RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ASB16-AS1Q495Z4 193 aa7.48□□□□□ -1.21
SMAD3-207ENST00000558763 PRR26Q8N8Z3 221 aa7.47□□□□□ -1.21
SMAD3-207ENST00000558763 MMP24-AS1A0A0U1RRL7 71 aa7.46□□□□□ -1.21
SMAD3-207ENST00000558763 Q5XG85 94 aa7.46□□□□□ -1.21
SMAD3-207ENST00000558763 WFDC13Q8IUB5 93 aa7.46□□□□□ -1.22
SMAD3-207ENST00000558763 FAT3Q8TDW7 4589 aa7.45□□□□□ -1.22
SMAD3-207ENST00000558763 C20orf197Q8N268 126 aa7.43□□□□□ -1.22
SMAD3-207ENST00000558763 A0A1B0GVX0 72 aa7.42□□□□□ -1.22
SMAD3-207ENST00000558763 TYMSOSQ8TAI1 123 aa7.42□□□□□ -1.22
SMAD3-207ENST00000558763 CASC2Q6XLA1 102 aa7.42□□□□□ -1.22
SMAD3-207ENST00000558763 NDUFB1O75438 58 aa7.41□□□□□ -1.22
SMAD3-207ENST00000558763 KLKP1Q107X0 134 aa7.4□□□□□ -1.22
SMAD3-207ENST00000558763 NOTCH2NLQ7Z3S9 236 aa7.4□□□□□ -1.22
SMAD3-207ENST00000558763 C8orf17Q9NRJ1 99 aa7.4□□□□□ -1.22
SMAD3-207ENST00000558763 TNXBP22105 4242 aa7.4□□□□□ -1.22
SMAD3-207ENST00000558763 C1orf195Q5TG92 126 aa7.4□□□□□ -1.23
SMAD3-207ENST00000558763 IGHV6-1A0A0B4J1U7 121 aa7.39□□□□□ -1.23
SMAD3-207ENST00000558763 PCLOQ9Y6V0 5065 aa7.38□□□□□ -1.23
SMAD3-207ENST00000558763 TMEM254Q8TBM7 123 aa7.38□□□□□ -1.23
SMAD3-207ENST00000558763 hDV103S1A0JD37 113 aa7.37□□□□□ -1.23
SMAD3-207ENST00000558763 SNURFQ9Y675 71 aa7.37□□□□□ -1.23
SMAD3-207ENST00000558763 A0A0U1RQV1 116 aa7.37□□□□□ -1.23
SMAD3-207ENST00000558763 SPINK1P00995 79 aa7.36□□□□□ -1.23
SMAD3-207ENST00000558763 H7BZZ5 65 aa7.35□□□□□ -1.23
SMAD3-207ENST00000558763 OXTP01178 125 aa7.35□□□□□ -1.23
SMAD3-207ENST00000558763 KRTAP10-8P60410 259 aa7.35□□□□□ -1.23
SMAD3-207ENST00000558763 LINC00304Q8N9R0 145 aa7.35□□□□□ -1.23
SMAD3-207ENST00000558763 LIMD2Q9BT23 127 aa7.35□□□□□ -1.23
SMAD3-207ENST00000558763 MT1HL1P0DM35 61 aa7.34□□□□□ -1.23
SMAD3-207ENST00000558763 RPS29P62273 56 aaKnown RBP7.33□□□□□ -1.24
SMAD3-207ENST00000558763 C4orf48Q5BLP8 95 aa7.33□□□□□ -1.24
SMAD3-207ENST00000558763 ZCCHC13Q8WW36 166 aaKnown RBP7.32□□□□□ -1.24
SMAD3-207ENST00000558763 SPAG11AQ6PDA7 123 aa7.31□□□□□ -1.24
SMAD3-207ENST00000558763 MRPL34Q9BQ48 92 aaKnown RBP7.3□□□□□ -1.24
SMAD3-207ENST00000558763 TMEM258P61165 79 aa7.29□□□□□ -1.24
SMAD3-207ENST00000558763 C5orf47Q569G3 176 aa7.29□□□□□ -1.24
SMAD3-207ENST00000558763 J3QL48 77 aa7.29□□□□□ -1.24
SMAD3-207ENST00000558763 C8orf87E5RJ46 101 aa7.28□□□□□ -1.24
SMAD3-207ENST00000558763 DMBT1Q9UGM3 2413 aaPredicted RBP7.27□□□□□ -1.25
SMAD3-207ENST00000558763 KRTAP16-1A8MUX0 517 aa7.26□□□□□ -1.25
SMAD3-207ENST00000558763 NDUFC1O43677 76 aa7.25□□□□□ -1.25
SMAD3-207ENST00000558763 H0Y9P7 68 aa7.24□□□□□ -1.25
SMAD3-207ENST00000558763 TP53AIP1Q9HCN2 124 aa7.24□□□□□ -1.25
SMAD3-207ENST00000558763 TRAV22A0A0B4J277 110 aa7.24□□□□□ -1.25
SMAD3-207ENST00000558763 LINC00313P59037 77 aa7.24□□□□□ -1.25
SMAD3-207ENST00000558763 KRTAP13-3Q3SY46 172 aa7.22□□□□□ -1.25
SMAD3-207ENST00000558763 MP68P56378 58 aa7.22□□□□□ -1.25
SMAD3-207ENST00000558763 Q8N9P0 234 aaPredicted RBP7.22□□□□□ -1.25
SMAD3-207ENST00000558763 LINC00208Q96KT6 92 aa7.21□□□□□ -1.26
SMAD3-207ENST00000558763 NDUFS5O43920 106 aa7.2□□□□□ -1.26
SMAD3-207ENST00000558763 FAM236DA0A1B0GTK5 79 aa7.2□□□□□ -1.26
SMAD3-207ENST00000558763 H3BPC8 53 aa7.2□□□□□ -1.26
SMAD3-207ENST00000558763 FAM236CP0DP71 79 aa7.2□□□□□ -1.26
SMAD3-207ENST00000558763 Q5W150 140 aa7.2□□□□□ -1.26
SMAD3-207ENST00000558763 RETNLBQ9BQ08 111 aa7.19□□□□□ -1.26
SMAD3-207ENST00000558763 C1orf64Q8NEQ6 169 aa7.17□□□□□ -1.26
SMAD3-207ENST00000558763 HERC1Q15751 4861 aa7.14□□□□□ -1.27
SMAD3-207ENST00000558763 ATP5EP56381 51 aaPredicted RBP7.11□□□□□ -1.27
SMAD3-207ENST00000558763 RPS28P62857 69 aaKnown RBP7.11□□□□□ -1.27
SMAD3-207ENST00000558763 PRR4Q16378 134 aa7.08□□□□□ -1.28
SMAD3-207ENST00000558763 LOC101927531A0A1B0GV80 90 aa7.06□□□□□ -1.28
SMAD3-207ENST00000558763 C9orf92A6NGG3 77 aa7.06□□□□□ -1.28
SMAD3-207ENST00000558763 SPANXA2-OT1Q8N9U9 137 aa7.06□□□□□ -1.28
SMAD3-207ENST00000558763 SERP1Q9Y6X1 66 aa7.06□□□□□ -1.28
SMAD3-207ENST00000558763 CYP4F30PQ9H0H9 118 aa7.06□□□□□ -1.28
SMAD3-207ENST00000558763 C20orf166-AS1Q96NR2 134 aa7.05□□□□□ -1.28
SMAD3-207ENST00000558763 PCOTHQ58A44 107 aa7.04□□□□□ -1.28
SMAD3-207ENST00000558763 A8MUU9 505 aa7.04□□□□□ -1.28
SMAD3-207ENST00000558763 IGLV7-46A0A075B6I9 117 aa7.03□□□□□ -1.28
SMAD3-207ENST00000558763 FP248Q71RG6 208 aaPredicted RBP7.03□□□□□ -1.28
SMAD3-207ENST00000558763 IGKV2-30P06310 120 aa7.02□□□□□ -1.29
SMAD3-207ENST00000558763 LPAP08519 4548 aa6.98□□□□□ -1.29
SMAD3-207ENST00000558763 HMCN2Q8NDA2 5059 aa6.97□□□□□ -1.29
SMAD3-207ENST00000558763 HRES1P13985 223 aa6.94□□□□□ -1.3
SMAD3-207ENST00000558763 Q75L30 129 aa6.94□□□□□ -1.3
SMAD3-207ENST00000558763 IGKV2D-30A0A075B6S6 120 aa6.93□□□□□ -1.3
SMAD3-207ENST00000558763 TPRXLQ17RH7 258 aa6.93□□□□□ -1.3
SMAD3-207ENST00000558763 XP32Q5T750 250 aa6.89□□□□□ -1.31
SMAD3-207ENST00000558763 LRP2P98164 4655 aa6.89□□□□□ -1.31
SMAD3-207ENST00000558763 SMIM26A0A096LP01 95 aa6.88□□□□□ -1.31
SMAD3-207ENST00000558763 C7orf65Q6ZTY9 151 aa6.88□□□□□ -1.31
SMAD3-207ENST00000558763 COA5Q86WW8 74 aa6.87□□□□□ -1.31
SMAD3-207ENST00000558763 DMAC1Q96GE9 116 aa6.86□□□□□ -1.31
SMAD3-207ENST00000558763 RPL37P61927 97 aaKnown RBP6.86□□□□□ -1.31
SMAD3-207ENST00000558763 SPINK7P58062 85 aa6.8□□□□□ -1.32
SMAD3-207ENST00000558763 C4orf26Q17RF5 130 aa6.78□□□□□ -1.32
SMAD3-207ENST00000558763 ACYP2P14621 99 aa6.77□□□□□ -1.33
SMAD3-207ENST00000558763 ATP11AUNQ6ZP68 121 aa6.77□□□□□ -1.33
SMAD3-207ENST00000558763 MPLKIPQ8TAP9 179 aa6.76□□□□□ -1.33
SMAD3-207ENST00000558763 Q1T7F1 81 aa6.75□□□□□ -1.33
SMAD3-207ENST00000558763 KRTAP3-1Q9BYR8 98 aa6.75□□□□□ -1.33
SMAD3-207ENST00000558763 UBR4Q5T4S7 5183 aa6.74□□□□□ -1.33
SMAD3-207ENST00000558763 A8MUN3 132 aa6.69□□□□□ -1.34
SMAD3-207ENST00000558763 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
SMAD3-207ENST00000558763 MUC17Q685J3 4493 aa6.68□□□□□ -1.34
SMAD3-207ENST00000558763 COX6B2Q6YFQ2 88 aa6.66□□□□□ -1.34
SMAD3-207ENST00000558763 MUC2Q02817 5179 aa6.64□□□□□ -1.35
SMAD3-207ENST00000558763 CHKB-CPT1BH3BT56 60 aa6.64□□□□□ -1.35
SMAD3-207ENST00000558763 V9GYY9 64 aa6.64□□□□□ -1.35
SMAD3-207ENST00000558763 LINC01558Q9Y6Z2 57 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms