RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 PLAC8Q9NZF1 115 aa7.06□□□□□ -1.28
CSPG4P12-201ENST00000558282 KRTAP4-16G5E9R7 235 aaPredicted RBP7.05□□□□□ -1.28
CSPG4P12-201ENST00000558282 ADM2Q7Z4H4 148 aa7.03□□□□□ -1.28
CSPG4P12-201ENST00000558282 NDUFAF8A1L188 74 aa7.02□□□□□ -1.29
CSPG4P12-201ENST00000558282 Q6ZSA8 131 aa7.02□□□□□ -1.29
CSPG4P12-201ENST00000558282 DCHS2Q6V1P9 2916 aa7.02□□□□□ -1.29
CSPG4P12-201ENST00000558282 ZANQ9Y493 2812 aa7.01□□□□□ -1.29
CSPG4P12-201ENST00000558282 R4GN34 69 aa7□□□□□ -1.29
CSPG4P12-201ENST00000558282 PANO1I0J062 215 aa6.99□□□□□ -1.29
CSPG4P12-201ENST00000558282 A8MU10 97 aa6.99□□□□□ -1.29
CSPG4P12-201ENST00000558282 KRTAP1-1Q07627 177 aa6.98□□□□□ -1.29
CSPG4P12-201ENST00000558282 APCP25054 2843 aa6.98□□□□□ -1.29
CSPG4P12-201ENST00000558282 J3QL48 77 aa6.98□□□□□ -1.29
CSPG4P12-201ENST00000558282 NIPBLQ6KC79 2804 aaeCLIP6.96□□□□□ -1.3
CSPG4P12-201ENST00000558282 HIVEP1P15822 2718 aa6.95□□□□□ -1.3
CSPG4P12-201ENST00000558282 NSD1Q96L73 2696 aaPredicted RBP6.94□□□□□ -1.3
CSPG4P12-201ENST00000558282 SMR3BP02814 79 aaPredicted RBP6.94□□□□□ -1.3
CSPG4P12-201ENST00000558282 TENM4Q6N022 2769 aa6.91□□□□□ -1.3
CSPG4P12-201ENST00000558282 KMT2BQ9UMN6 2715 aaPredicted RBP6.9□□□□□ -1.31
CSPG4P12-201ENST00000558282 STAB2Q8WWQ8 2551 aa6.86□□□□□ -1.31
CSPG4P12-201ENST00000558282 M0QZ58 72 aa6.86□□□□□ -1.31
CSPG4P12-201ENST00000558282 A8MUU9 505 aa6.85□□□□□ -1.31
CSPG4P12-201ENST00000558282 KRTAP11-1Q8IUC1 163 aa6.84□□□□□ -1.31
CSPG4P12-201ENST00000558282 NF1P21359 2839 aa6.84□□□□□ -1.31
CSPG4P12-201ENST00000558282 PLAC4Q8WY50 150 aa6.84□□□□□ -1.32
CSPG4P12-201ENST00000558282 HRNRQ86YZ3 2850 aaPredicted RBP6.83□□□□□ -1.32
CSPG4P12-201ENST00000558282 DMBT1Q9UGM3 2413 aaPredicted RBP6.82□□□□□ -1.32
CSPG4P12-201ENST00000558282 C20orf166-AS1Q96NR2 134 aa6.81□□□□□ -1.32
CSPG4P12-201ENST00000558282 NOTCH2NLQ7Z3S9 236 aa6.8□□□□□ -1.32
CSPG4P12-201ENST00000558282 CSMD1Q96PZ7 3565 aa6.8□□□□□ -1.32
CSPG4P12-201ENST00000558282 FLG2Q5D862 2391 aaPredicted RBP6.79□□□□□ -1.32
CSPG4P12-201ENST00000558282 SPENQ96T58 3664 aaKnown RBP6.79□□□□□ -1.32
CSPG4P12-201ENST00000558282 ZFHX3Q15911 3703 aa6.78□□□□□ -1.32
CSPG4P12-201ENST00000558282 CELSR1Q9NYQ6 3014 aa6.78□□□□□ -1.32
CSPG4P12-201ENST00000558282 FBN2P35556 2912 aa6.77□□□□□ -1.33
CSPG4P12-201ENST00000558282 NBPF19A0A087WUL8 3843 aa6.76□□□□□ -1.33
CSPG4P12-201ENST00000558282 KRTAP1-5Q9BYS1 174 aa6.73□□□□□ -1.33
CSPG4P12-201ENST00000558282 CSMD2Q7Z408 3487 aa6.72□□□□□ -1.33
CSPG4P12-201ENST00000558282 RPS29P62273 56 aaKnown RBP6.7□□□□□ -1.34
CSPG4P12-201ENST00000558282 SVEP1Q4LDE5 3571 aa6.69□□□□□ -1.34
CSPG4P12-201ENST00000558282 OTOGQ6ZRI0 2925 aa6.69□□□□□ -1.34
CSPG4P12-201ENST00000558282 BSNQ9UPA5 3926 aa6.66□□□□□ -1.34
CSPG4P12-201ENST00000558282 MXRA5Q9NR99 2828 aa6.65□□□□□ -1.34
CSPG4P12-201ENST00000558282 KRTAP7-1Q8IUC3 87 aa6.61□□□□□ -1.35
CSPG4P12-201ENST00000558282 PP632Q6XCG6 107 aa6.61□□□□□ -1.35
CSPG4P12-201ENST00000558282 KRTAP13-1Q8IUC0 172 aa6.6□□□□□ -1.35
CSPG4P12-201ENST00000558282 M0R2T5 61 aa6.6□□□□□ -1.35
CSPG4P12-201ENST00000558282 PDZD2O15018 2839 aa6.59□□□□□ -1.35
CSPG4P12-201ENST00000558282 CUBNO60494 3623 aa6.58□□□□□ -1.36
CSPG4P12-201ENST00000558282 P0C880 135 aa6.55□□□□□ -1.36
CSPG4P12-201ENST00000558282 KRTAP10-1P60331 282 aa6.53□□□□□ -1.36
CSPG4P12-201ENST00000558282 C10orf95Q9H7T3 257 aa6.51□□□□□ -1.37
CSPG4P12-201ENST00000558282 TNP1P09430 55 aa6.5□□□□□ -1.37
CSPG4P12-201ENST00000558282 H0YAA0 97 aa6.5□□□□□ -1.37
CSPG4P12-201ENST00000558282 FBN1P35555 2871 aaKnown RBP6.48□□□□□ -1.37
CSPG4P12-201ENST00000558282 KRTAP10-2P60368 255 aa6.47□□□□□ -1.37
CSPG4P12-201ENST00000558282 TENM1Q9UKZ4 2725 aa6.47□□□□□ -1.37
CSPG4P12-201ENST00000558282 KRTAP13-2Q52LG2 175 aa6.44□□□□□ -1.38
CSPG4P12-201ENST00000558282 Q6ZRN7 208 aaPredicted RBP6.42□□□□□ -1.38
CSPG4P12-201ENST00000558282 VPS13CQ709C8 3753 aa6.39□□□□□ -1.39
CSPG4P12-201ENST00000558282 Q5VSD8 79 aa6.37□□□□□ -1.39
CSPG4P12-201ENST00000558282 VWFP04275 2813 aa6.35□□□□□ -1.39
CSPG4P12-201ENST00000558282 TENM3Q9P273 2699 aa6.33□□□□□ -1.4
CSPG4P12-201ENST00000558282 TGP01266 2768 aa6.29□□□□□ -1.4
CSPG4P12-201ENST00000558282 PKD1L1Q8TDX9 2849 aa6.29□□□□□ -1.4
CSPG4P12-201ENST00000558282 ZNF469Q96JG9 3925 aaPredicted RBP6.28□□□□□ -1.4
CSPG4P12-201ENST00000558282 KRTAP21-3Q3LHN1 58 aa6.26□□□□□ -1.41
CSPG4P12-201ENST00000558282 KRTAP10-8P60410 259 aa6.24□□□□□ -1.41
CSPG4P12-201ENST00000558282 TRRAPQ9Y4A5 3859 aa6.19□□□□□ -1.42
CSPG4P12-201ENST00000558282 KRTAP13-3Q3SY46 172 aa6.17□□□□□ -1.42
CSPG4P12-201ENST00000558282 ANK3Q12955 4377 aaKnown RBP6.09□□□□□ -1.44
CSPG4P12-201ENST00000558282 KRTAP1-4P0C5Y4 121 aa6.08□□□□□ -1.44
CSPG4P12-201ENST00000558282 TENM2Q9NT68 2774 aa6.06□□□□□ -1.44
CSPG4P12-201ENST00000558282 TPRXLQ17RH7 258 aa6.05□□□□□ -1.44
CSPG4P12-201ENST00000558282 AKAP9Q99996 3911 aa6.04□□□□□ -1.44
CSPG4P12-201ENST00000558282 SRRM2Q9UQ35 2752 aaKnown RBP6.03□□□□□ -1.44
CSPG4P12-201ENST00000558282 XP32Q5T750 250 aa6.02□□□□□ -1.45
CSPG4P12-201ENST00000558282 KRTAP12-2P59991 146 aa5.97□□□□□ -1.45
CSPG4P12-201ENST00000558282 FBN3Q75N90 2809 aa5.95□□□□□ -1.46
CSPG4P12-201ENST00000558282 KRTAP13-4Q3LI77 160 aa5.94□□□□□ -1.46
CSPG4P12-201ENST00000558282 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
CSPG4P12-201ENST00000558282 KRTAP12-1P59990 96 aa5.9□□□□□ -1.46
CSPG4P12-201ENST00000558282 INE1O15225 51 aa5.9□□□□□ -1.47
CSPG4P12-201ENST00000558282 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
CSPG4P12-201ENST00000558282 DNHD1Q96M86 4753 aa5.85□□□□□ -1.47
CSPG4P12-201ENST00000558282 MEGF8Q7Z7M0 2845 aa5.83□□□□□ -1.48
CSPG4P12-201ENST00000558282 COL7A1Q02388 2944 aa5.81□□□□□ -1.48
CSPG4P12-201ENST00000558282 PRO2289Q9P1D8 64 aa5.8□□□□□ -1.48
CSPG4P12-201ENST00000558282 KRTAP3-1Q9BYR8 98 aa5.73□□□□□ -1.49
CSPG4P12-201ENST00000558282 A0A1B0GVY2 172 aa5.7□□□□□ -1.5
CSPG4P12-201ENST00000558282 KRTAP10-6P60371 365 aaPredicted RBP5.69□□□□□ -1.5
CSPG4P12-201ENST00000558282 KRTAP10-10P60014 251 aa5.64□□□□□ -1.51
CSPG4P12-201ENST00000558282 CSMD3Q7Z407 3707 aa5.52□□□□□ -1.53
CSPG4P12-201ENST00000558282 PRKDCP78527 4128 aaKnown RBP5.49□□□□□ -1.53
CSPG4P12-201ENST00000558282 HUWE1Q7Z6Z7 4374 aaKnown RBP5.46□□□□□ -1.53
CSPG4P12-201ENST00000558282 KRTAP3-2Q9BYR7 98 aa5.46□□□□□ -1.54
CSPG4P12-201ENST00000558282 DNAH9Q9NYC9 4486 aa5.42□□□□□ -1.54
CSPG4P12-201ENST00000558282 ANK2Q01484 3957 aa5.4□□□□□ -1.55
CSPG4P12-201ENST00000558282 KRTAP3-3Q9BYR6 98 aa5.35□□□□□ -1.55
CSPG4P12-201ENST00000558282 PLECQ15149 4684 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms