RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 TRBV7-7A0A0K0K1E9 115 aa6.81□□□□□ -1.32
HMGB1P8-201ENST00000558211 VPS25Q9BRG1 176 aa6.81□□□□□ -1.32
HMGB1P8-201ENST00000558211 A0A1W2PNM2 257 aa6.8□□□□□ -1.32
HMGB1P8-201ENST00000558211 JMJD7-PLA2G4BH0Y9G9 81 aa6.8□□□□□ -1.32
HMGB1P8-201ENST00000558211 TEN1Q86WV5 123 aa6.8□□□□□ -1.32
HMGB1P8-201ENST00000558211 CCKP06307 115 aa6.79□□□□□ -1.32
HMGB1P8-201ENST00000558211 TRBV7-4A0A0J9YYF1 115 aa6.78□□□□□ -1.32
HMGB1P8-201ENST00000558211 C14orf132Q9NPU4 83 aa6.78□□□□□ -1.32
HMGB1P8-201ENST00000558211 A0A087WSZ3 146 aa6.77□□□□□ -1.33
HMGB1P8-201ENST00000558211 Q6Q795 121 aa6.77□□□□□ -1.33
HMGB1P8-201ENST00000558211 IGLV7-46A0A075B6I9 117 aa6.76□□□□□ -1.33
HMGB1P8-201ENST00000558211 PRO0461Q9UI25 63 aa6.76□□□□□ -1.33
HMGB1P8-201ENST00000558211 Q5XG85 94 aa6.75□□□□□ -1.33
HMGB1P8-201ENST00000558211 A0A1B0GV90 55 aa6.74□□□□□ -1.33
HMGB1P8-201ENST00000558211 C1orf195Q5TG92 126 aa6.74□□□□□ -1.33
HMGB1P8-201ENST00000558211 Q6ZQT0 140 aa6.74□□□□□ -1.33
HMGB1P8-201ENST00000558211 OBSCN-AS1Q96MR7 158 aa6.74□□□□□ -1.33
HMGB1P8-201ENST00000558211 HMCN2Q8NDA2 5059 aa6.74□□□□□ -1.33
HMGB1P8-201ENST00000558211 LOC110117498A0A087WWA1 95 aa6.73□□□□□ -1.33
HMGB1P8-201ENST00000558211 FP248Q71RG6 208 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P8-201ENST00000558211 SS18L2Q9UHA2 77 aa6.73□□□□□ -1.33
HMGB1P8-201ENST00000558211 F8W1H4 67 aa6.72□□□□□ -1.33
HMGB1P8-201ENST00000558211 PDE6GP18545 87 aa6.72□□□□□ -1.33
HMGB1P8-201ENST00000558211 ASB16-AS1Q495Z4 193 aa6.7□□□□□ -1.34
HMGB1P8-201ENST00000558211 LPAP08519 4548 aa6.68□□□□□ -1.34
HMGB1P8-201ENST00000558211 ETDBQ3ZM63 59 aa6.68□□□□□ -1.34
HMGB1P8-201ENST00000558211 DEFB116Q30KQ4 102 aa6.67□□□□□ -1.34
HMGB1P8-201ENST00000558211 C9orf92A6NGG3 77 aa6.65□□□□□ -1.34
HMGB1P8-201ENST00000558211 TPRXLQ17RH7 258 aa6.65□□□□□ -1.34
HMGB1P8-201ENST00000558211 Q96NJ1 140 aa6.65□□□□□ -1.34
HMGB1P8-201ENST00000558211 IGKV4-1P06312 121 aa6.64□□□□□ -1.35
HMGB1P8-201ENST00000558211 KRTAP13-3Q3SY46 172 aa6.64□□□□□ -1.35
HMGB1P8-201ENST00000558211 SIGMAR1Q99720 223 aa6.64□□□□□ -1.35
HMGB1P8-201ENST00000558211 A0A1B0GW54 56 aa6.62□□□□□ -1.35
HMGB1P8-201ENST00000558211 LINC00472Q9H8W2 130 aa6.62□□□□□ -1.35
HMGB1P8-201ENST00000558211 LRP2P98164 4655 aa6.61□□□□□ -1.35
HMGB1P8-201ENST00000558211 NREPQ16612 68 aa6.61□□□□□ -1.35
HMGB1P8-201ENST00000558211 IGHV6-1A0A0B4J1U7 121 aa6.55□□□□□ -1.36
HMGB1P8-201ENST00000558211 J3KT08 172 aa6.55□□□□□ -1.36
HMGB1P8-201ENST00000558211 DSCR10P59022 87 aa6.55□□□□□ -1.36
HMGB1P8-201ENST00000558211 Q6ZVQ6 151 aa6.55□□□□□ -1.36
HMGB1P8-201ENST00000558211 LINC00846Q9NV44 126 aa6.55□□□□□ -1.36
HMGB1P8-201ENST00000558211 UBL5Q9BZL1 73 aa6.53□□□□□ -1.36
HMGB1P8-201ENST00000558211 A0A1B0GVX0 72 aa6.52□□□□□ -1.37
HMGB1P8-201ENST00000558211 BPY2O14599 106 aa6.52□□□□□ -1.37
HMGB1P8-201ENST00000558211 NDUFB1O75438 58 aa6.52□□□□□ -1.37
HMGB1P8-201ENST00000558211 LINC00313P59037 77 aa6.52□□□□□ -1.37
HMGB1P8-201ENST00000558211 NOTCH2NLQ7Z3S9 236 aa6.51□□□□□ -1.37
HMGB1P8-201ENST00000558211 UBR4Q5T4S7 5183 aa6.51□□□□□ -1.37
HMGB1P8-201ENST00000558211 A8MWP4 228 aa6.5□□□□□ -1.37
HMGB1P8-201ENST00000558211 KRTAP2-2Q9BYT5 123 aa6.5□□□□□ -1.37
HMGB1P8-201ENST00000558211 IGKV3D-7A0A0C4DH55 119 aa6.49□□□□□ -1.37
HMGB1P8-201ENST00000558211 C8orf87E5RJ46 101 aa6.47□□□□□ -1.37
HMGB1P8-201ENST00000558211 K7EQZ3 153 aa6.46□□□□□ -1.38
HMGB1P8-201ENST00000558211 ACYP1P07311 99 aa6.46□□□□□ -1.38
HMGB1P8-201ENST00000558211 PRR15Q8IV56 129 aa6.46□□□□□ -1.38
HMGB1P8-201ENST00000558211 MUC17Q685J3 4493 aa6.46□□□□□ -1.38
HMGB1P8-201ENST00000558211 RPL37P61927 97 aaKnown RBP6.45□□□□□ -1.38
HMGB1P8-201ENST00000558211 Q8N9L7 120 aa6.45□□□□□ -1.38
HMGB1P8-201ENST00000558211 C8orf17Q9NRJ1 99 aa6.45□□□□□ -1.38
HMGB1P8-201ENST00000558211 PCOTHQ58A44 107 aa6.44□□□□□ -1.38
HMGB1P8-201ENST00000558211 FAM240AA0A1B0GVK7 77 aa6.43□□□□□ -1.38
HMGB1P8-201ENST00000558211 KRTAP16-1A8MUX0 517 aa6.43□□□□□ -1.38
HMGB1P8-201ENST00000558211 RNF213Q63HN8 5207 aa6.42□□□□□ -1.38
HMGB1P8-201ENST00000558211 A8MUU9 505 aa6.41□□□□□ -1.38
HMGB1P8-201ENST00000558211 J3QR89 54 aa6.41□□□□□ -1.38
HMGB1P8-201ENST00000558211 C20orf166-AS1Q96NR2 134 aa6.41□□□□□ -1.38
HMGB1P8-201ENST00000558211 MMP24-AS1A0A0U1RRL7 71 aa6.4□□□□□ -1.38
HMGB1P8-201ENST00000558211 ATP11AUNQ6ZP68 121 aa6.4□□□□□ -1.38
HMGB1P8-201ENST00000558211 CXCL6P80162 114 aa6.38□□□□□ -1.39
HMGB1P8-201ENST00000558211 WFDC13Q8IUB5 93 aa6.38□□□□□ -1.39
HMGB1P8-201ENST00000558211 PRAC1Q96KF2 57 aa6.38□□□□□ -1.39
HMGB1P8-201ENST00000558211 hDV103S1A0JD37 113 aa6.37□□□□□ -1.39
HMGB1P8-201ENST00000558211 MRPL34Q9BQ48 92 aaKnown RBP6.36□□□□□ -1.39
HMGB1P8-201ENST00000558211 KRTAP4-1Q9BYQ7 146 aa6.36□□□□□ -1.39
HMGB1P8-201ENST00000558211 NDUFS5O43920 106 aa6.35□□□□□ -1.39
HMGB1P8-201ENST00000558211 CASC2Q6XLA1 102 aa6.35□□□□□ -1.39
HMGB1P8-201ENST00000558211 TMEM254Q8TBM7 123 aa6.35□□□□□ -1.39
HMGB1P8-201ENST00000558211 LINC00643Q86TS7 51 aa6.34□□□□□ -1.39
HMGB1P8-201ENST00000558211 HCG22E2RYF7 251 aa6.33□□□□□ -1.4
HMGB1P8-201ENST00000558211 HIST1H4AP62805 103 aaKnown RBP6.32□□□□□ -1.4
HMGB1P8-201ENST00000558211 ATP5EP2Q5VTU8 51 aa6.32□□□□□ -1.4
HMGB1P8-201ENST00000558211 K7ERU9 68 aa6.31□□□□□ -1.4
HMGB1P8-201ENST00000558211 MT3P25713 68 aa6.3□□□□□ -1.4
HMGB1P8-201ENST00000558211 MUC2Q02817 5179 aa6.29□□□□□ -1.4
HMGB1P8-201ENST00000558211 ZCCHC13Q8WW36 166 aaKnown RBP6.29□□□□□ -1.4
HMGB1P8-201ENST00000558211 A0A087WVE0 104 aa6.25□□□□□ -1.41
HMGB1P8-201ENST00000558211 A0A0U1RQV1 116 aa6.21□□□□□ -1.42
HMGB1P8-201ENST00000558211 Q5W150 140 aa6.21□□□□□ -1.42
HMGB1P8-201ENST00000558211 MT-ATP8P03928 68 aa6.19□□□□□ -1.42
HMGB1P8-201ENST00000558211 SPINK7P58062 85 aa6.18□□□□□ -1.42
HMGB1P8-201ENST00000558211 TP53AIP1Q9HCN2 124 aa6.17□□□□□ -1.42
HMGB1P8-201ENST00000558211 COX6B2Q6YFQ2 88 aa6.15□□□□□ -1.42
HMGB1P8-201ENST00000558211 FAT4Q6V0I7 4981 aa6.13□□□□□ -1.43
HMGB1P8-201ENST00000558211 HRES1P13985 223 aa6.13□□□□□ -1.43
HMGB1P8-201ENST00000558211 KRTAP19-2Q3LHN2 52 aa6.12□□□□□ -1.43
HMGB1P8-201ENST00000558211 IMUPQ9GZP8 106 aa6.12□□□□□ -1.43
HMGB1P8-201ENST00000558211 SCGB1A1P11684 91 aa6.11□□□□□ -1.43
HMGB1P8-201ENST00000558211 FAM236DA0A1B0GTK5 79 aa6.1□□□□□ -1.43
HMGB1P8-201ENST00000558211 FAM236CP0DP71 79 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms