RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 KRTAP17-1Q9BYP8 105 aa8.3□□□□□ -1.08
ZEB1-218ENST00000560196 C1orf195Q5TG92 126 aa8.29□□□□□ -1.08
ZEB1-218ENST00000560196 A0A1B0GVX0 72 aa8.28□□□□□ -1.08
ZEB1-218ENST00000560196 SERP2Q8N6R1 65 aa8.28□□□□□ -1.08
ZEB1-218ENST00000560196 KRTAP29-1A8MX34 341 aaPredicted RBP8.27□□□□□ -1.09
ZEB1-218ENST00000560196 TRAV7A0A075B6U4 112 aa8.26□□□□□ -1.09
ZEB1-218ENST00000560196 MMP24-AS1A0A0U1RRL7 71 aa8.26□□□□□ -1.09
ZEB1-218ENST00000560196 KRTAP10-8P60410 259 aa8.26□□□□□ -1.09
ZEB1-218ENST00000560196 COX7CP15954 63 aa8.24□□□□□ -1.09
ZEB1-218ENST00000560196 C8orf17Q9NRJ1 99 aa8.24□□□□□ -1.09
ZEB1-218ENST00000560196 UQCRQO14949 82 aa8.23□□□□□ -1.09
ZEB1-218ENST00000560196 CASC2Q6XLA1 102 aa8.23□□□□□ -1.09
ZEB1-218ENST00000560196 C8orf87E5RJ46 101 aa8.22□□□□□ -1.09
ZEB1-218ENST00000560196 OCR1Q9BZK8 76 aa8.22□□□□□ -1.09
ZEB1-218ENST00000560196 IGHV6-1A0A0B4J1U7 121 aa8.21□□□□□ -1.1
ZEB1-218ENST00000560196 WFDC13Q8IUB5 93 aa8.21□□□□□ -1.1
ZEB1-218ENST00000560196 hDV103S1A0JD37 113 aa8.2□□□□□ -1.1
ZEB1-218ENST00000560196 TMEM254Q8TBM7 123 aa8.18□□□□□ -1.1
ZEB1-218ENST00000560196 KIAA1109Q2LD37 5005 aa8.17□□□□□ -1.1
ZEB1-218ENST00000560196 EPPK1P58107 5090 aaKnown RBP8.17□□□□□ -1.1
ZEB1-218ENST00000560196 CCDC179H3BU77 68 aa8.17□□□□□ -1.1
ZEB1-218ENST00000560196 NOTCH2NLQ7Z3S9 236 aa8.15□□□□□ -1.1
ZEB1-218ENST00000560196 OXTP01178 125 aa8.14□□□□□ -1.11
ZEB1-218ENST00000560196 MRPL34Q9BQ48 92 aaKnown RBP8.14□□□□□ -1.11
ZEB1-218ENST00000560196 LINC00313P59037 77 aa8.13□□□□□ -1.11
ZEB1-218ENST00000560196 MT1HL1P0DM35 61 aa8.12□□□□□ -1.11
ZEB1-218ENST00000560196 TP53AIP1Q9HCN2 124 aa8.11□□□□□ -1.11
ZEB1-218ENST00000560196 C5orf47Q569G3 176 aa8.09□□□□□ -1.11
ZEB1-218ENST00000560196 FLG2Q5D862 2391 aaPredicted RBP8.08□□□□□ -1.12
ZEB1-218ENST00000560196 FAT3Q8TDW7 4589 aa8.07□□□□□ -1.12
ZEB1-218ENST00000560196 KRTAP16-1A8MUX0 517 aa8.07□□□□□ -1.12
ZEB1-218ENST00000560196 C20orf197Q8N268 126 aa8.07□□□□□ -1.12
ZEB1-218ENST00000560196 TNXBP22105 4242 aa8.07□□□□□ -1.12
ZEB1-218ENST00000560196 KLKP1Q107X0 134 aa8.06□□□□□ -1.12
ZEB1-218ENST00000560196 Q8N9P0 234 aaPredicted RBP8.06□□□□□ -1.12
ZEB1-218ENST00000560196 KRTAP4-5Q9BYR2 181 aa8.06□□□□□ -1.12
ZEB1-218ENST00000560196 A0A0U1RQV1 116 aa8.05□□□□□ -1.12
ZEB1-218ENST00000560196 FP248Q71RG6 208 aaPredicted RBP8.04□□□□□ -1.12
ZEB1-218ENST00000560196 LRP1Q07954 4544 aaKnown RBP8.04□□□□□ -1.12
ZEB1-218ENST00000560196 H3BPC8 53 aa8.03□□□□□ -1.12
ZEB1-218ENST00000560196 NDUFS5O43920 106 aa8.02□□□□□ -1.13
ZEB1-218ENST00000560196 TRAV22A0A0B4J277 110 aa8.01□□□□□ -1.13
ZEB1-218ENST00000560196 MP68P56378 58 aa8.01□□□□□ -1.13
ZEB1-218ENST00000560196 RETNLBQ9BQ08 111 aa8.01□□□□□ -1.13
ZEB1-218ENST00000560196 H0Y9P7 68 aa8□□□□□ -1.13
ZEB1-218ENST00000560196 ZCCHC13Q8WW36 166 aaKnown RBP8□□□□□ -1.13
ZEB1-218ENST00000560196 CYSTM1Q9H1C7 97 aa7.99□□□□□ -1.13
ZEB1-218ENST00000560196 BIRC6Q9NR09 4857 aa7.99□□□□□ -1.13
ZEB1-218ENST00000560196 NDUFC1O43677 76 aa7.98□□□□□ -1.13
ZEB1-218ENST00000560196 SNURFQ9Y675 71 aa7.98□□□□□ -1.13
ZEB1-218ENST00000560196 KRTAP13-3Q3SY46 172 aa7.95□□□□□ -1.14
ZEB1-218ENST00000560196 H7BZZ5 65 aa7.94□□□□□ -1.14
ZEB1-218ENST00000560196 LINC00208Q96KT6 92 aa7.94□□□□□ -1.14
ZEB1-218ENST00000560196 DMBT1Q9UGM3 2413 aaPredicted RBP7.93□□□□□ -1.14
ZEB1-218ENST00000560196 C20orf166-AS1Q96NR2 134 aa7.93□□□□□ -1.14
ZEB1-218ENST00000560196 A8MUU9 505 aa7.92□□□□□ -1.14
ZEB1-218ENST00000560196 TMEM258P61165 79 aa7.92□□□□□ -1.14
ZEB1-218ENST00000560196 Q5W150 140 aa7.92□□□□□ -1.14
ZEB1-218ENST00000560196 C1orf64Q8NEQ6 169 aa7.92□□□□□ -1.14
ZEB1-218ENST00000560196 IGLV7-46A0A075B6I9 117 aa7.91□□□□□ -1.14
ZEB1-218ENST00000560196 C9orf92A6NGG3 77 aa7.91□□□□□ -1.14
ZEB1-218ENST00000560196 HERC2O95714 4834 aa7.91□□□□□ -1.14
ZEB1-218ENST00000560196 LOC101927531A0A1B0GV80 90 aa7.88□□□□□ -1.15
ZEB1-218ENST00000560196 MYCBP2O75592 4640 aa7.87□□□□□ -1.15
ZEB1-218ENST00000560196 Q75L30 129 aa7.86□□□□□ -1.15
ZEB1-218ENST00000560196 ATP5EP56381 51 aaPredicted RBP7.83□□□□□ -1.16
ZEB1-218ENST00000560196 FAM236DA0A1B0GTK5 79 aa7.81□□□□□ -1.16
ZEB1-218ENST00000560196 IGKV2-30P06310 120 aa7.81□□□□□ -1.16
ZEB1-218ENST00000560196 FAM236CP0DP71 79 aa7.81□□□□□ -1.16
ZEB1-218ENST00000560196 PRR4Q16378 134 aa7.81□□□□□ -1.16
ZEB1-218ENST00000560196 CYP4F30PQ9H0H9 118 aa7.8□□□□□ -1.16
ZEB1-218ENST00000560196 TPRXLQ17RH7 258 aa7.79□□□□□ -1.16
ZEB1-218ENST00000560196 SPANXA2-OT1Q8N9U9 137 aa7.79□□□□□ -1.16
ZEB1-218ENST00000560196 XP32Q5T750 250 aa7.77□□□□□ -1.17
ZEB1-218ENST00000560196 RPL37P61927 97 aaKnown RBP7.76□□□□□ -1.17
ZEB1-218ENST00000560196 ABCA13Q86UQ4 5058 aa7.74□□□□□ -1.17
ZEB1-218ENST00000560196 PCOTHQ58A44 107 aa7.74□□□□□ -1.17
ZEB1-218ENST00000560196 C7orf65Q6ZTY9 151 aa7.72□□□□□ -1.17
ZEB1-218ENST00000560196 IGKV2D-30A0A075B6S6 120 aa7.71□□□□□ -1.18
ZEB1-218ENST00000560196 ATP11AUNQ6ZP68 121 aa7.7□□□□□ -1.18
ZEB1-218ENST00000560196 RPS28P62857 69 aaKnown RBP7.69□□□□□ -1.18
ZEB1-218ENST00000560196 SERP1Q9Y6X1 66 aa7.67□□□□□ -1.18
ZEB1-218ENST00000560196 HRES1P13985 223 aa7.66□□□□□ -1.18
ZEB1-218ENST00000560196 SPINK7P58062 85 aa7.62□□□□□ -1.19
ZEB1-218ENST00000560196 DMAC1Q96GE9 116 aa7.59□□□□□ -1.19
ZEB1-218ENST00000560196 ACYP2P14621 99 aa7.54□□□□□ -1.2
ZEB1-218ENST00000560196 A8MUN3 132 aa7.53□□□□□ -1.2
ZEB1-218ENST00000560196 SEC61BP60468 96 aaKnown RBP7.52□□□□□ -1.21
ZEB1-218ENST00000560196 COA5Q86WW8 74 aa7.51□□□□□ -1.21
ZEB1-218ENST00000560196 C4orf26Q17RF5 130 aa7.5□□□□□ -1.21
ZEB1-218ENST00000560196 SMIM26A0A096LP01 95 aa7.47□□□□□ -1.21
ZEB1-218ENST00000560196 COX6B2Q6YFQ2 88 aa7.47□□□□□ -1.21
ZEB1-218ENST00000560196 PCLOQ9Y6V0 5065 aa7.47□□□□□ -1.21
ZEB1-218ENST00000560196 KRTAP3-1Q9BYR8 98 aa7.43□□□□□ -1.22
ZEB1-218ENST00000560196 LPAP08519 4548 aa7.42□□□□□ -1.22
ZEB1-218ENST00000560196 LRP2P98164 4655 aa7.42□□□□□ -1.22
ZEB1-218ENST00000560196 MPLKIPQ8TAP9 179 aa7.41□□□□□ -1.22
ZEB1-218ENST00000560196 CHKB-CPT1BH3BT56 60 aa7.38□□□□□ -1.23
ZEB1-218ENST00000560196 MUC17Q685J3 4493 aa7.37□□□□□ -1.23
ZEB1-218ENST00000560196 LOC100996750A0A140TA64 210 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms