RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 C8orf17Q9NRJ1 99 aa6.5□□□□□ -1.37
SPG11-217ENST00000559511 IGHV6-1A0A0B4J1U7 121 aa6.5□□□□□ -1.37
SPG11-217ENST00000559511 A0A1B0GVX0 72 aa6.5□□□□□ -1.37
SPG11-217ENST00000559511 TRAV22A0A0B4J277 110 aa6.49□□□□□ -1.37
SPG11-217ENST00000559511 FAM229BQ4G0N7 80 aa6.49□□□□□ -1.37
SPG11-217ENST00000559511 FP248Q71RG6 208 aaPredicted RBP6.49□□□□□ -1.37
SPG11-217ENST00000559511 A0A087X002 238 aa6.47□□□□□ -1.37
SPG11-217ENST00000559511 SMIM26A0A096LP01 95 aa6.47□□□□□ -1.37
SPG11-217ENST00000559511 NOTCH2NLQ7Z3S9 236 aa6.47□□□□□ -1.37
SPG11-217ENST00000559511 CDK2AP2O75956 126 aa6.47□□□□□ -1.37
SPG11-217ENST00000559511 RYR3Q15413 4870 aa6.47□□□□□ -1.37
SPG11-217ENST00000559511 PRR4Q16378 134 aa6.46□□□□□ -1.37
SPG11-217ENST00000559511 SPINK6Q6UWN8 80 aa6.46□□□□□ -1.37
SPG11-217ENST00000559511 H3BPC8 53 aa6.46□□□□□ -1.38
SPG11-217ENST00000559511 CD164Q04900 197 aa6.46□□□□□ -1.38
SPG11-217ENST00000559511 SSBP3-AS1Q7Z2R9 100 aa6.46□□□□□ -1.38
SPG11-217ENST00000559511 KRTAP13-2Q52LG2 175 aa6.45□□□□□ -1.38
SPG11-217ENST00000559511 C1orf64Q8NEQ6 169 aa6.45□□□□□ -1.38
SPG11-217ENST00000559511 A0A1B0GVY2 172 aa6.44□□□□□ -1.38
SPG11-217ENST00000559511 CYP4F30PQ9H0H9 118 aa6.43□□□□□ -1.38
SPG11-217ENST00000559511 MRPL34Q9BQ48 92 aaKnown RBP6.43□□□□□ -1.38
SPG11-217ENST00000559511 TP53AIP1Q9HCN2 124 aa6.43□□□□□ -1.38
SPG11-217ENST00000559511 NDUFS5O43920 106 aa6.42□□□□□ -1.38
SPG11-217ENST00000559511 KRTAP1-4P0C5Y4 121 aa6.41□□□□□ -1.38
SPG11-217ENST00000559511 SPANXA2-OT1Q8N9U9 137 aa6.39□□□□□ -1.39
SPG11-217ENST00000559511 MPLKIPQ8TAP9 179 aa6.38□□□□□ -1.39
SPG11-217ENST00000559511 DYNC1H1Q14204 4646 aaKnown RBP6.38□□□□□ -1.39
SPG11-217ENST00000559511 RYR2Q92736 4967 aa6.38□□□□□ -1.39
SPG11-217ENST00000559511 PCOTHQ58A44 107 aa6.36□□□□□ -1.39
SPG11-217ENST00000559511 PMAIP1Q13794 54 aa6.35□□□□□ -1.39
SPG11-217ENST00000559511 SMR3BP02814 79 aaPredicted RBP6.34□□□□□ -1.39
SPG11-217ENST00000559511 Q5W150 140 aa6.34□□□□□ -1.4
SPG11-217ENST00000559511 PLA2G1BP04054 148 aaKnown RBP6.33□□□□□ -1.4
SPG11-217ENST00000559511 APOBP04114 4563 aaKnown RBP6.33□□□□□ -1.4
SPG11-217ENST00000559511 IGLV7-46A0A075B6I9 117 aa6.32□□□□□ -1.4
SPG11-217ENST00000559511 C8orf87E5RJ46 101 aa6.32□□□□□ -1.4
SPG11-217ENST00000559511 KRTAP13-3Q3SY46 172 aa6.32□□□□□ -1.4
SPG11-217ENST00000559511 LINC00313P59037 77 aa6.31□□□□□ -1.4
SPG11-217ENST00000559511 FAT1Q14517 4588 aa6.3□□□□□ -1.4
SPG11-217ENST00000559511 TYMSOSQ8TAI1 123 aa6.29□□□□□ -1.4
SPG11-217ENST00000559511 KRTAP10-4P60372 401 aaPredicted RBP6.29□□□□□ -1.4
SPG11-217ENST00000559511 Q1T7F1 81 aa6.29□□□□□ -1.4
SPG11-217ENST00000559511 LIMD2Q9BT23 127 aa6.29□□□□□ -1.4
SPG11-217ENST00000559511 Q8N9P0 234 aaPredicted RBP6.27□□□□□ -1.41
SPG11-217ENST00000559511 LOC101927531A0A1B0GV80 90 aa6.26□□□□□ -1.41
SPG11-217ENST00000559511 KRTAP16-1A8MUX0 517 aa6.26□□□□□ -1.41
SPG11-217ENST00000559511 COA5Q86WW8 74 aa6.26□□□□□ -1.41
SPG11-217ENST00000559511 PRR26Q8N8Z3 221 aa6.26□□□□□ -1.41
SPG11-217ENST00000559511 PKHD1L1Q86WI1 4243 aa6.25□□□□□ -1.41
SPG11-217ENST00000559511 EPPK1P58107 5090 aaKnown RBP6.25□□□□□ -1.41
SPG11-217ENST00000559511 SPINK1P00995 79 aa6.25□□□□□ -1.41
SPG11-217ENST00000559511 RETNLBQ9BQ08 111 aa6.23□□□□□ -1.41
SPG11-217ENST00000559511 BRK1Q8WUW1 75 aa6.23□□□□□ -1.41
SPG11-217ENST00000559511 FAM229AH3BQW9 127 aa6.22□□□□□ -1.41
SPG11-217ENST00000559511 PSPHP1O15172 72 aa6.22□□□□□ -1.41
SPG11-217ENST00000559511 H3BS24 57 aa6.21□□□□□ -1.42
SPG11-217ENST00000559511 LINC00304Q8N9R0 145 aa6.21□□□□□ -1.42
SPG11-217ENST00000559511 KRTAP3-3Q9BYR6 98 aa6.21□□□□□ -1.42
SPG11-217ENST00000559511 KRTAP3-2Q9BYR7 98 aa6.21□□□□□ -1.42
SPG11-217ENST00000559511 HRES1P13985 223 aa6.2□□□□□ -1.42
SPG11-217ENST00000559511 A8MUN3 132 aa6.18□□□□□ -1.42
SPG11-217ENST00000559511 RPS29P62273 56 aaKnown RBP6.17□□□□□ -1.42
SPG11-217ENST00000559511 IGKV2-30P06310 120 aa6.16□□□□□ -1.42
SPG11-217ENST00000559511 SPAG11AQ6PDA7 123 aa6.16□□□□□ -1.42
SPG11-217ENST00000559511 Q5VV11 94 aa6.14□□□□□ -1.43
SPG11-217ENST00000559511 BIRC6Q9NR09 4857 aa6.13□□□□□ -1.43
SPG11-217ENST00000559511 PRR15LQ9BU68 103 aa6.12□□□□□ -1.43
SPG11-217ENST00000559511 IGKV2D-30A0A075B6S6 120 aa6.11□□□□□ -1.43
SPG11-217ENST00000559511 DMAC1Q96GE9 116 aa6.11□□□□□ -1.43
SPG11-217ENST00000559511 HSPG2P98160 4391 aa6.1□□□□□ -1.43
SPG11-217ENST00000559511 Q5VSD8 79 aa6.1□□□□□ -1.43
SPG11-217ENST00000559511 ACYP2P14621 99 aa6.1□□□□□ -1.43
SPG11-217ENST00000559511 RBM12B-AS1Q9P1G2 102 aa6.1□□□□□ -1.43
SPG11-217ENST00000559511 KRTAP17-1Q9BYP8 105 aa6.09□□□□□ -1.43
SPG11-217ENST00000559511 TNXBP22105 4242 aa6.08□□□□□ -1.44
SPG11-217ENST00000559511 LINC01558Q9Y6Z2 57 aa6.07□□□□□ -1.44
SPG11-217ENST00000559511 LRP1Q07954 4544 aaKnown RBP6.07□□□□□ -1.44
SPG11-217ENST00000559511 C9orf92A6NGG3 77 aa6.06□□□□□ -1.44
SPG11-217ENST00000559511 CHKB-CPT1BH3BT56 60 aa6.06□□□□□ -1.44
SPG11-217ENST00000559511 Q75L30 129 aa6.05□□□□□ -1.44
SPG11-217ENST00000559511 FLG2Q5D862 2391 aaPredicted RBP6.05□□□□□ -1.44
SPG11-217ENST00000559511 A8MU10 97 aa6.04□□□□□ -1.44
SPG11-217ENST00000559511 KTN1-AS1Q86SY8 53 aa6.04□□□□□ -1.44
SPG11-217ENST00000559511 Q8N1X5 172 aa6.03□□□□□ -1.44
SPG11-217ENST00000559511 RYR1P21817 5038 aa6.02□□□□□ -1.45
SPG11-217ENST00000559511 KRTAP10-8P60410 259 aa6.02□□□□□ -1.45
SPG11-217ENST00000559511 FAT3Q8TDW7 4589 aa6.02□□□□□ -1.45
SPG11-217ENST00000559511 A8MUU9 505 aa6.01□□□□□ -1.45
SPG11-217ENST00000559511 C7orf65Q6ZTY9 151 aa6.01□□□□□ -1.45
SPG11-217ENST00000559511 C20orf166-AS1Q96NR2 134 aa6.01□□□□□ -1.45
SPG11-217ENST00000559511 A6NED7 52 aa5.98□□□□□ -1.45
SPG11-217ENST00000559511 KIAA1109Q2LD37 5005 aa5.98□□□□□ -1.45
SPG11-217ENST00000559511 LCA10Q71F78 164 aa5.97□□□□□ -1.45
SPG11-217ENST00000559511 SPINK7P58062 85 aa5.95□□□□□ -1.46
SPG11-217ENST00000559511 HERC2O95714 4834 aa5.94□□□□□ -1.46
SPG11-217ENST00000559511 DMBT1Q9UGM3 2413 aaPredicted RBP5.92□□□□□ -1.46
SPG11-217ENST00000559511 MT1HL1P0DM35 61 aa5.92□□□□□ -1.46
SPG11-217ENST00000559511 CDC42SE1Q9NRR8 79 aa5.91□□□□□ -1.46
SPG11-217ENST00000559511 MYCBP2O75592 4640 aa5.91□□□□□ -1.46
SPG11-217ENST00000559511 A0A1B0GU69 56 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms