RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 UBE2V1Q13404 147 aa7.8□□□□□ -1.16
TPM1-211ENST00000558314 LINC00472Q9H8W2 130 aa7.79□□□□□ -1.16
TPM1-211ENST00000558314 C9orf118A6NHY6 69 aa7.78□□□□□ -1.16
TPM1-211ENST00000558314 NAA38Q9BRA0 125 aaKnown RBP7.78□□□□□ -1.16
TPM1-211ENST00000558314 MT2AP02795 61 aa7.76□□□□□ -1.17
TPM1-211ENST00000558314 HRES1P13985 223 aa7.76□□□□□ -1.17
TPM1-211ENST00000558314 COL5A1-AS1Q5SY13 56 aa7.76□□□□□ -1.17
TPM1-211ENST00000558314 USH2AO75445 5202 aa7.75□□□□□ -1.17
TPM1-211ENST00000558314 BAALC-AS2P0C853 105 aa7.75□□□□□ -1.17
TPM1-211ENST00000558314 A0A1W2PPM0 123 aa7.74□□□□□ -1.17
TPM1-211ENST00000558314 TAX1BP3O14907 124 aa7.74□□□□□ -1.17
TPM1-211ENST00000558314 SSPOA2VEC9 5147 aa7.73□□□□□ -1.17
TPM1-211ENST00000558314 A0A1B0GVX0 72 aa7.73□□□□□ -1.17
TPM1-211ENST00000558314 RBM3P98179 157 aaKnown RBP7.73□□□□□ -1.17
TPM1-211ENST00000558314 DSCR8Q96T75 97 aa7.73□□□□□ -1.17
TPM1-211ENST00000558314 C8orf87E5RJ46 101 aa7.72□□□□□ -1.17
TPM1-211ENST00000558314 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.71□□□□□ -1.18
TPM1-211ENST00000558314 KRTAP10-10P60014 251 aa7.71□□□□□ -1.18
TPM1-211ENST00000558314 PCP4L1A6NKN8 68 aa7.7□□□□□ -1.18
TPM1-211ENST00000558314 JMJD7-PLA2G4BH0Y9G9 81 aa7.7□□□□□ -1.18
TPM1-211ENST00000558314 MT1FP04733 61 aa7.7□□□□□ -1.18
TPM1-211ENST00000558314 C21orf62-AS1Q17RA5 79 aa7.7□□□□□ -1.18
TPM1-211ENST00000558314 MPLKIPQ8TAP9 179 aa7.7□□□□□ -1.18
TPM1-211ENST00000558314 KRTAP9-7A8MTY7 169 aa7.68□□□□□ -1.18
TPM1-211ENST00000558314 C9JAW5 83 aa7.68□□□□□ -1.18
TPM1-211ENST00000558314 MTURNQ8N3F0 131 aa7.68□□□□□ -1.18
TPM1-211ENST00000558314 PDE6GP18545 87 aa7.67□□□□□ -1.18
TPM1-211ENST00000558314 ZCCHC13Q8WW36 166 aaKnown RBP7.67□□□□□ -1.18
TPM1-211ENST00000558314 H3BT86 120 aa7.66□□□□□ -1.18
TPM1-211ENST00000558314 SPCS1Q9Y6A9 102 aa7.66□□□□□ -1.18
TPM1-211ENST00000558314 SPINK7P58062 85 aa7.65□□□□□ -1.18
TPM1-211ENST00000558314 J3KT08 172 aa7.64□□□□□ -1.19
TPM1-211ENST00000558314 NDUFB1O75438 58 aa7.64□□□□□ -1.19
TPM1-211ENST00000558314 LCE2BO14633 110 aa7.63□□□□□ -1.19
TPM1-211ENST00000558314 A0A1B0GW54 56 aa7.62□□□□□ -1.19
TPM1-211ENST00000558314 LOC110117498A0A087WWA1 95 aa7.61□□□□□ -1.19
TPM1-211ENST00000558314 Q6ZQT0 140 aa7.61□□□□□ -1.19
TPM1-211ENST00000558314 KRTAP19-1Q8IUB9 90 aa7.6□□□□□ -1.19
TPM1-211ENST00000558314 KRTAP9-3Q9BYQ3 159 aa7.6□□□□□ -1.19
TPM1-211ENST00000558314 GTF2H5Q6ZYL4 71 aa7.59□□□□□ -1.19
TPM1-211ENST00000558314 K7EP34 96 aa7.58□□□□□ -1.2
TPM1-211ENST00000558314 WFDC13Q8IUB5 93 aa7.58□□□□□ -1.2
TPM1-211ENST00000558314 C8orf17Q9NRJ1 99 aa7.58□□□□□ -1.2
TPM1-211ENST00000558314 C14orf132Q9NPU4 83 aa7.56□□□□□ -1.2
TPM1-211ENST00000558314 Q8N9P0 234 aaPredicted RBP7.55□□□□□ -1.2
TPM1-211ENST00000558314 FCGBPQ9Y6R7 5405 aaPredicted RBP7.55□□□□□ -1.2
TPM1-211ENST00000558314 A8MWP4 228 aa7.54□□□□□ -1.2
TPM1-211ENST00000558314 IGKV3D-7A0A0C4DH55 119 aa7.53□□□□□ -1.2
TPM1-211ENST00000558314 Q6ZVQ6 151 aa7.52□□□□□ -1.21
TPM1-211ENST00000558314 F8W1H4 67 aa7.49□□□□□ -1.21
TPM1-211ENST00000558314 NREPQ16612 68 aa7.49□□□□□ -1.21
TPM1-211ENST00000558314 NDUFS5O43920 106 aa7.47□□□□□ -1.21
TPM1-211ENST00000558314 PRO0461Q9UI25 63 aa7.47□□□□□ -1.21
TPM1-211ENST00000558314 PRR15Q8IV56 129 aa7.46□□□□□ -1.22
TPM1-211ENST00000558314 SMCPP49901 116 aaPredicted RBP7.45□□□□□ -1.22
TPM1-211ENST00000558314 MRPL34Q9BQ48 92 aaKnown RBP7.44□□□□□ -1.22
TPM1-211ENST00000558314 LINC00846Q9NV44 126 aa7.44□□□□□ -1.22
TPM1-211ENST00000558314 MMP24-AS1A0A0U1RRL7 71 aa7.42□□□□□ -1.22
TPM1-211ENST00000558314 TMEM254Q8TBM7 123 aa7.42□□□□□ -1.22
TPM1-211ENST00000558314 hDV103S1A0JD37 113 aa7.4□□□□□ -1.22
TPM1-211ENST00000558314 IGKV2D-30A0A075B6S6 120 aa7.39□□□□□ -1.23
TPM1-211ENST00000558314 K7EQZ3 153 aa7.39□□□□□ -1.23
TPM1-211ENST00000558314 IGKV2-30P06310 120 aa7.39□□□□□ -1.23
TPM1-211ENST00000558314 MACF1Q9UPN3 7388 aaKnown RBP7.39□□□□□ -1.23
TPM1-211ENST00000558314 H1FX-AS1Q4G0G2 97 aa7.38□□□□□ -1.23
TPM1-211ENST00000558314 ETDBQ3ZM63 59 aa7.36□□□□□ -1.23
TPM1-211ENST00000558314 UBL5Q9BZL1 73 aa7.36□□□□□ -1.23
TPM1-211ENST00000558314 SYNE2Q8WXH0 6885 aaKnown RBP7.36□□□□□ -1.23
TPM1-211ENST00000558314 BPY2O14599 106 aa7.35□□□□□ -1.23
TPM1-211ENST00000558314 KRTAP19-6Q3LI70 58 aa7.35□□□□□ -1.23
TPM1-211ENST00000558314 C7orf65Q6ZTY9 151 aa7.3□□□□□ -1.24
TPM1-211ENST00000558314 Q5W150 140 aa7.29□□□□□ -1.24
TPM1-211ENST00000558314 Q8N9L7 120 aa7.29□□□□□ -1.24
TPM1-211ENST00000558314 A0A1B0GV90 55 aa7.27□□□□□ -1.25
TPM1-211ENST00000558314 HCG22E2RYF7 251 aa7.27□□□□□ -1.25
TPM1-211ENST00000558314 ACYP1P07311 99 aa7.27□□□□□ -1.25
TPM1-211ENST00000558314 CASC2Q6XLA1 102 aa7.26□□□□□ -1.25
TPM1-211ENST00000558314 C4orf26Q17RF5 130 aa7.25□□□□□ -1.25
TPM1-211ENST00000558314 FAM240AA0A1B0GVK7 77 aa7.23□□□□□ -1.25
TPM1-211ENST00000558314 C5orf47Q569G3 176 aa7.21□□□□□ -1.26
TPM1-211ENST00000558314 FAM236AA0A1B0GUQ0 79 aa7.2□□□□□ -1.26
TPM1-211ENST00000558314 FAM236BA0A1B0GV22 79 aa7.2□□□□□ -1.26
TPM1-211ENST00000558314 CXCL6P80162 114 aa7.2□□□□□ -1.26
TPM1-211ENST00000558314 ATP5EP2Q5VTU8 51 aa7.17□□□□□ -1.26
TPM1-211ENST00000558314 J3QR89 54 aa7.16□□□□□ -1.26
TPM1-211ENST00000558314 KRTAP6-3Q3LI67 103 aa7.12□□□□□ -1.27
TPM1-211ENST00000558314 S4R3F8 94 aa7.11□□□□□ -1.27
TPM1-211ENST00000558314 LINC00643Q86TS7 51 aa7.08□□□□□ -1.28
TPM1-211ENST00000558314 C1orf64Q8NEQ6 169 aa7.08□□□□□ -1.28
TPM1-211ENST00000558314 CSAG1Q6PB30 78 aa7.06□□□□□ -1.28
TPM1-211ENST00000558314 KRTAP3-1Q9BYR8 98 aa7.06□□□□□ -1.28
TPM1-211ENST00000558314 A6NN06 94 aa7.05□□□□□ -1.28
TPM1-211ENST00000558314 TP53AIP1Q9HCN2 124 aa7.05□□□□□ -1.28
TPM1-211ENST00000558314 LCA10Q71F78 164 aa7.04□□□□□ -1.28
TPM1-211ENST00000558314 HIST1H4AP62805 103 aaKnown RBP7.03□□□□□ -1.28
TPM1-211ENST00000558314 Q5VV11 94 aa7.03□□□□□ -1.28
TPM1-211ENST00000558314 MT1BP07438 61 aa6.99□□□□□ -1.29
TPM1-211ENST00000558314 K7ERU9 68 aa6.98□□□□□ -1.29
TPM1-211ENST00000558314 SPRR2GQ9BYE4 73 aa6.93□□□□□ -1.3
TPM1-211ENST00000558314 KLKP1Q107X0 134 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms