RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 Q8N9L7 120 aa6.17□□□□□ -1.42
CRTC3-209ENST00000560320 K7EQZ3 153 aa6.16□□□□□ -1.42
CRTC3-209ENST00000560320 ANAPC13Q9BS18 74 aa6.16□□□□□ -1.42
CRTC3-209ENST00000560320 RPS29P62273 56 aaKnown RBP6.15□□□□□ -1.42
CRTC3-209ENST00000560320 Q96NJ1 140 aa6.15□□□□□ -1.42
CRTC3-209ENST00000560320 PCP4P48539 62 aa6.14□□□□□ -1.43
CRTC3-209ENST00000560320 PRR15Q8IV56 129 aa6.14□□□□□ -1.43
CRTC3-209ENST00000560320 HCG22E2RYF7 251 aa6.13□□□□□ -1.43
CRTC3-209ENST00000560320 PKHD1L1Q86WI1 4243 aa6.13□□□□□ -1.43
CRTC3-209ENST00000560320 SMIM20Q8N5G0 67 aa6.12□□□□□ -1.43
CRTC3-209ENST00000560320 A0A1B0GVX0 72 aa6.11□□□□□ -1.43
CRTC3-209ENST00000560320 LRP2P98164 4655 aa6.11□□□□□ -1.43
CRTC3-209ENST00000560320 C1orf195Q5TG92 126 aa6.1□□□□□ -1.43
CRTC3-209ENST00000560320 IGHV6-1A0A0B4J1U7 121 aa6.09□□□□□ -1.43
CRTC3-209ENST00000560320 CASC2Q6XLA1 102 aa6.09□□□□□ -1.43
CRTC3-209ENST00000560320 WFDC13Q8IUB5 93 aa6.09□□□□□ -1.43
CRTC3-209ENST00000560320 C8orf87E5RJ46 101 aa6.08□□□□□ -1.44
CRTC3-209ENST00000560320 C8orf17Q9NRJ1 99 aa6.08□□□□□ -1.44
CRTC3-209ENST00000560320 FAT4Q6V0I7 4981 aa6.08□□□□□ -1.44
CRTC3-209ENST00000560320 SERP2Q8N6R1 65 aa6.07□□□□□ -1.44
CRTC3-209ENST00000560320 LRP1Q07954 4544 aaKnown RBP6.07□□□□□ -1.44
CRTC3-209ENST00000560320 TRAV7A0A075B6U4 112 aa6.06□□□□□ -1.44
CRTC3-209ENST00000560320 hDV103S1A0JD37 113 aa6.06□□□□□ -1.44
CRTC3-209ENST00000560320 KRTAP10-8P60410 259 aa6.06□□□□□ -1.44
CRTC3-209ENST00000560320 MMP24-AS1A0A0U1RRL7 71 aa6.05□□□□□ -1.44
CRTC3-209ENST00000560320 MUC2Q02817 5179 aa6.05□□□□□ -1.44
CRTC3-209ENST00000560320 KRTAP29-1A8MX34 341 aaPredicted RBP6.04□□□□□ -1.44
CRTC3-209ENST00000560320 OXTP01178 125 aa6.04□□□□□ -1.44
CRTC3-209ENST00000560320 FAT3Q8TDW7 4589 aa6.04□□□□□ -1.44
CRTC3-209ENST00000560320 UQCRQO14949 82 aa6.03□□□□□ -1.44
CRTC3-209ENST00000560320 COX7CP15954 63 aa6.03□□□□□ -1.44
CRTC3-209ENST00000560320 LINC00313P59037 77 aa6.03□□□□□ -1.44
CRTC3-209ENST00000560320 TMEM254Q8TBM7 123 aa6.03□□□□□ -1.44
CRTC3-209ENST00000560320 MRPL34Q9BQ48 92 aaKnown RBP6.01□□□□□ -1.45
CRTC3-209ENST00000560320 NDUFS5O43920 106 aa6□□□□□ -1.45
CRTC3-209ENST00000560320 OCR1Q9BZK8 76 aa5.99□□□□□ -1.45
CRTC3-209ENST00000560320 TP53AIP1Q9HCN2 124 aa5.98□□□□□ -1.45
CRTC3-209ENST00000560320 CCDC179H3BU77 68 aa5.96□□□□□ -1.46
CRTC3-209ENST00000560320 C5orf47Q569G3 176 aa5.96□□□□□ -1.46
CRTC3-209ENST00000560320 NOTCH2NLQ7Z3S9 236 aa5.96□□□□□ -1.46
CRTC3-209ENST00000560320 MP68P56378 58 aa5.95□□□□□ -1.46
CRTC3-209ENST00000560320 FP248Q71RG6 208 aaPredicted RBP5.95□□□□□ -1.46
CRTC3-209ENST00000560320 RETNLBQ9BQ08 111 aa5.95□□□□□ -1.46
CRTC3-209ENST00000560320 TNXBP22105 4242 aa5.94□□□□□ -1.46
CRTC3-209ENST00000560320 MT1HL1P0DM35 61 aa5.94□□□□□ -1.46
CRTC3-209ENST00000560320 C20orf197Q8N268 126 aa5.94□□□□□ -1.46
CRTC3-209ENST00000560320 FSIP2Q5CZC0 6907 aa5.92□□□□□ -1.46
CRTC3-209ENST00000560320 TRAV22A0A0B4J277 110 aa5.91□□□□□ -1.46
CRTC3-209ENST00000560320 H0Y9P7 68 aa5.91□□□□□ -1.46
CRTC3-209ENST00000560320 H3BPC8 53 aa5.91□□□□□ -1.46
CRTC3-209ENST00000560320 C9orf92A6NGG3 77 aa5.89□□□□□ -1.47
CRTC3-209ENST00000560320 Q8N9P0 234 aaPredicted RBP5.89□□□□□ -1.47
CRTC3-209ENST00000560320 IGLV7-46A0A075B6I9 117 aa5.88□□□□□ -1.47
CRTC3-209ENST00000560320 KRTAP16-1A8MUX0 517 aa5.88□□□□□ -1.47
CRTC3-209ENST00000560320 NDUFC1O43677 76 aa5.88□□□□□ -1.47
CRTC3-209ENST00000560320 KLKP1Q107X0 134 aa5.88□□□□□ -1.47
CRTC3-209ENST00000560320 SNURFQ9Y675 71 aa5.88□□□□□ -1.47
CRTC3-209ENST00000560320 A0A0U1RQV1 116 aa5.87□□□□□ -1.47
CRTC3-209ENST00000560320 LINC00208Q96KT6 92 aa5.87□□□□□ -1.47
CRTC3-209ENST00000560320 PRR4Q16378 134 aa5.86□□□□□ -1.47
CRTC3-209ENST00000560320 C1orf64Q8NEQ6 169 aa5.84□□□□□ -1.47
CRTC3-209ENST00000560320 LOC101927531A0A1B0GV80 90 aa5.82□□□□□ -1.48
CRTC3-209ENST00000560320 A8MUU9 505 aa5.81□□□□□ -1.48
CRTC3-209ENST00000560320 ZCCHC13Q8WW36 166 aaKnown RBP5.81□□□□□ -1.48
CRTC3-209ENST00000560320 C20orf166-AS1Q96NR2 134 aa5.81□□□□□ -1.48
CRTC3-209ENST00000560320 TMEM258P61165 79 aa5.8□□□□□ -1.48
CRTC3-209ENST00000560320 Q5W150 140 aa5.79□□□□□ -1.48
CRTC3-209ENST00000560320 Q75L30 129 aa5.79□□□□□ -1.48
CRTC3-209ENST00000560320 H7BZZ5 65 aa5.78□□□□□ -1.48
CRTC3-209ENST00000560320 KRTAP13-3Q3SY46 172 aa5.78□□□□□ -1.48
CRTC3-209ENST00000560320 CYSTM1Q9H1C7 97 aa5.78□□□□□ -1.48
CRTC3-209ENST00000560320 ATP5EP56381 51 aaPredicted RBP5.77□□□□□ -1.49
CRTC3-209ENST00000560320 FAM236DA0A1B0GTK5 79 aa5.75□□□□□ -1.49
CRTC3-209ENST00000560320 FAM236CP0DP71 79 aa5.75□□□□□ -1.49
CRTC3-209ENST00000560320 TPRXLQ17RH7 258 aa5.75□□□□□ -1.49
CRTC3-209ENST00000560320 ATP11AUNQ6ZP68 121 aa5.75□□□□□ -1.49
CRTC3-209ENST00000560320 IGKV2D-30A0A075B6S6 120 aa5.74□□□□□ -1.49
CRTC3-209ENST00000560320 IGKV2-30P06310 120 aa5.74□□□□□ -1.49
CRTC3-209ENST00000560320 PCOTHQ58A44 107 aa5.74□□□□□ -1.49
CRTC3-209ENST00000560320 CRCT1Q9UGL9 99 aa5.74□□□□□ -1.49
CRTC3-209ENST00000560320 XP32Q5T750 250 aa5.73□□□□□ -1.49
CRTC3-209ENST00000560320 CYP4F30PQ9H0H9 118 aa5.73□□□□□ -1.49
CRTC3-209ENST00000560320 RPL37P61927 97 aaKnown RBP5.72□□□□□ -1.49
CRTC3-209ENST00000560320 C7orf65Q6ZTY9 151 aa5.72□□□□□ -1.49
CRTC3-209ENST00000560320 SPANXA2-OT1Q8N9U9 137 aa5.7□□□□□ -1.5
CRTC3-209ENST00000560320 LPAP08519 4548 aa5.69□□□□□ -1.5
CRTC3-209ENST00000560320 LCE2AQ5TA79 106 aaPredicted RBP5.68□□□□□ -1.5
CRTC3-209ENST00000560320 HRES1P13985 223 aa5.64□□□□□ -1.51
CRTC3-209ENST00000560320 SPINK7P58062 85 aa5.63□□□□□ -1.51
CRTC3-209ENST00000560320 SERP1Q9Y6X1 66 aa5.63□□□□□ -1.51
CRTC3-209ENST00000560320 SEC61BP60468 96 aaKnown RBP5.61□□□□□ -1.51
CRTC3-209ENST00000560320 RPS28P62857 69 aaKnown RBP5.59□□□□□ -1.51
CRTC3-209ENST00000560320 ACYP2P14621 99 aa5.58□□□□□ -1.52
CRTC3-209ENST00000560320 LCE2DQ5TA82 110 aaPredicted RBP5.57□□□□□ -1.52
CRTC3-209ENST00000560320 DMAC1Q96GE9 116 aa5.56□□□□□ -1.52
CRTC3-209ENST00000560320 A8MUN3 132 aa5.55□□□□□ -1.52
CRTC3-209ENST00000560320 C4orf26Q17RF5 130 aa5.55□□□□□ -1.52
CRTC3-209ENST00000560320 KRTAP9-7A8MTY7 169 aa5.54□□□□□ -1.52
CRTC3-209ENST00000560320 COA5Q86WW8 74 aa5.53□□□□□ -1.52
CRTC3-209ENST00000560320 CHKB-CPT1BH3BT56 60 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms