RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 MYH4Q9Y623 1939 aa-2.14□□□□□ -2.75
CASC4-210ENST00000559550 LINC00587B1AMM8 73 aa-2.14□□□□□ -2.75
CASC4-210ENST00000559550 D6R8Y8 96 aa-2.14□□□□□ -2.75
CASC4-210ENST00000559550 MUSTN1Q8IVN3 82 aa-2.14□□□□□ -2.75
CASC4-210ENST00000559550 PMCHL2Q9BQD1 86 aa-2.14□□□□□ -2.75
CASC4-210ENST00000559550 TTTY10Q9BZA0 68 aa-2.14□□□□□ -2.75
CASC4-210ENST00000559550 FAM135AQ9P2D6 1515 aa-2.14□□□□□ -2.75
CASC4-210ENST00000559550 TMEM131LA2VDJ0 1609 aa-2.14□□□□□ -2.75
CASC4-210ENST00000559550 MAGI3Q5TCQ9 1506 aa-2.15□□□□□ -2.75
CASC4-210ENST00000559550 LEPROTL1O95214 131 aa-2.15□□□□□ -2.75
CASC4-210ENST00000559550 HMGN3Q15651 99 aa-2.15□□□□□ -2.75
CASC4-210ENST00000559550 SERP2Q8N6R1 65 aa-2.15□□□□□ -2.75
CASC4-210ENST00000559550 ANKRD36BQ8N2N9 1353 aa-2.15□□□□□ -2.75
CASC4-210ENST00000559550 ZFYVE16Q7Z3T8 1539 aa-2.16□□□□□ -2.75
CASC4-210ENST00000559550 DEPDC5O75140 1603 aa-2.16□□□□□ -2.75
CASC4-210ENST00000559550 NESP48681 1621 aa-2.16□□□□□ -2.75
CASC4-210ENST00000559550 DOT1LQ8TEK3 1739 aa-2.16□□□□□ -2.75
CASC4-210ENST00000559550 ETDBQ3ZM63 59 aa-2.16□□□□□ -2.76
CASC4-210ENST00000559550 ALKAL2Q6UX46 152 aa-2.16□□□□□ -2.76
CASC4-210ENST00000559550 ATP10BO94823 1461 aa-2.16□□□□□ -2.76
CASC4-210ENST00000559550 KIF1AQ12756 1690 aa-2.16□□□□□ -2.76
CASC4-210ENST00000559550 C3orf79P0CE67 100 aa-2.17□□□□□ -2.76
CASC4-210ENST00000559550 ATOX1O00244 68 aa-2.18□□□□□ -2.76
CASC4-210ENST00000559550 WT1-ASQ06250 92 aa-2.18□□□□□ -2.76
CASC4-210ENST00000559550 VPS13AQ96RL7 3174 aa-2.18□□□□□ -2.76
CASC4-210ENST00000559550 LYNX1G3V0Z9 82 aa-2.19□□□□□ -2.76
CASC4-210ENST00000559550 IFI6P09912 130 aa-2.19□□□□□ -2.76
CASC4-210ENST00000559550 RGPD1P0DJD0 1748 aa-2.2□□□□□ -2.76
CASC4-210ENST00000559550 PPLO60437 1756 aa-2.2□□□□□ -2.76
CASC4-210ENST00000559550 C20orf202A1L168 122 aa-2.2□□□□□ -2.76
CASC4-210ENST00000559550 M0QY20 66 aa-2.2□□□□□ -2.76
CASC4-210ENST00000559550 ZNF720Q7Z2F6 126 aa-2.2□□□□□ -2.76
CASC4-210ENST00000559550 LRRIQ1Q96JM4 1722 aa-2.2□□□□□ -2.76
CASC4-210ENST00000559550 NCBP2-AS2Q69YL0 99 aa-2.21□□□□□ -2.76
CASC4-210ENST00000559550 SFTA3P0C7M3 94 aa-2.22□□□□□ -2.76
CASC4-210ENST00000559550 RPS27P42677 84 aaKnown RBP-2.22□□□□□ -2.76
CASC4-210ENST00000559550 RPS27LQ71UM5 84 aaKnown RBP-2.22□□□□□ -2.76
CASC4-210ENST00000559550 XIRP2A4UGR9 3374 aa-2.23□□□□□ -2.77
CASC4-210ENST00000559550 NOP10Q9NPE3 64 aaKnown RBP-2.23□□□□□ -2.77
CASC4-210ENST00000559550 LRRC9Q6ZRR7 1453 aa-2.23□□□□□ -2.77
CASC4-210ENST00000559550 TJP1Q07157 1748 aa-2.23□□□□□ -2.77
CASC4-210ENST00000559550 NRXN3Q9Y4C0 1643 aa-2.24□□□□□ -2.77
CASC4-210ENST00000559550 DDX60LQ5H9U9 1706 aaKnown RBP-2.24□□□□□ -2.77
CASC4-210ENST00000559550 COL5A1-AS1Q5SY13 56 aa-2.24□□□□□ -2.77
CASC4-210ENST00000559550 LRRC7Q96NW7 1537 aa-2.24□□□□□ -2.77
CASC4-210ENST00000559550 ZC3H13Q5T200 1668 aaKnown RBP-2.25□□□□□ -2.77
CASC4-210ENST00000559550 UQCRHLA0A096LP55 91 aa-2.25□□□□□ -2.77
CASC4-210ENST00000559550 ACYP1P07311 99 aa-2.25□□□□□ -2.77
CASC4-210ENST00000559550 RPL38P63173 70 aaKnown RBP-2.25□□□□□ -2.77
CASC4-210ENST00000559550 MED14O60244 1454 aa-2.26□□□□□ -2.77
CASC4-210ENST00000559550 NWD1Q149M9 1564 aa-2.26□□□□□ -2.77
CASC4-210ENST00000559550 ITSN1Q15811 1721 aa-2.26□□□□□ -2.77
CASC4-210ENST00000559550 S100A10P60903 97 aa-2.27□□□□□ -2.77
CASC4-210ENST00000559550 PLIN4Q96Q06 1357 aa-2.27□□□□□ -2.77
CASC4-210ENST00000559550 NCOA2Q15596 1464 aa-2.27□□□□□ -2.77
CASC4-210ENST00000559550 MAP3K4Q9Y6R4 1608 aa-2.28□□□□□ -2.77
CASC4-210ENST00000559550 RICTORQ6R327 1708 aa-2.28□□□□□ -2.77
CASC4-210ENST00000559550 LTN1O94822 1766 aa-2.28□□□□□ -2.77
CASC4-210ENST00000559550 S100PP25815 95 aa-2.28□□□□□ -2.77
CASC4-210ENST00000559550 FAUP35544 74 aaKnown RBP-2.28□□□□□ -2.77
CASC4-210ENST00000559550 GAFA1Q96PS6 74 aa-2.28□□□□□ -2.77
CASC4-210ENST00000559550 EEA1Q15075 1411 aa-2.28□□□□□ -2.77
CASC4-210ENST00000559550 KIF14Q15058 1648 aa-2.29□□□□□ -2.78
CASC4-210ENST00000559550 UTRNP46939 3433 aa-2.3□□□□□ -2.78
CASC4-210ENST00000559550 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.31□□□□□ -2.78
CASC4-210ENST00000559550 KIAA0586Q9BVV6 1533 aa-2.31□□□□□ -2.78
CASC4-210ENST00000559550 IQCF6A8MYZ5 107 aa-2.31□□□□□ -2.78
CASC4-210ENST00000559550 FAM208AQ9UK61 1670 aaKnown RBP-2.31□□□□□ -2.78
CASC4-210ENST00000559550 TRAV21A0A0B4J279 112 aa-2.32□□□□□ -2.78
CASC4-210ENST00000559550 A0A1B0GUT8 65 aa-2.32□□□□□ -2.78
CASC4-210ENST00000559550 CLTCQ00610 1675 aaKnown RBP-2.32□□□□□ -2.78
CASC4-210ENST00000559550 THOC2Q8NI27 1593 aaKnown RBP-2.32□□□□□ -2.78
CASC4-210ENST00000559550 BAZ1AQ9NRL2 1556 aaPredicted RBP-2.32□□□□□ -2.78
CASC4-210ENST00000559550 NEXMIFQ5QGS0 1516 aa-2.32□□□□□ -2.78
CASC4-210ENST00000559550 CLASP1Q7Z460 1538 aa-2.32□□□□□ -2.78
CASC4-210ENST00000559550 NRAPQ86VF7 1730 aa-2.33□□□□□ -2.78
CASC4-210ENST00000559550 NHSQ6T4R5 1651 aa-2.33□□□□□ -2.78
CASC4-210ENST00000559550 H3BUA1 57 aa-2.33□□□□□ -2.78
CASC4-210ENST00000559550 FCER1GP30273 86 aa-2.34□□□□□ -2.78
CASC4-210ENST00000559550 CD163L1Q9NR16 1453 aa-2.34□□□□□ -2.78
CASC4-210ENST00000559550 PREX2Q70Z35 1606 aa-2.35□□□□□ -2.78
CASC4-210ENST00000559550 LINC00032P0C843 101 aa-2.35□□□□□ -2.79
CASC4-210ENST00000559550 BVES-AS1Q5T3Y7 98 aa-2.35□□□□□ -2.79
CASC4-210ENST00000559550 MINOS1Q5TGZ0 78 aa-2.35□□□□□ -2.79
CASC4-210ENST00000559550 EPRSP07814 1512 aaKnown RBP-2.36□□□□□ -2.79
CASC4-210ENST00000559550 CRIP1P50238 77 aa-2.37□□□□□ -2.79
CASC4-210ENST00000559550 PLGLAQ15195 96 aa-2.37□□□□□ -2.79
CASC4-210ENST00000559550 C14orf144Q96I85 54 aa-2.37□□□□□ -2.79
CASC4-210ENST00000559550 DPY30Q9C005 99 aa-2.37□□□□□ -2.79
CASC4-210ENST00000559550 HMGN2P05204 90 aaKnown RBP-2.38□□□□□ -2.79
CASC4-210ENST00000559550 ARFGEF2Q9Y6D5 1785 aa-2.38□□□□□ -2.79
CASC4-210ENST00000559550 FANCAO15360 1455 aa-2.39□□□□□ -2.79
CASC4-210ENST00000559550 MYO5CQ9NQX4 1742 aa-2.39□□□□□ -2.79
CASC4-210ENST00000559550 ANKRD26Q9UPS8 1709 aa-2.39□□□□□ -2.79
CASC4-210ENST00000559550 POLR2KP53803 58 aaKnown RBP-2.39□□□□□ -2.79
CASC4-210ENST00000559550 C6orf48Q9UBA6 75 aa-2.39□□□□□ -2.79
CASC4-210ENST00000559550 KAAG1Q9UBP8 84 aa-2.39□□□□□ -2.79
CASC4-210ENST00000559550 UACAQ9BZF9 1416 aa-2.4□□□□□ -2.79
CASC4-210ENST00000559550 C20orf78Q9BR46 151 aa-2.4□□□□□ -2.79
CASC4-210ENST00000559550 DIP2BQ9P265 1576 aa-2.4□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms