RNA–Protein interactions for RNA: ENST00000560336.6

LINC00520-206, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 883 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-206ENST00000560336 NOTCH2NLQ7Z3S9 236 aa4.61□□□□□ -1.67
LINC00520-206ENST00000560336 IMUPQ9GZP8 106 aa4.61□□□□□ -1.67
LINC00520-206ENST00000560336 BPY2O14599 106 aa4.6□□□□□ -1.67
LINC00520-206ENST00000560336 SCGB1A1P11684 91 aa4.6□□□□□ -1.67
LINC00520-206ENST00000560336 CXCL6P80162 114 aa4.6□□□□□ -1.67
LINC00520-206ENST00000560336 SSBP3-AS1Q7Z2R9 100 aa4.6□□□□□ -1.67
LINC00520-206ENST00000560336 A0A087X002 238 aa4.58□□□□□ -1.68
LINC00520-206ENST00000560336 CDK2AP2O75956 126 aa4.58□□□□□ -1.68
LINC00520-206ENST00000560336 SS18L2Q9UHA2 77 aa4.58□□□□□ -1.68
LINC00520-206ENST00000560336 KRTAP1-4P0C5Y4 121 aa4.57□□□□□ -1.68
LINC00520-206ENST00000560336 KRTAP13-2Q52LG2 175 aa4.57□□□□□ -1.68
LINC00520-206ENST00000560336 TYMSOSQ8TAI1 123 aa4.57□□□□□ -1.68
LINC00520-206ENST00000560336 A0A087WVE0 104 aa4.56□□□□□ -1.68
LINC00520-206ENST00000560336 FAM236AA0A1B0GUQ0 79 aa4.56□□□□□ -1.68
LINC00520-206ENST00000560336 FAM236BA0A1B0GV22 79 aa4.56□□□□□ -1.68
LINC00520-206ENST00000560336 KRTAP10-4P60372 401 aaPredicted RBP4.56□□□□□ -1.68
LINC00520-206ENST00000560336 CD164Q04900 197 aa4.56□□□□□ -1.68
LINC00520-206ENST00000560336 DEFB116Q30KQ4 102 aa4.56□□□□□ -1.68
LINC00520-206ENST00000560336 Q5VSD8 79 aa4.55□□□□□ -1.68
LINC00520-206ENST00000560336 KMT2CQ8NEZ4 4911 aaKnown RBP4.55□□□□□ -1.68
LINC00520-206ENST00000560336 PKHD1P08F94 4074 aa4.54□□□□□ -1.68
LINC00520-206ENST00000560336 DYNC1H1Q14204 4646 aaKnown RBP4.54□□□□□ -1.68
LINC00520-206ENST00000560336 Q8N9L7 120 aa4.54□□□□□ -1.68
LINC00520-206ENST00000560336 J3KT08 172 aa4.53□□□□□ -1.68
LINC00520-206ENST00000560336 IGKV4-1P06312 121 aa4.53□□□□□ -1.68
LINC00520-206ENST00000560336 LRP1BQ9NZR2 4599 aa4.52□□□□□ -1.69
LINC00520-206ENST00000560336 DSCR10P59022 87 aa4.52□□□□□ -1.69
LINC00520-206ENST00000560336 ANAPC13Q9BS18 74 aa4.52□□□□□ -1.69
LINC00520-206ENST00000560336 LIMD2Q9BT23 127 aa4.52□□□□□ -1.69
LINC00520-206ENST00000560336 LINC00472Q9H8W2 130 aa4.52□□□□□ -1.69
LINC00520-206ENST00000560336 K7EQZ3 153 aa4.51□□□□□ -1.69
LINC00520-206ENST00000560336 NDUFB1O75438 58 aa4.51□□□□□ -1.69
LINC00520-206ENST00000560336 ATOX1O00244 68 aa4.5□□□□□ -1.69
LINC00520-206ENST00000560336 LINC00304Q8N9R0 145 aa4.5□□□□□ -1.69
LINC00520-206ENST00000560336 Q96NJ1 140 aa4.5□□□□□ -1.69
LINC00520-206ENST00000560336 APOBP04114 4563 aaKnown RBP4.5□□□□□ -1.69
LINC00520-206ENST00000560336 A8MWP4 228 aa4.49□□□□□ -1.69
LINC00520-206ENST00000560336 SPAG11AQ6PDA7 123 aa4.49□□□□□ -1.69
LINC00520-206ENST00000560336 SPINK1P00995 79 aa4.48□□□□□ -1.69
LINC00520-206ENST00000560336 ASB16-AS1Q495Z4 193 aa4.48□□□□□ -1.69
LINC00520-206ENST00000560336 VPS13BQ7Z7G8 4022 aa4.48□□□□□ -1.69
LINC00520-206ENST00000560336 PKHD1L1Q86WI1 4243 aa4.48□□□□□ -1.69
LINC00520-206ENST00000560336 HCG22E2RYF7 251 aa4.47□□□□□ -1.69
LINC00520-206ENST00000560336 WFDC13Q8IUB5 93 aa4.47□□□□□ -1.69
LINC00520-206ENST00000560336 PRR15Q8IV56 129 aa4.47□□□□□ -1.69
LINC00520-206ENST00000560336 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
LINC00520-206ENST00000560336 RYR3Q15413 4870 aa4.46□□□□□ -1.69
LINC00520-206ENST00000560336 A0A1B0GVX0 72 aa4.46□□□□□ -1.7
LINC00520-206ENST00000560336 Q5XG85 94 aa4.46□□□□□ -1.7
LINC00520-206ENST00000560336 IGHV6-1A0A0B4J1U7 121 aa4.45□□□□□ -1.7
LINC00520-206ENST00000560336 KRTAP16-1A8MUX0 517 aa4.45□□□□□ -1.7
LINC00520-206ENST00000560336 CASC2Q6XLA1 102 aa4.45□□□□□ -1.7
LINC00520-206ENST00000560336 SMIM20Q8N5G0 67 aa4.45□□□□□ -1.7
LINC00520-206ENST00000560336 RPS29P62273 56 aaKnown RBP4.44□□□□□ -1.7
LINC00520-206ENST00000560336 C1orf195Q5TG92 126 aa4.44□□□□□ -1.7
LINC00520-206ENST00000560336 TRAV7A0A075B6U4 112 aa4.43□□□□□ -1.7
LINC00520-206ENST00000560336 MMP24-AS1A0A0U1RRL7 71 aa4.43□□□□□ -1.7
LINC00520-206ENST00000560336 NDUFAF8A1L188 74 aa4.43□□□□□ -1.7
LINC00520-206ENST00000560336 SERP2Q8N6R1 65 aa4.43□□□□□ -1.7
LINC00520-206ENST00000560336 C8orf17Q9NRJ1 99 aa4.43□□□□□ -1.7
LINC00520-206ENST00000560336 hDV103S1A0JD37 113 aa4.42□□□□□ -1.7
LINC00520-206ENST00000560336 COX7CP15954 63 aa4.42□□□□□ -1.7
LINC00520-206ENST00000560336 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
LINC00520-206ENST00000560336 C8orf87E5RJ46 101 aa4.41□□□□□ -1.7
LINC00520-206ENST00000560336 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
LINC00520-206ENST00000560336 CCDC179H3BU77 68 aa4.4□□□□□ -1.71
LINC00520-206ENST00000560336 UQCRQO14949 82 aa4.4□□□□□ -1.71
LINC00520-206ENST00000560336 KRTAP10-8P60410 259 aa4.4□□□□□ -1.71
LINC00520-206ENST00000560336 NDUFS5O43920 106 aa4.39□□□□□ -1.71
LINC00520-206ENST00000560336 LINC00313P59037 77 aa4.39□□□□□ -1.71
LINC00520-206ENST00000560336 OCR1Q9BZK8 76 aa4.39□□□□□ -1.71
LINC00520-206ENST00000560336 HSPG2P98160 4391 aa4.39□□□□□ -1.71
LINC00520-206ENST00000560336 TMEM254Q8TBM7 123 aa4.38□□□□□ -1.71
LINC00520-206ENST00000560336 MRPL34Q9BQ48 92 aaKnown RBP4.38□□□□□ -1.71
LINC00520-206ENST00000560336 FAT1Q14517 4588 aa4.37□□□□□ -1.71
LINC00520-206ENST00000560336 OXTP01178 125 aa4.36□□□□□ -1.71
LINC00520-206ENST00000560336 C20orf197Q8N268 126 aa4.36□□□□□ -1.71
LINC00520-206ENST00000560336 RETNLBQ9BQ08 111 aa4.36□□□□□ -1.71
LINC00520-206ENST00000560336 RYR1P21817 5038 aa4.36□□□□□ -1.71
LINC00520-206ENST00000560336 FLG2Q5D862 2391 aaPredicted RBP4.35□□□□□ -1.71
LINC00520-206ENST00000560336 IGLV7-46A0A075B6I9 117 aa4.34□□□□□ -1.71
LINC00520-206ENST00000560336 C5orf47Q569G3 176 aa4.34□□□□□ -1.71
LINC00520-206ENST00000560336 TP53AIP1Q9HCN2 124 aa4.34□□□□□ -1.71
LINC00520-206ENST00000560336 EPPK1P58107 5090 aaKnown RBP4.33□□□□□ -1.72
LINC00520-206ENST00000560336 H0Y9P7 68 aa4.33□□□□□ -1.72
LINC00520-206ENST00000560336 MT1HL1P0DM35 61 aa4.33□□□□□ -1.72
LINC00520-206ENST00000560336 MP68P56378 58 aa4.33□□□□□ -1.72
LINC00520-206ENST00000560336 SNURFQ9Y675 71 aa4.33□□□□□ -1.72
LINC00520-206ENST00000560336 KIAA1109Q2LD37 5005 aa4.32□□□□□ -1.72
LINC00520-206ENST00000560336 C9orf92A6NGG3 77 aa4.32□□□□□ -1.72
LINC00520-206ENST00000560336 TRAV22A0A0B4J277 110 aa4.31□□□□□ -1.72
LINC00520-206ENST00000560336 A0A0U1RQV1 116 aa4.3□□□□□ -1.72
LINC00520-206ENST00000560336 FP248Q71RG6 208 aaPredicted RBP4.3□□□□□ -1.72
LINC00520-206ENST00000560336 LINC00208Q96KT6 92 aa4.3□□□□□ -1.72
LINC00520-206ENST00000560336 H3BPC8 53 aa4.29□□□□□ -1.72
LINC00520-206ENST00000560336 KLKP1Q107X0 134 aa4.29□□□□□ -1.72
LINC00520-206ENST00000560336 C1orf64Q8NEQ6 169 aa4.28□□□□□ -1.72
LINC00520-206ENST00000560336 CYSTM1Q9H1C7 97 aa4.28□□□□□ -1.72
LINC00520-206ENST00000560336 NDUFC1O43677 76 aa4.27□□□□□ -1.73
LINC00520-206ENST00000560336 PRR4Q16378 134 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms