RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 IGFL1Q6UW32 110 aa5.25□□□□□ -1.57
SMAD3-215ENST00000560424 LINC00846Q9NV44 126 aa5.25□□□□□ -1.57
SMAD3-215ENST00000560424 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.24□□□□□ -1.57
SMAD3-215ENST00000560424 SSBP3-AS1Q7Z2R9 100 aa5.24□□□□□ -1.57
SMAD3-215ENST00000560424 FAM236AA0A1B0GUQ0 79 aa5.22□□□□□ -1.57
SMAD3-215ENST00000560424 FAM236BA0A1B0GV22 79 aa5.22□□□□□ -1.57
SMAD3-215ENST00000560424 M0R2T5 61 aa5.22□□□□□ -1.57
SMAD3-215ENST00000560424 MT1HP80294 61 aa5.22□□□□□ -1.57
SMAD3-215ENST00000560424 ATOX1O00244 68 aa5.21□□□□□ -1.58
SMAD3-215ENST00000560424 HIST1H4AP62805 103 aaKnown RBP5.21□□□□□ -1.58
SMAD3-215ENST00000560424 CD164Q04900 197 aa5.21□□□□□ -1.58
SMAD3-215ENST00000560424 NREPQ16612 68 aa5.21□□□□□ -1.58
SMAD3-215ENST00000560424 IGLV9-49A0A0B4J1Y8 123 aa5.2□□□□□ -1.58
SMAD3-215ENST00000560424 CXCL6P80162 114 aa5.2□□□□□ -1.58
SMAD3-215ENST00000560424 MOBPQ13875 183 aa5.2□□□□□ -1.58
SMAD3-215ENST00000560424 LCE2CQ5TA81 110 aa5.2□□□□□ -1.58
SMAD3-215ENST00000560424 C9orf153Q5TBE3 101 aa5.2□□□□□ -1.58
SMAD3-215ENST00000560424 LORP23490 312 aaPredicted RBP5.19□□□□□ -1.58
SMAD3-215ENST00000560424 KRTAP10-6P60371 365 aaPredicted RBP5.19□□□□□ -1.58
SMAD3-215ENST00000560424 Q6ZVQ6 151 aa5.19□□□□□ -1.58
SMAD3-215ENST00000560424 IGKV3D-7A0A0C4DH55 119 aa5.18□□□□□ -1.58
SMAD3-215ENST00000560424 UQCRQO14949 82 aa5.18□□□□□ -1.58
SMAD3-215ENST00000560424 CCDC179H3BU77 68 aa5.17□□□□□ -1.58
SMAD3-215ENST00000560424 SMIM20Q8N5G0 67 aa5.17□□□□□ -1.58
SMAD3-215ENST00000560424 A0A087WSZ3 146 aa5.16□□□□□ -1.58
SMAD3-215ENST00000560424 COX7CP15954 63 aa5.16□□□□□ -1.58
SMAD3-215ENST00000560424 Q5XG85 94 aa5.16□□□□□ -1.58
SMAD3-215ENST00000560424 SS18L2Q9UHA2 77 aa5.16□□□□□ -1.58
SMAD3-215ENST00000560424 A0A0G2JQZ4 141 aa5.15□□□□□ -1.59
SMAD3-215ENST00000560424 SPINK1P00995 79 aa5.15□□□□□ -1.59
SMAD3-215ENST00000560424 BPY2O14599 106 aa5.14□□□□□ -1.59
SMAD3-215ENST00000560424 RPS29P62273 56 aaKnown RBP5.14□□□□□ -1.59
SMAD3-215ENST00000560424 XP32Q5T750 250 aa5.14□□□□□ -1.59
SMAD3-215ENST00000560424 SERP2Q8N6R1 65 aa5.13□□□□□ -1.59
SMAD3-215ENST00000560424 KRTAP19-2Q3LHN2 52 aa5.12□□□□□ -1.59
SMAD3-215ENST00000560424 COX6B2Q6YFQ2 88 aa5.12□□□□□ -1.59
SMAD3-215ENST00000560424 LINC00472Q9H8W2 130 aa5.12□□□□□ -1.59
SMAD3-215ENST00000560424 J3KT08 172 aa5.11□□□□□ -1.59
SMAD3-215ENST00000560424 A0A087WVE0 104 aa5.1□□□□□ -1.59
SMAD3-215ENST00000560424 LCE2BO14633 110 aa5.1□□□□□ -1.59
SMAD3-215ENST00000560424 PCOTHQ58A44 107 aa5.1□□□□□ -1.59
SMAD3-215ENST00000560424 Q96NJ1 140 aa5.09□□□□□ -1.59
SMAD3-215ENST00000560424 LIMD2Q9BT23 127 aa5.09□□□□□ -1.59
SMAD3-215ENST00000560424 DSCR10P59022 87 aa5.08□□□□□ -1.6
SMAD3-215ENST00000560424 TRAV7A0A075B6U4 112 aa5.07□□□□□ -1.6
SMAD3-215ENST00000560424 HRCT1Q6UXD1 115 aa5.07□□□□□ -1.6
SMAD3-215ENST00000560424 A8MWP4 228 aa5.05□□□□□ -1.6
SMAD3-215ENST00000560424 NDUFB1O75438 58 aa5.05□□□□□ -1.6
SMAD3-215ENST00000560424 IGKV4-1P06312 121 aa5.05□□□□□ -1.6
SMAD3-215ENST00000560424 PRR15Q8IV56 129 aa5.04□□□□□ -1.6
SMAD3-215ENST00000560424 TMEM258P61165 79 aa5.03□□□□□ -1.6
SMAD3-215ENST00000560424 K7EQZ3 153 aa5.02□□□□□ -1.61
SMAD3-215ENST00000560424 C1orf195Q5TG92 126 aa5.02□□□□□ -1.61
SMAD3-215ENST00000560424 C9orf92A6NGG3 77 aa5.01□□□□□ -1.61
SMAD3-215ENST00000560424 RPS28P62857 69 aaKnown RBP5.01□□□□□ -1.61
SMAD3-215ENST00000560424 DEFB116Q30KQ4 102 aa5.01□□□□□ -1.61
SMAD3-215ENST00000560424 A0A1B0GVX0 72 aa5□□□□□ -1.61
SMAD3-215ENST00000560424 NDUFC1O43677 76 aa5□□□□□ -1.61
SMAD3-215ENST00000560424 Q8N9L7 120 aa5□□□□□ -1.61
SMAD3-215ENST00000560424 KLKP1Q107X0 134 aa4.99□□□□□ -1.61
SMAD3-215ENST00000560424 SSPOA2VEC9 5147 aa4.99□□□□□ -1.61
SMAD3-215ENST00000560424 HCG22E2RYF7 251 aa4.98□□□□□ -1.61
SMAD3-215ENST00000560424 C8orf87E5RJ46 101 aa4.97□□□□□ -1.61
SMAD3-215ENST00000560424 C20orf197Q8N268 126 aa4.97□□□□□ -1.61
SMAD3-215ENST00000560424 MMP24-AS1A0A0U1RRL7 71 aa4.96□□□□□ -1.62
SMAD3-215ENST00000560424 C8orf17Q9NRJ1 99 aa4.96□□□□□ -1.62
SMAD3-215ENST00000560424 MACF1Q9UPN3 7388 aaKnown RBP4.96□□□□□ -1.62
SMAD3-215ENST00000560424 USH2AO75445 5202 aa4.96□□□□□ -1.62
SMAD3-215ENST00000560424 SYNE2Q8WXH0 6885 aaKnown RBP4.95□□□□□ -1.62
SMAD3-215ENST00000560424 C5orf47Q569G3 176 aa4.95□□□□□ -1.62
SMAD3-215ENST00000560424 FLGP20930 4061 aaPredicted RBP4.95□□□□□ -1.62
SMAD3-215ENST00000560424 CASC2Q6XLA1 102 aa4.94□□□□□ -1.62
SMAD3-215ENST00000560424 OCR1Q9BZK8 76 aa4.94□□□□□ -1.62
SMAD3-215ENST00000560424 IGHV6-1A0A0B4J1U7 121 aa4.93□□□□□ -1.62
SMAD3-215ENST00000560424 hDV103S1A0JD37 113 aa4.93□□□□□ -1.62
SMAD3-215ENST00000560424 MP68P56378 58 aa4.93□□□□□ -1.62
SMAD3-215ENST00000560424 ATP5EP56381 51 aaPredicted RBP4.93□□□□□ -1.62
SMAD3-215ENST00000560424 TMEM254Q8TBM7 123 aa4.93□□□□□ -1.62
SMAD3-215ENST00000560424 CYSTM1Q9H1C7 97 aa4.93□□□□□ -1.62
SMAD3-215ENST00000560424 H7BZZ5 65 aa4.92□□□□□ -1.62
SMAD3-215ENST00000560424 TP53AIP1Q9HCN2 124 aa4.92□□□□□ -1.62
SMAD3-215ENST00000560424 FAM236DA0A1B0GTK5 79 aa4.91□□□□□ -1.62
SMAD3-215ENST00000560424 H3BPC8 53 aa4.91□□□□□ -1.62
SMAD3-215ENST00000560424 FAM236CP0DP71 79 aa4.91□□□□□ -1.62
SMAD3-215ENST00000560424 LINC00313P59037 77 aa4.91□□□□□ -1.62
SMAD3-215ENST00000560424 KRTAP19-1Q8IUB9 90 aa4.91□□□□□ -1.62
SMAD3-215ENST00000560424 FCGBPQ9Y6R7 5405 aaPredicted RBP4.91□□□□□ -1.62
SMAD3-215ENST00000560424 NOTCH2NLQ7Z3S9 236 aa4.9□□□□□ -1.63
SMAD3-215ENST00000560424 WFDC13Q8IUB5 93 aa4.9□□□□□ -1.63
SMAD3-215ENST00000560424 MRPL34Q9BQ48 92 aaKnown RBP4.9□□□□□ -1.63
SMAD3-215ENST00000560424 KRTAP16-1A8MUX0 517 aa4.89□□□□□ -1.63
SMAD3-215ENST00000560424 RPL37P61927 97 aaKnown RBP4.89□□□□□ -1.63
SMAD3-215ENST00000560424 Q8N9P0 234 aaPredicted RBP4.89□□□□□ -1.63
SMAD3-215ENST00000560424 SNURFQ9Y675 71 aa4.88□□□□□ -1.63
SMAD3-215ENST00000560424 SERP1Q9Y6X1 66 aa4.88□□□□□ -1.63
SMAD3-215ENST00000560424 SVIPQ8NHG7 77 aa4.87□□□□□ -1.63
SMAD3-215ENST00000560424 LOC100996750A0A140TA64 210 aa4.86□□□□□ -1.63
SMAD3-215ENST00000560424 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
SMAD3-215ENST00000560424 C20orf166-AS1Q96NR2 134 aa4.84□□□□□ -1.63
SMAD3-215ENST00000560424 KRTAP9-8Q9BYQ0 159 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms