RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 TMEM256-PLSCR3K7ERE1 68 aa7.77□□□□□ -1.17
SCFD1-224ENST00000557713 DNAL4O96015 105 aa7.77□□□□□ -1.17
SCFD1-224ENST00000557713 TRACP01848 142 aa7.76□□□□□ -1.17
SCFD1-224ENST00000557713 MTURNQ8N3F0 131 aa7.76□□□□□ -1.17
SCFD1-224ENST00000557713 C8orf87E5RJ46 101 aa7.75□□□□□ -1.17
SCFD1-224ENST00000557713 VAMP8Q9BV40 100 aa7.75□□□□□ -1.17
SCFD1-224ENST00000557713 A0A1B0GVX0 72 aa7.74□□□□□ -1.17
SCFD1-224ENST00000557713 KRTAP19-6Q3LI70 58 aa7.73□□□□□ -1.17
SCFD1-224ENST00000557713 ZCCHC13Q8WW36 166 aaKnown RBP7.73□□□□□ -1.17
SCFD1-224ENST00000557713 S100A1P23297 94 aa7.72□□□□□ -1.17
SCFD1-224ENST00000557713 SPINK7P58062 85 aa7.72□□□□□ -1.17
SCFD1-224ENST00000557713 UBE2V1Q13404 147 aa7.72□□□□□ -1.17
SCFD1-224ENST00000557713 PSMB2P49721 201 aa7.71□□□□□ -1.18
SCFD1-224ENST00000557713 KRTAP4-8Q9BYQ9 185 aa7.71□□□□□ -1.18
SCFD1-224ENST00000557713 LINC00846Q9NV44 126 aa7.7□□□□□ -1.18
SCFD1-224ENST00000557713 K7ERJ3 54 aa7.68□□□□□ -1.18
SCFD1-224ENST00000557713 COX6CP09669 75 aa7.68□□□□□ -1.18
SCFD1-224ENST00000557713 VPS25Q9BRG1 176 aa7.67□□□□□ -1.18
SCFD1-224ENST00000557713 A8MWP4 228 aa7.65□□□□□ -1.18
SCFD1-224ENST00000557713 J3KT08 172 aa7.65□□□□□ -1.18
SCFD1-224ENST00000557713 RBM3P98179 157 aaKnown RBP7.65□□□□□ -1.18
SCFD1-224ENST00000557713 Q8N9P0 234 aaPredicted RBP7.65□□□□□ -1.18
SCFD1-224ENST00000557713 HSD52Q0P140 79 aa7.64□□□□□ -1.19
SCFD1-224ENST00000557713 DSCR8Q96T75 97 aa7.63□□□□□ -1.19
SCFD1-224ENST00000557713 C21orf62-AS1Q17RA5 79 aa7.61□□□□□ -1.19
SCFD1-224ENST00000557713 Q6ZQT0 140 aa7.6□□□□□ -1.19
SCFD1-224ENST00000557713 WFDC13Q8IUB5 93 aa7.6□□□□□ -1.19
SCFD1-224ENST00000557713 NDUFB1O75438 58 aa7.58□□□□□ -1.2
SCFD1-224ENST00000557713 C9JAW5 83 aa7.57□□□□□ -1.2
SCFD1-224ENST00000557713 BAALC-AS2P0C853 105 aa7.56□□□□□ -1.2
SCFD1-224ENST00000557713 C8orf17Q9NRJ1 99 aa7.56□□□□□ -1.2
SCFD1-224ENST00000557713 SCGB1C2P0DMR2 95 aa7.55□□□□□ -1.2
SCFD1-224ENST00000557713 KRTAP6-3Q3LI67 103 aa7.54□□□□□ -1.2
SCFD1-224ENST00000557713 LYRM7Q5U5X0 104 aa7.54□□□□□ -1.2
SCFD1-224ENST00000557713 PYY3Q5JQD4 70 aa7.53□□□□□ -1.2
SCFD1-224ENST00000557713 IGKV3D-7A0A0C4DH55 119 aa7.52□□□□□ -1.21
SCFD1-224ENST00000557713 Q6ZVQ6 151 aa7.5□□□□□ -1.21
SCFD1-224ENST00000557713 A0A1B0GW54 56 aa7.49□□□□□ -1.21
SCFD1-224ENST00000557713 H1FX-AS1Q4G0G2 97 aa7.48□□□□□ -1.21
SCFD1-224ENST00000557713 UQCR10Q9UDW1 63 aa7.48□□□□□ -1.21
SCFD1-224ENST00000557713 LOC110117498A0A087WWA1 95 aa7.46□□□□□ -1.22
SCFD1-224ENST00000557713 JMJD7-PLA2G4BH0Y9G9 81 aa7.45□□□□□ -1.22
SCFD1-224ENST00000557713 PRR15Q8IV56 129 aa7.45□□□□□ -1.22
SCFD1-224ENST00000557713 TMEM254Q8TBM7 123 aa7.42□□□□□ -1.22
SCFD1-224ENST00000557713 MRPL34Q9BQ48 92 aaKnown RBP7.42□□□□□ -1.22
SCFD1-224ENST00000557713 MMP24-AS1A0A0U1RRL7 71 aa7.41□□□□□ -1.22
SCFD1-224ENST00000557713 PDE6GP18545 87 aa7.41□□□□□ -1.22
SCFD1-224ENST00000557713 ATXN8Q156A1 80 aa7.39□□□□□ -1.23
SCFD1-224ENST00000557713 NREPQ16612 68 aa7.38□□□□□ -1.23
SCFD1-224ENST00000557713 C14orf132Q9NPU4 83 aa7.38□□□□□ -1.23
SCFD1-224ENST00000557713 hDV103S1A0JD37 113 aa7.35□□□□□ -1.23
SCFD1-224ENST00000557713 NEBP20929 6669 aa7.34□□□□□ -1.23
SCFD1-224ENST00000557713 NAA38Q9BRA0 125 aaKnown RBP7.34□□□□□ -1.23
SCFD1-224ENST00000557713 NDUFS5O43920 106 aa7.33□□□□□ -1.24
SCFD1-224ENST00000557713 IGKV2D-30A0A075B6S6 120 aa7.32□□□□□ -1.24
SCFD1-224ENST00000557713 K7EQZ3 153 aa7.32□□□□□ -1.24
SCFD1-224ENST00000557713 IGKV2-30P06310 120 aa7.32□□□□□ -1.24
SCFD1-224ENST00000557713 Q5W150 140 aa7.32□□□□□ -1.24
SCFD1-224ENST00000557713 LCE3BQ5TA77 95 aa7.29□□□□□ -1.24
SCFD1-224ENST00000557713 C7orf65Q6ZTY9 151 aa7.29□□□□□ -1.24
SCFD1-224ENST00000557713 M0R143 59 aa7.25□□□□□ -1.25
SCFD1-224ENST00000557713 A6NN06 94 aa7.24□□□□□ -1.25
SCFD1-224ENST00000557713 MT1BP07438 61 aa7.24□□□□□ -1.25
SCFD1-224ENST00000557713 C4orf26Q17RF5 130 aa7.24□□□□□ -1.25
SCFD1-224ENST00000557713 KRTAP9-9Q9BYP9 154 aa7.24□□□□□ -1.25
SCFD1-224ENST00000557713 KRTAP9-4Q9BYQ2 154 aa7.24□□□□□ -1.25
SCFD1-224ENST00000557713 MUC12Q9UKN1 5478 aa7.23□□□□□ -1.25
SCFD1-224ENST00000557713 KRTAP4-8A0A0G2JLE6 195 aa7.22□□□□□ -1.25
SCFD1-224ENST00000557713 BPY2O14599 106 aa7.21□□□□□ -1.26
SCFD1-224ENST00000557713 C5orf47Q569G3 176 aa7.21□□□□□ -1.26
SCFD1-224ENST00000557713 TMA7Q9Y2S6 64 aaKnown RBP7.19□□□□□ -1.26
SCFD1-224ENST00000557713 FAM236AA0A1B0GUQ0 79 aa7.18□□□□□ -1.26
SCFD1-224ENST00000557713 FAM236BA0A1B0GV22 79 aa7.18□□□□□ -1.26
SCFD1-224ENST00000557713 HCG22E2RYF7 251 aa7.18□□□□□ -1.26
SCFD1-224ENST00000557713 KRTAP19-8Q3LI54 63 aa7.18□□□□□ -1.26
SCFD1-224ENST00000557713 Q5VV11 94 aa7.18□□□□□ -1.26
SCFD1-224ENST00000557713 CASC2Q6XLA1 102 aa7.18□□□□□ -1.26
SCFD1-224ENST00000557713 KRTAP3-1Q9BYR8 98 aa7.18□□□□□ -1.26
SCFD1-224ENST00000557713 SPRR2GQ9BYE4 73 aa7.17□□□□□ -1.26
SCFD1-224ENST00000557713 Q8N9L7 120 aa7.16□□□□□ -1.26
SCFD1-224ENST00000557713 H3BT86 120 aa7.14□□□□□ -1.27
SCFD1-224ENST00000557713 CXCL6P80162 114 aa7.14□□□□□ -1.27
SCFD1-224ENST00000557713 KRTAP10-5P60370 271 aa7.13□□□□□ -1.27
SCFD1-224ENST00000557713 CSAG1Q6PB30 78 aa7.12□□□□□ -1.27
SCFD1-224ENST00000557713 S4R3F8 94 aa7.12□□□□□ -1.27
SCFD1-224ENST00000557713 KRTAP4-12Q9BQ66 201 aa7.11□□□□□ -1.27
SCFD1-224ENST00000557713 KRTAP20-1Q3LI63 56 aa7.09□□□□□ -1.27
SCFD1-224ENST00000557713 LCA10Q71F78 164 aa7.09□□□□□ -1.27
SCFD1-224ENST00000557713 KRTAP5-9P26371 169 aa7.08□□□□□ -1.28
SCFD1-224ENST00000557713 C1orf64Q8NEQ6 169 aa7.07□□□□□ -1.28
SCFD1-224ENST00000557713 C9orf118A6NHY6 69 aa7.05□□□□□ -1.28
SCFD1-224ENST00000557713 TSTD3H0UI37 97 aa7.05□□□□□ -1.28
SCFD1-224ENST00000557713 BATFQ16520 125 aa7.05□□□□□ -1.28
SCFD1-224ENST00000557713 KLKP1Q107X0 134 aa7.04□□□□□ -1.28
SCFD1-224ENST00000557713 A0A1W2PPM0 123 aa7.02□□□□□ -1.29
SCFD1-224ENST00000557713 KRTAP4-7Q9BYR0 210 aa7.02□□□□□ -1.29
SCFD1-224ENST00000557713 KMT2DO14686 5537 aa7.01□□□□□ -1.29
SCFD1-224ENST00000557713 MDN1Q9NU22 5596 aa7□□□□□ -1.29
SCFD1-224ENST00000557713 TAX1BP3O14907 124 aa7□□□□□ -1.29
SCFD1-224ENST00000557713 SMIM6P0DI80 62 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms