RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 NDUFB1O75438 58 aa6.84□□□□□ -1.31
HERC1-205ENST00000559886 PRR15Q8IV56 129 aa6.84□□□□□ -1.31
HERC1-205ENST00000559886 IMUPQ9GZP8 106 aa6.84□□□□□ -1.31
HERC1-205ENST00000559886 HIST1H4AP62805 103 aaKnown RBP6.83□□□□□ -1.32
HERC1-205ENST00000559886 A0A1B0GVX0 72 aa6.83□□□□□ -1.32
HERC1-205ENST00000559886 IGHV6-1A0A0B4J1U7 121 aa6.8□□□□□ -1.32
HERC1-205ENST00000559886 FP248Q71RG6 208 aaPredicted RBP6.8□□□□□ -1.32
HERC1-205ENST00000559886 A0A087WVE0 104 aa6.79□□□□□ -1.32
HERC1-205ENST00000559886 NOTCH2NLQ7Z3S9 236 aa6.77□□□□□ -1.33
HERC1-205ENST00000559886 C8orf17Q9NRJ1 99 aa6.77□□□□□ -1.33
HERC1-205ENST00000559886 MMP24-AS1A0A0U1RRL7 71 aa6.76□□□□□ -1.33
HERC1-205ENST00000559886 C8orf87E5RJ46 101 aa6.76□□□□□ -1.33
HERC1-205ENST00000559886 HCG22E2RYF7 251 aa6.75□□□□□ -1.33
HERC1-205ENST00000559886 LINC00313P59037 77 aa6.75□□□□□ -1.33
HERC1-205ENST00000559886 IGLV7-46A0A075B6I9 117 aa6.74□□□□□ -1.33
HERC1-205ENST00000559886 PRR4Q16378 134 aa6.73□□□□□ -1.33
HERC1-205ENST00000559886 CASC2Q6XLA1 102 aa6.72□□□□□ -1.33
HERC1-205ENST00000559886 WFDC13Q8IUB5 93 aa6.72□□□□□ -1.33
HERC1-205ENST00000559886 hDV103S1A0JD37 113 aa6.72□□□□□ -1.33
HERC1-205ENST00000559886 FAM236AA0A1B0GUQ0 79 aa6.71□□□□□ -1.34
HERC1-205ENST00000559886 FAM236BA0A1B0GV22 79 aa6.71□□□□□ -1.34
HERC1-205ENST00000559886 C9orf92A6NGG3 77 aa6.7□□□□□ -1.34
HERC1-205ENST00000559886 KRTAP16-1A8MUX0 517 aa6.7□□□□□ -1.34
HERC1-205ENST00000559886 TMEM254Q8TBM7 123 aa6.69□□□□□ -1.34
HERC1-205ENST00000559886 KRTAP13-3Q3SY46 172 aa6.69□□□□□ -1.34
HERC1-205ENST00000559886 MRPL34Q9BQ48 92 aaKnown RBP6.68□□□□□ -1.34
HERC1-205ENST00000559886 TPRXLQ17RH7 258 aa6.66□□□□□ -1.34
HERC1-205ENST00000559886 SCGB1A1P11684 91 aa6.66□□□□□ -1.34
HERC1-205ENST00000559886 HERC1Q15751 4861 aa6.65□□□□□ -1.35
HERC1-205ENST00000559886 Q8N9P0 234 aaPredicted RBP6.65□□□□□ -1.35
HERC1-205ENST00000559886 ATOX1O00244 68 aa6.62□□□□□ -1.35
HERC1-205ENST00000559886 C20orf166-AS1Q96NR2 134 aa6.61□□□□□ -1.35
HERC1-205ENST00000559886 LPAP08519 4548 aa6.61□□□□□ -1.35
HERC1-205ENST00000559886 A8MUU9 505 aa6.61□□□□□ -1.35
HERC1-205ENST00000559886 NDUFS5O43920 106 aa6.61□□□□□ -1.35
HERC1-205ENST00000559886 XP32Q5T750 250 aa6.61□□□□□ -1.35
HERC1-205ENST00000559886 OCR1Q9BZK8 76 aa6.61□□□□□ -1.35
HERC1-205ENST00000559886 TP53AIP1Q9HCN2 124 aa6.59□□□□□ -1.35
HERC1-205ENST00000559886 Q75L30 129 aa6.58□□□□□ -1.36
HERC1-205ENST00000559886 SMIM20Q8N5G0 67 aa6.58□□□□□ -1.36
HERC1-205ENST00000559886 TRAV7A0A075B6U4 112 aa6.56□□□□□ -1.36
HERC1-205ENST00000559886 UQCRQO14949 82 aa6.55□□□□□ -1.36
HERC1-205ENST00000559886 RPL37P61927 97 aaKnown RBP6.55□□□□□ -1.36
HERC1-205ENST00000559886 HMCN2Q8NDA2 5059 aa6.54□□□□□ -1.36
HERC1-205ENST00000559886 LRP2P98164 4655 aa6.54□□□□□ -1.36
HERC1-205ENST00000559886 SERP2Q8N6R1 65 aa6.54□□□□□ -1.36
HERC1-205ENST00000559886 Q5W150 140 aa6.53□□□□□ -1.36
HERC1-205ENST00000559886 ANAPC13Q9BS18 74 aa6.53□□□□□ -1.36
HERC1-205ENST00000559886 ZCCHC13Q8WW36 166 aaKnown RBP6.52□□□□□ -1.37
HERC1-205ENST00000559886 TRAV22A0A0B4J277 110 aa6.51□□□□□ -1.37
HERC1-205ENST00000559886 C5orf47Q569G3 176 aa6.5□□□□□ -1.37
HERC1-205ENST00000559886 ATP11AUNQ6ZP68 121 aa6.49□□□□□ -1.37
HERC1-205ENST00000559886 H0Y9P7 68 aa6.48□□□□□ -1.37
HERC1-205ENST00000559886 COX7CP15954 63 aa6.48□□□□□ -1.37
HERC1-205ENST00000559886 MP68P56378 58 aa6.46□□□□□ -1.38
HERC1-205ENST00000559886 PCOTHQ58A44 107 aa6.44□□□□□ -1.38
HERC1-205ENST00000559886 H3BPC8 53 aa6.43□□□□□ -1.38
HERC1-205ENST00000559886 SEC61BP60468 96 aaKnown RBP6.43□□□□□ -1.38
HERC1-205ENST00000559886 LINC00208Q96KT6 92 aa6.43□□□□□ -1.38
HERC1-205ENST00000559886 C20orf197Q8N268 126 aa6.42□□□□□ -1.38
HERC1-205ENST00000559886 C1orf64Q8NEQ6 169 aa6.42□□□□□ -1.38
HERC1-205ENST00000559886 A0A0U1RQV1 116 aa6.41□□□□□ -1.38
HERC1-205ENST00000559886 LOC101927531A0A1B0GV80 90 aa6.4□□□□□ -1.38
HERC1-205ENST00000559886 MUC17Q685J3 4493 aa6.4□□□□□ -1.38
HERC1-205ENST00000559886 IGKV2-30P06310 120 aa6.4□□□□□ -1.39
HERC1-205ENST00000559886 CCDC179H3BU77 68 aa6.39□□□□□ -1.39
HERC1-205ENST00000559886 PCP4P48539 62 aa6.39□□□□□ -1.39
HERC1-205ENST00000559886 SNURFQ9Y675 71 aa6.39□□□□□ -1.39
HERC1-205ENST00000559886 KLKP1Q107X0 134 aa6.38□□□□□ -1.39
HERC1-205ENST00000559886 IGKV2D-30A0A075B6S6 120 aa6.38□□□□□ -1.39
HERC1-205ENST00000559886 CYP4F30PQ9H0H9 118 aa6.38□□□□□ -1.39
HERC1-205ENST00000559886 SPINK7P58062 85 aa6.37□□□□□ -1.39
HERC1-205ENST00000559886 C7orf65Q6ZTY9 151 aa6.37□□□□□ -1.39
HERC1-205ENST00000559886 CYSTM1Q9H1C7 97 aa6.33□□□□□ -1.4
HERC1-205ENST00000559886 KRTAP4-1Q9BYQ7 146 aa6.3□□□□□ -1.4
HERC1-205ENST00000559886 NDUFC1O43677 76 aa6.3□□□□□ -1.4
HERC1-205ENST00000559886 H7BZZ5 65 aa6.28□□□□□ -1.4
HERC1-205ENST00000559886 HRES1P13985 223 aa6.26□□□□□ -1.41
HERC1-205ENST00000559886 UBR4Q5T4S7 5183 aa6.26□□□□□ -1.41
HERC1-205ENST00000559886 C4orf26Q17RF5 130 aa6.23□□□□□ -1.41
HERC1-205ENST00000559886 MUC2Q02817 5179 aa6.23□□□□□ -1.41
HERC1-205ENST00000559886 MPLKIPQ8TAP9 179 aa6.22□□□□□ -1.41
HERC1-205ENST00000559886 SPANXA2-OT1Q8N9U9 137 aa6.21□□□□□ -1.41
HERC1-205ENST00000559886 RNF213Q63HN8 5207 aa6.19□□□□□ -1.42
HERC1-205ENST00000559886 COX6B2Q6YFQ2 88 aa6.18□□□□□ -1.42
HERC1-205ENST00000559886 RBM12B-AS1Q9P1G2 102 aa6.17□□□□□ -1.42
HERC1-205ENST00000559886 TMEM258P61165 79 aa6.17□□□□□ -1.42
HERC1-205ENST00000559886 KRTAP3-1Q9BYR8 98 aa6.16□□□□□ -1.42
HERC1-205ENST00000559886 DMAC1Q96GE9 116 aa6.15□□□□□ -1.43
HERC1-205ENST00000559886 A8MUN3 132 aa6.13□□□□□ -1.43
HERC1-205ENST00000559886 FAM236DA0A1B0GTK5 79 aa6.13□□□□□ -1.43
HERC1-205ENST00000559886 FAM236CP0DP71 79 aa6.13□□□□□ -1.43
HERC1-205ENST00000559886 ATP5EP56381 51 aaPredicted RBP6.12□□□□□ -1.43
HERC1-205ENST00000559886 KRTAP19-2Q3LHN2 52 aa6.12□□□□□ -1.43
HERC1-205ENST00000559886 ACYP2P14621 99 aa6.08□□□□□ -1.44
HERC1-205ENST00000559886 H1FX-AS1Q4G0G2 97 aa6.08□□□□□ -1.44
HERC1-205ENST00000559886 LCE2CQ5TA81 110 aa6.03□□□□□ -1.44
HERC1-205ENST00000559886 FLGP20930 4061 aaPredicted RBP6.01□□□□□ -1.45
HERC1-205ENST00000559886 COA5Q86WW8 74 aa6.01□□□□□ -1.45
HERC1-205ENST00000559886 S4R3F8 94 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms