 SMIM6P0DI80 62 aa7.19□□□□□ -1.26
TPM1-223ENST00000560445 A0A1B0GVX0 72 aa7.18□□□□□ -1.26
TPM1-223ENST00000560445 A0A1B0GW54 56 aa7.18□□□□□ -1.26
TPM1-223ENST00000560445 KRTAP16-1A8MUX0 517 aa7.18□□□□□ -1.26
TPM1-223ENST00000560445 NDUFB1O75438 58 aa7.18□□□□□ -1.26
TPM1-223ENST00000560445 LYRM7Q5U5X0 104 aa7.18□□□□□ -1.26
TPM1-223ENST00000560445 MTURNQ8N3F0 131 aa7.17□□□□□ -1.26
TPM1-223ENST00000560445 KRTAP4-8A0A0G2JLE6 195 aa7.16□□□□□ -1.26
TPM1-223ENST00000560445 TSTD3H0UI37 97 aa7.16□□□□□ -1.26
TPM1-223ENST00000560445 PDE6GP18545 87 aa7.16□□□□□ -1.26
TPM1-223ENST00000560445 Q6ZQT0 140 aa7.14□□□□□ -1.27
TPM1-223ENST00000560445 NAA38Q9BRA0 125 aaKnown RBP7.14□□□□□ -1.27
TPM1-223ENST00000560445 NOTCH2NLQ7Z3S9 236 aa7.13□□□□□ -1.27
TPM1-223ENST00000560445 LOC110117498A0A087WWA1 95 aa7.11□□□□□ -1.27
TPM1-223ENST00000560445 BATFQ16520 125 aa7.1□□□□□ -1.27
TPM1-223ENST00000560445 ZCCHC13Q8WW36 166 aaKnown RBP7.09□□□□□ -1.27
TPM1-223ENST00000560445 A8MWP4 228 aa7.07□□□□□ -1.28
TPM1-223ENST00000560445 HRES1P13985 223 aa7.07□□□□□ -1.28
TPM1-223ENST00000560445 MPLKIPQ8TAP9 179 aa7.07□□□□□ -1.28
TPM1-223ENST00000560445 C14orf132Q9NPU4 83 aa7.06□□□□□ -1.28
TPM1-223ENST00000560445 NREPQ16612 68 aa7.04□□□□□ -1.28
TPM1-223ENST00000560445 Q8N9P0 234 aaPredicted RBP7.03□□□□□ -1.28
TPM1-223ENST00000560445 KRTAP9-8Q9BYQ0 159 aa7.03□□□□□ -1.28
TPM1-223ENST00000560445 C9orf118A6NHY6 69 aa7.02□□□□□ -1.29
TPM1-223ENST00000560445 SPINK7P58062 85 aa7.02□□□□□ -1.29
TPM1-223ENST00000560445 C8orf17Q9NRJ1 99 aa7.02□□□□□ -1.29
TPM1-223ENST00000560445 H3BT86 120 aa7□□□□□ -1.29
TPM1-223ENST00000560445 Q6ZVQ6 151 aa6.99□□□□□ -1.29
TPM1-223ENST00000560445 IGKV3D-7A0A0C4DH55 119 aa6.98□□□□□ -1.29
TPM1-223ENST00000560445 A0A1W2PPM0 123 aa6.98□□□□□ -1.29
TPM1-223ENST00000560445 PRR15Q8IV56 129 aa6.97□□□□□ -1.29
TPM1-223ENST00000560445 LOC105371267A0A1B0GV96 52 aa6.96□□□□□ -1.3
TPM1-223ENST00000560445 TAX1BP3O14907 124 aa6.95□□□□□ -1.3
TPM1-223ENST00000560445 MT2AP02795 61 aa6.95□□□□□ -1.3
TPM1-223ENST00000560445 TMEM254Q8TBM7 123 aa6.95□□□□□ -1.3
TPM1-223ENST00000560445 WFDC13Q8IUB5 93 aa6.94□□□□□ -1.3
TPM1-223ENST00000560445 KRTAP10-10P60014 251 aa6.93□□□□□ -1.3
TPM1-223ENST00000560445 LCE1DQ5T752 114 aa6.92□□□□□ -1.3
TPM1-223ENST00000560445 MRPL34Q9BQ48 92 aaKnown RBP6.92□□□□□ -1.3
TPM1-223ENST00000560445 KRTAP4-7Q9BYR0 210 aa6.92□□□□□ -1.3
TPM1-223ENST00000560445 BPY2O14599 106 aa6.91□□□□□ -1.3
TPM1-223ENST00000560445 hDV103S1A0JD37 113 aa6.9□□□□□ -1.3
TPM1-223ENST00000560445 SPCS1Q9Y6A9 102 aa6.9□□□□□ -1.3
TPM1-223ENST00000560445 NDUFS5O43920 106 aa6.89□□□□□ -1.31
TPM1-223ENST00000560445 MMP24-AS1A0A0U1RRL7 71 aa6.88□□□□□ -1.31
TPM1-223ENST00000560445 K7EQZ3 153 aa6.87□□□□□ -1.31
TPM1-223ENST00000560445 MT1FP04733 61 aa6.87□□□□□ -1.31
TPM1-223ENST00000560445 LINC00846Q9NV44 126 aa6.87□□□□□ -1.31
TPM1-223ENST00000560445 COL5A1-AS1Q5SY13 56 aa6.85□□□□□ -1.31
TPM1-223ENST00000560445 C7orf65Q6ZTY9 151 aa6.82□□□□□ -1.32
TPM1-223ENST00000560445 USH2AO75445 5202 aa6.81□□□□□ -1.32
TPM1-223ENST00000560445 H1FX-AS1Q4G0G2 97 aa6.81□□□□□ -1.32
TPM1-223ENST00000560445 KRTAP9-3Q9BYQ3 159 aa6.81□□□□□ -1.32
TPM1-223ENST00000560445 CASC2Q6XLA1 102 aa6.8□□□□□ -1.32
TPM1-223ENST00000560445 UBL5Q9BZL1 73 aa6.8□□□□□ -1.32
TPM1-223ENST00000560445 IGKV2D-30A0A075B6S6 120 aa6.78□□□□□ -1.32
TPM1-223ENST00000560445 IGKV2-30P06310 120 aa6.78□□□□□ -1.32
TPM1-223ENST00000560445 CXCL6P80162 114 aa6.77□□□□□ -1.33
TPM1-223ENST00000560445 SSPOA2VEC9 5147 aa6.77□□□□□ -1.33
TPM1-223ENST00000560445 K7EP34 96 aa6.76□□□□□ -1.33
TPM1-223ENST00000560445 Q8N9L7 120 aa6.76□□□□□ -1.33
TPM1-223ENST00000560445 KRTAP9-7A8MTY7 169 aa6.74□□□□□ -1.33
TPM1-223ENST00000560445 HCG22E2RYF7 251 aa6.74□□□□□ -1.33
TPM1-223ENST00000560445 GTF2H5Q6ZYL4 71 aa6.74□□□□□ -1.33
TPM1-223ENST00000560445 KRTAP4-9Q9BYQ8 210 aa6.74□□□□□ -1.33
TPM1-223ENST00000560445 PRO0461Q9UI25 63 aa6.72□□□□□ -1.33
TPM1-223ENST00000560445 Q5W150 140 aa6.71□□□□□ -1.34
TPM1-223ENST00000560445 F8W1H4 67 aa6.69□□□□□ -1.34
TPM1-223ENST00000560445 FCGBPQ9Y6R7 5405 aaPredicted RBP6.67□□□□□ -1.34
TPM1-223ENST00000560445 PCP4L1A6NKN8 68 aa6.65□□□□□ -1.34
TPM1-223ENST00000560445 TP53AIP1Q9HCN2 124 aa6.64□□□□□ -1.35
TPM1-223ENST00000560445 C4orf26Q17RF5 130 aa6.63□□□□□ -1.35
TPM1-223ENST00000560445 KRTAP19-6Q3LI70 58 aa6.63□□□□□ -1.35
TPM1-223ENST00000560445 KRTAP4-2Q9BYR5 136 aa6.63□□□□□ -1.35
TPM1-223ENST00000560445 ETDBQ3ZM63 59 aa6.62□□□□□ -1.35
TPM1-223ENST00000560445 LCE4AQ5TA78 99 aa6.59□□□□□ -1.35
TPM1-223ENST00000560445 FAM236AA0A1B0GUQ0 79 aa6.56□□□□□ -1.36
TPM1-223ENST00000560445 FAM236BA0A1B0GV22 79 aa6.56□□□□□ -1.36
TPM1-223ENST00000560445 S4R3F8 94 aa6.56□□□□□ -1.36
TPM1-223ENST00000560445 ACYP1P07311 99 aa6.55□□□□□ -1.36
TPM1-223ENST00000560445 CSAG1Q6PB30 78 aa6.55□□□□□ -1.36
TPM1-223ENST00000560445 C1orf64Q8NEQ6 169 aa6.54□□□□□ -1.36
TPM1-223ENST00000560445 MACF1Q9UPN3 7388 aaKnown RBP6.53□□□□□ -1.36
TPM1-223ENST00000560445 C5orf47Q569G3 176 aa6.53□□□□□ -1.36
TPM1-223ENST00000560445 SYNE2Q8WXH0 6885 aaKnown RBP6.5□□□□□ -1.37
TPM1-223ENST00000560445 KRTAP4-11Q9BYQ6 195 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms