RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 CDIP1Q9H305 208 aa4.8□□□□□ -1.64
LRRC28-215ENST00000559774 NDUFB1O75438 58 aa4.78□□□□□ -1.64
LRRC28-215ENST00000559774 Q6ZVQ6 151 aa4.78□□□□□ -1.64
LRRC28-215ENST00000559774 SIGMAR1Q99720 223 aa4.78□□□□□ -1.64
LRRC28-215ENST00000559774 LINC00846Q9NV44 126 aa4.78□□□□□ -1.64
LRRC28-215ENST00000559774 LRP2P98164 4655 aa4.77□□□□□ -1.65
LRRC28-215ENST00000559774 A8MWP4 228 aa4.77□□□□□ -1.65
LRRC28-215ENST00000559774 J3QR89 54 aa4.77□□□□□ -1.65
LRRC28-215ENST00000559774 A0A1B0GVX0 72 aa4.76□□□□□ -1.65
LRRC28-215ENST00000559774 C8orf87E5RJ46 101 aa4.76□□□□□ -1.65
LRRC28-215ENST00000559774 BPY2O14599 106 aa4.76□□□□□ -1.65
LRRC28-215ENST00000559774 DEFB116Q30KQ4 102 aa4.76□□□□□ -1.65
LRRC28-215ENST00000559774 LINC00313P59037 77 aa4.75□□□□□ -1.65
LRRC28-215ENST00000559774 LPAP08519 4548 aa4.74□□□□□ -1.65
LRRC28-215ENST00000559774 C9orf92A6NGG3 77 aa4.74□□□□□ -1.65
LRRC28-215ENST00000559774 PRR15Q8IV56 129 aa4.74□□□□□ -1.65
LRRC28-215ENST00000559774 IGHV6-1A0A0B4J1U7 121 aa4.73□□□□□ -1.65
LRRC28-215ENST00000559774 DSCR10P59022 87 aa4.73□□□□□ -1.65
LRRC28-215ENST00000559774 CXCL6P80162 114 aa4.73□□□□□ -1.65
LRRC28-215ENST00000559774 KRTAP4-8Q9BYQ9 185 aa4.73□□□□□ -1.65
LRRC28-215ENST00000559774 IGKV3D-7A0A0C4DH55 119 aa4.72□□□□□ -1.65
LRRC28-215ENST00000559774 SEC61BP60468 96 aaKnown RBP4.72□□□□□ -1.65
LRRC28-215ENST00000559774 ATP5EP2Q5VTU8 51 aa4.71□□□□□ -1.66
LRRC28-215ENST00000559774 Q75L30 129 aa4.71□□□□□ -1.66
LRRC28-215ENST00000559774 C20orf166-AS1Q96NR2 134 aa4.71□□□□□ -1.66
LRRC28-215ENST00000559774 RPL37P61927 97 aaKnown RBP4.7□□□□□ -1.66
LRRC28-215ENST00000559774 A8MUU9 505 aa4.69□□□□□ -1.66
LRRC28-215ENST00000559774 KRTAP16-1A8MUX0 517 aa4.69□□□□□ -1.66
LRRC28-215ENST00000559774 K7EQZ3 153 aa4.69□□□□□ -1.66
LRRC28-215ENST00000559774 C8orf17Q9NRJ1 99 aa4.69□□□□□ -1.66
LRRC28-215ENST00000559774 K7ERU9 68 aa4.68□□□□□ -1.66
LRRC28-215ENST00000559774 NOTCH2NLQ7Z3S9 236 aa4.68□□□□□ -1.66
LRRC28-215ENST00000559774 LINC00643Q86TS7 51 aa4.68□□□□□ -1.66
LRRC28-215ENST00000559774 TMEM254Q8TBM7 123 aa4.67□□□□□ -1.66
LRRC28-215ENST00000559774 MMP24-AS1A0A0U1RRL7 71 aa4.66□□□□□ -1.66
LRRC28-215ENST00000559774 hDV103S1A0JD37 113 aa4.66□□□□□ -1.66
LRRC28-215ENST00000559774 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.66□□□□□ -1.66
LRRC28-215ENST00000559774 ATP11AUNQ6ZP68 121 aa4.66□□□□□ -1.66
LRRC28-215ENST00000559774 Q8N9P0 234 aaPredicted RBP4.66□□□□□ -1.66
LRRC28-215ENST00000559774 KRTAP9-2Q9BYQ4 174 aa4.66□□□□□ -1.66
LRRC28-215ENST00000559774 UBR4Q5T4S7 5183 aa4.64□□□□□ -1.67
LRRC28-215ENST00000559774 MRPL34Q9BQ48 92 aaKnown RBP4.64□□□□□ -1.67
LRRC28-215ENST00000559774 MUC17Q685J3 4493 aa4.63□□□□□ -1.67
LRRC28-215ENST00000559774 HCG22E2RYF7 251 aa4.63□□□□□ -1.67
LRRC28-215ENST00000559774 PCOTHQ58A44 107 aa4.63□□□□□ -1.67
LRRC28-215ENST00000559774 CASC2Q6XLA1 102 aa4.63□□□□□ -1.67
LRRC28-215ENST00000559774 Q8N9L7 120 aa4.63□□□□□ -1.67
LRRC28-215ENST00000559774 KRTAP9-6A0A140TA67 174 aa4.62□□□□□ -1.67
LRRC28-215ENST00000559774 WFDC13Q8IUB5 93 aa4.59□□□□□ -1.67
LRRC28-215ENST00000559774 ZCCHC13Q8WW36 166 aaKnown RBP4.59□□□□□ -1.67
LRRC28-215ENST00000559774 IMUPQ9GZP8 106 aa4.59□□□□□ -1.67
LRRC28-215ENST00000559774 HIST1H4AP62805 103 aaKnown RBP4.58□□□□□ -1.68
LRRC28-215ENST00000559774 TP53AIP1Q9HCN2 124 aa4.58□□□□□ -1.68
LRRC28-215ENST00000559774 NDUFS5O43920 106 aa4.56□□□□□ -1.68
LRRC28-215ENST00000559774 A0A0U1RQV1 116 aa4.55□□□□□ -1.68
LRRC28-215ENST00000559774 KRTAP4-12Q9BQ66 201 aa4.55□□□□□ -1.68
LRRC28-215ENST00000559774 KRTAP4-1Q9BYQ7 146 aa4.54□□□□□ -1.68
LRRC28-215ENST00000559774 RNF213Q63HN8 5207 aa4.54□□□□□ -1.68
LRRC28-215ENST00000559774 MUC2Q02817 5179 aa4.54□□□□□ -1.68
LRRC28-215ENST00000559774 A0A087WVE0 104 aa4.51□□□□□ -1.69
LRRC28-215ENST00000559774 MT-ATP8P03928 68 aa4.51□□□□□ -1.69
LRRC28-215ENST00000559774 UQCRQO14949 82 aa4.5□□□□□ -1.69
LRRC28-215ENST00000559774 LCE3BQ5TA77 95 aa4.5□□□□□ -1.69
LRRC28-215ENST00000559774 SPINK7P58062 85 aa4.49□□□□□ -1.69
LRRC28-215ENST00000559774 Q5W150 140 aa4.49□□□□□ -1.69
LRRC28-215ENST00000559774 KRTAP19-1Q8IUB9 90 aa4.49□□□□□ -1.69
LRRC28-215ENST00000559774 TRAV22A0A0B4J277 110 aa4.47□□□□□ -1.69
LRRC28-215ENST00000559774 ATOX1O00244 68 aa4.47□□□□□ -1.69
LRRC28-215ENST00000559774 SCGB1A1P11684 91 aa4.47□□□□□ -1.69
LRRC28-215ENST00000559774 C7orf65Q6ZTY9 151 aa4.47□□□□□ -1.69
LRRC28-215ENST00000559774 SMIM20Q8N5G0 67 aa4.46□□□□□ -1.7
LRRC28-215ENST00000559774 MPLKIPQ8TAP9 179 aa4.46□□□□□ -1.7
LRRC28-215ENST00000559774 OCR1Q9BZK8 76 aa4.46□□□□□ -1.7
LRRC28-215ENST00000559774 HRES1P13985 223 aa4.45□□□□□ -1.7
LRRC28-215ENST00000559774 RBM12B-AS1Q9P1G2 102 aa4.45□□□□□ -1.7
LRRC28-215ENST00000559774 LOC101927531A0A1B0GV80 90 aa4.44□□□□□ -1.7
LRRC28-215ENST00000559774 IGKV2-30P06310 120 aa4.44□□□□□ -1.7
LRRC28-215ENST00000559774 C5orf47Q569G3 176 aa4.44□□□□□ -1.7
LRRC28-215ENST00000559774 IGKV2D-30A0A075B6S6 120 aa4.43□□□□□ -1.7
LRRC28-215ENST00000559774 KRTAP19-2Q3LHN2 52 aa4.43□□□□□ -1.7
LRRC28-215ENST00000559774 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
LRRC28-215ENST00000559774 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
LRRC28-215ENST00000559774 FAM236AA0A1B0GUQ0 79 aa4.42□□□□□ -1.7
LRRC28-215ENST00000559774 FAM236BA0A1B0GV22 79 aa4.42□□□□□ -1.7
LRRC28-215ENST00000559774 H3BPC8 53 aa4.42□□□□□ -1.7
LRRC28-215ENST00000559774 MP68P56378 58 aa4.42□□□□□ -1.7
LRRC28-215ENST00000559774 FAT4Q6V0I7 4981 aa4.41□□□□□ -1.7
LRRC28-215ENST00000559774 H0Y9P7 68 aa4.41□□□□□ -1.7
LRRC28-215ENST00000559774 COX6B2Q6YFQ2 88 aa4.41□□□□□ -1.7
LRRC28-215ENST00000559774 CYP4F30PQ9H0H9 118 aa4.4□□□□□ -1.71
LRRC28-215ENST00000559774 TRAV7A0A075B6U4 112 aa4.39□□□□□ -1.71
LRRC28-215ENST00000559774 FAM236DA0A1B0GTK5 79 aa4.37□□□□□ -1.71
LRRC28-215ENST00000559774 FAM236CP0DP71 79 aa4.37□□□□□ -1.71
LRRC28-215ENST00000559774 C1orf64Q8NEQ6 169 aa4.37□□□□□ -1.71
LRRC28-215ENST00000559774 LINC00208Q96KT6 92 aa4.36□□□□□ -1.71
LRRC28-215ENST00000559774 SERP2Q8N6R1 65 aa4.34□□□□□ -1.71
LRRC28-215ENST00000559774 KRTAP4-8A0A0G2JLE6 195 aa4.33□□□□□ -1.72
LRRC28-215ENST00000559774 MT1HP80294 61 aa4.33□□□□□ -1.72
LRRC28-215ENST00000559774 C4orf26Q17RF5 130 aa4.33□□□□□ -1.72
LRRC28-215ENST00000559774 H1FX-AS1Q4G0G2 97 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms