RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 ZNF706Q9Y5V0 76 aaPredicted RBP8.41□□□□□ -1.06
CARMIL3-203ENST00000560349 DYNC1H1Q14204 4646 aaKnown RBP8.41□□□□□ -1.06
CARMIL3-203ENST00000560349 WFDC13Q8IUB5 93 aa8.4□□□□□ -1.06
CARMIL3-203ENST00000560349 C1orf64Q8NEQ6 169 aa8.39□□□□□ -1.07
CARMIL3-203ENST00000560349 A8MUN3 132 aa8.37□□□□□ -1.07
CARMIL3-203ENST00000560349 LINC00472Q9H8W2 130 aa8.36□□□□□ -1.07
CARMIL3-203ENST00000560349 FAT1Q14517 4588 aa8.35□□□□□ -1.07
CARMIL3-203ENST00000560349 A0A087X002 238 aa8.35□□□□□ -1.07
CARMIL3-203ENST00000560349 KRTAP29-1A8MX34 341 aaPredicted RBP8.35□□□□□ -1.07
CARMIL3-203ENST00000560349 PRR4Q16378 134 aa8.34□□□□□ -1.07
CARMIL3-203ENST00000560349 SMR3BP02814 79 aaPredicted RBP8.33□□□□□ -1.08
CARMIL3-203ENST00000560349 Q96NJ1 140 aa8.32□□□□□ -1.08
CARMIL3-203ENST00000560349 Q5VV11 94 aa8.31□□□□□ -1.08
CARMIL3-203ENST00000560349 SPTSSBQ8NFR3 76 aa8.31□□□□□ -1.08
CARMIL3-203ENST00000560349 SPINK6Q6UWN8 80 aa8.3□□□□□ -1.08
CARMIL3-203ENST00000560349 A8MWP4 228 aa8.29□□□□□ -1.08
CARMIL3-203ENST00000560349 H3BS24 57 aa8.29□□□□□ -1.08
CARMIL3-203ENST00000560349 CASC2Q6XLA1 102 aa8.29□□□□□ -1.08
CARMIL3-203ENST00000560349 MP68P56378 58 aa8.29□□□□□ -1.08
CARMIL3-203ENST00000560349 LINC00208Q96KT6 92 aa8.29□□□□□ -1.08
CARMIL3-203ENST00000560349 CYP4F30PQ9H0H9 118 aa8.29□□□□□ -1.08
CARMIL3-203ENST00000560349 APOBP04114 4563 aaKnown RBP8.28□□□□□ -1.08
CARMIL3-203ENST00000560349 C8orf87E5RJ46 101 aa8.28□□□□□ -1.08
CARMIL3-203ENST00000560349 KRTAP13-2Q52LG2 175 aa8.28□□□□□ -1.08
CARMIL3-203ENST00000560349 RYR3Q15413 4870 aa8.28□□□□□ -1.08
CARMIL3-203ENST00000560349 NDUFB1O75438 58 aa8.26□□□□□ -1.09
CARMIL3-203ENST00000560349 H0Y9P7 68 aa8.25□□□□□ -1.09
CARMIL3-203ENST00000560349 IGHV6-1A0A0B4J1U7 121 aa8.25□□□□□ -1.09
CARMIL3-203ENST00000560349 CHKB-CPT1BH3BT56 60 aa8.25□□□□□ -1.09
CARMIL3-203ENST00000560349 NDUFS5O43920 106 aa8.24□□□□□ -1.09
CARMIL3-203ENST00000560349 A6NN06 94 aa8.24□□□□□ -1.09
CARMIL3-203ENST00000560349 KRTAP1-4P0C5Y4 121 aa8.23□□□□□ -1.09
CARMIL3-203ENST00000560349 A0A1B0GVY2 172 aa8.23□□□□□ -1.09
CARMIL3-203ENST00000560349 LCA10Q71F78 164 aa8.22□□□□□ -1.09
CARMIL3-203ENST00000560349 NOTCH2NLQ7Z3S9 236 aa8.22□□□□□ -1.09
CARMIL3-203ENST00000560349 MMP24-AS1A0A0U1RRL7 71 aa8.22□□□□□ -1.09
CARMIL3-203ENST00000560349 ATP11AUNQ6ZP68 121 aa8.21□□□□□ -1.1
CARMIL3-203ENST00000560349 PLA2G1BP04054 148 aaKnown RBP8.19□□□□□ -1.1
CARMIL3-203ENST00000560349 H3BPC8 53 aa8.19□□□□□ -1.1
CARMIL3-203ENST00000560349 CDK2AP2O75956 126 aa8.17□□□□□ -1.1
CARMIL3-203ENST00000560349 SSBP3-AS1Q7Z2R9 100 aa8.17□□□□□ -1.1
CARMIL3-203ENST00000560349 SPANXA2-OT1Q8N9U9 137 aa8.17□□□□□ -1.1
CARMIL3-203ENST00000560349 A0A1B0GVX0 72 aa8.16□□□□□ -1.1
CARMIL3-203ENST00000560349 C7orf65Q6ZTY9 151 aa8.16□□□□□ -1.1
CARMIL3-203ENST00000560349 C8orf17Q9NRJ1 99 aa8.16□□□□□ -1.1
CARMIL3-203ENST00000560349 Q8N9P0 234 aaPredicted RBP8.15□□□□□ -1.11
CARMIL3-203ENST00000560349 PRR15LQ9BU68 103 aa8.15□□□□□ -1.11
CARMIL3-203ENST00000560349 PRR26Q8N8Z3 221 aa8.14□□□□□ -1.11
CARMIL3-203ENST00000560349 ASB16-AS1Q495Z4 193 aa8.13□□□□□ -1.11
CARMIL3-203ENST00000560349 TYMSOSQ8TAI1 123 aa8.12□□□□□ -1.11
CARMIL3-203ENST00000560349 A6NED7 52 aa8.11□□□□□ -1.11
CARMIL3-203ENST00000560349 LIMD2Q9BT23 127 aa8.1□□□□□ -1.11
CARMIL3-203ENST00000560349 IGLV7-46A0A075B6I9 117 aa8.07□□□□□ -1.12
CARMIL3-203ENST00000560349 PCOTHQ58A44 107 aa8.07□□□□□ -1.12
CARMIL3-203ENST00000560349 Q75L30 129 aa8.06□□□□□ -1.12
CARMIL3-203ENST00000560349 TP53AIP1Q9HCN2 124 aa8.06□□□□□ -1.12
CARMIL3-203ENST00000560349 LRP1Q07954 4544 aaKnown RBP8.06□□□□□ -1.12
CARMIL3-203ENST00000560349 KRTAP10-4P60372 401 aaPredicted RBP8.06□□□□□ -1.12
CARMIL3-203ENST00000560349 MRPL34Q9BQ48 92 aaKnown RBP8.05□□□□□ -1.12
CARMIL3-203ENST00000560349 CDC42SE1Q9NRR8 79 aa8.05□□□□□ -1.12
CARMIL3-203ENST00000560349 HSPG2P98160 4391 aa8.05□□□□□ -1.12
CARMIL3-203ENST00000560349 COA5Q86WW8 74 aa8.04□□□□□ -1.12
CARMIL3-203ENST00000560349 PKHD1L1Q86WI1 4243 aa8.02□□□□□ -1.13
CARMIL3-203ENST00000560349 RETNLBQ9BQ08 111 aa8.01□□□□□ -1.13
CARMIL3-203ENST00000560349 KIAA1109Q2LD37 5005 aa8.01□□□□□ -1.13
CARMIL3-203ENST00000560349 PRAC1Q96KF2 57 aa8.01□□□□□ -1.13
CARMIL3-203ENST00000560349 LOC101927531A0A1B0GV80 90 aa8□□□□□ -1.13
CARMIL3-203ENST00000560349 FLG2Q5D862 2391 aaPredicted RBP8□□□□□ -1.13
CARMIL3-203ENST00000560349 LINC00304Q8N9R0 145 aa7.99□□□□□ -1.13
CARMIL3-203ENST00000560349 EPPK1P58107 5090 aaKnown RBP7.99□□□□□ -1.13
CARMIL3-203ENST00000560349 LINC00313P59037 77 aa7.98□□□□□ -1.13
CARMIL3-203ENST00000560349 Q5W150 140 aa7.98□□□□□ -1.13
CARMIL3-203ENST00000560349 RYR1P21817 5038 aa7.96□□□□□ -1.13
CARMIL3-203ENST00000560349 MYCBP2O75592 4640 aa7.96□□□□□ -1.14
CARMIL3-203ENST00000560349 SPINK1P00995 79 aa7.96□□□□□ -1.14
CARMIL3-203ENST00000560349 LINC01554Q52M75 96 aa7.96□□□□□ -1.14
CARMIL3-203ENST00000560349 ADM2Q7Z4H4 148 aa7.93□□□□□ -1.14
CARMIL3-203ENST00000560349 KRTAP17-1Q9BYP8 105 aa7.93□□□□□ -1.14
CARMIL3-203ENST00000560349 HRES1P13985 223 aa7.92□□□□□ -1.14
CARMIL3-203ENST00000560349 Q5VSD8 79 aa7.9□□□□□ -1.14
CARMIL3-203ENST00000560349 SPAG11AQ6PDA7 123 aa7.9□□□□□ -1.14
CARMIL3-203ENST00000560349 SPINK7P58062 85 aa7.9□□□□□ -1.15
CARMIL3-203ENST00000560349 KRTAP13-3Q3SY46 172 aa7.89□□□□□ -1.15
CARMIL3-203ENST00000560349 KRTAP16-1A8MUX0 517 aa7.88□□□□□ -1.15
CARMIL3-203ENST00000560349 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
CARMIL3-203ENST00000560349 TNXBP22105 4242 aa7.88□□□□□ -1.15
CARMIL3-203ENST00000560349 DMBT1Q9UGM3 2413 aaPredicted RBP7.88□□□□□ -1.15
CARMIL3-203ENST00000560349 C9orf92A6NGG3 77 aa7.86□□□□□ -1.15
CARMIL3-203ENST00000560349 LINC01558Q9Y6Z2 57 aa7.86□□□□□ -1.15
CARMIL3-203ENST00000560349 Q8N1X5 172 aa7.81□□□□□ -1.16
CARMIL3-203ENST00000560349 FAT3Q8TDW7 4589 aa7.8□□□□□ -1.16
CARMIL3-203ENST00000560349 RPS29P62273 56 aaKnown RBP7.78□□□□□ -1.16
CARMIL3-203ENST00000560349 IGKV2D-30A0A075B6S6 120 aa7.77□□□□□ -1.16
CARMIL3-203ENST00000560349 IGKV2-30P06310 120 aa7.77□□□□□ -1.16
CARMIL3-203ENST00000560349 ACYP2P14621 99 aa7.73□□□□□ -1.17
CARMIL3-203ENST00000560349 DMAC1Q96GE9 116 aa7.7□□□□□ -1.18
CARMIL3-203ENST00000560349 KRTAP10-8P60410 259 aa7.69□□□□□ -1.18
CARMIL3-203ENST00000560349 CSAG1Q6PB30 78 aa7.64□□□□□ -1.19
CARMIL3-203ENST00000560349 KRTAP4-5Q9BYR2 181 aa7.64□□□□□ -1.19
CARMIL3-203ENST00000560349 ABCA13Q86UQ4 5058 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms