RNA–Protein interactions for RNA: ENST00000557478.5

NEDD1-212, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-212ENST00000557478 LYRM7Q5U5X0 104 aa9.03□□□□□ -0.96
NEDD1-212ENST00000557478 IGHV6-1A0A0B4J1U7 121 aa9.01□□□□□ -0.97
NEDD1-212ENST00000557478 SMIM6P0DI80 62 aa9.01□□□□□ -0.97
NEDD1-212ENST00000557478 KRTAP16-1A8MUX0 517 aa9□□□□□ -0.97
NEDD1-212ENST00000557478 FSIP2Q5CZC0 6907 aa9□□□□□ -0.97
NEDD1-212ENST00000557478 A0A1B0GVX0 72 aa8.99□□□□□ -0.97
NEDD1-212ENST00000557478 NDUFB1O75438 58 aa8.98□□□□□ -0.97
NEDD1-212ENST00000557478 DEFB116Q30KQ4 102 aa8.98□□□□□ -0.97
NEDD1-212ENST00000557478 Q6ZQT0 140 aa8.97□□□□□ -0.97
NEDD1-212ENST00000557478 LOC110117498A0A087WWA1 95 aa8.95□□□□□ -0.98
NEDD1-212ENST00000557478 RBM12B-AS1Q9P1G2 102 aa8.95□□□□□ -0.98
NEDD1-212ENST00000557478 TSTD3H0UI37 97 aa8.94□□□□□ -0.98
NEDD1-212ENST00000557478 CRCT1Q9UGL9 99 aa8.93□□□□□ -0.98
NEDD1-212ENST00000557478 NOTCH2NLQ7Z3S9 236 aa8.91□□□□□ -0.98
NEDD1-212ENST00000557478 FAM236DA0A1B0GTK5 79 aa8.89□□□□□ -0.99
NEDD1-212ENST00000557478 FAM236CP0DP71 79 aa8.89□□□□□ -0.99
NEDD1-212ENST00000557478 MTURNQ8N3F0 131 aa8.89□□□□□ -0.99
NEDD1-212ENST00000557478 A8MWP4 228 aa8.86□□□□□ -0.99
NEDD1-212ENST00000557478 ZCCHC13Q8WW36 166 aaKnown RBP8.85□□□□□ -0.99
NEDD1-212ENST00000557478 NAA38Q9BRA0 125 aaKnown RBP8.85□□□□□ -0.99
NEDD1-212ENST00000557478 Q8N9P0 234 aaPredicted RBP8.84□□□□□ -0.99
NEDD1-212ENST00000557478 NREPQ16612 68 aa8.83□□□□□ -1
NEDD1-212ENST00000557478 MPLKIPQ8TAP9 179 aa8.83□□□□□ -1
NEDD1-212ENST00000557478 HRES1P13985 223 aa8.81□□□□□ -1
NEDD1-212ENST00000557478 C14orf132Q9NPU4 83 aa8.81□□□□□ -1
NEDD1-212ENST00000557478 H3BT86 120 aa8.8□□□□□ -1
NEDD1-212ENST00000557478 C8orf17Q9NRJ1 99 aa8.8□□□□□ -1
NEDD1-212ENST00000557478 BATFQ16520 125 aa8.79□□□□□ -1
NEDD1-212ENST00000557478 C9orf118A6NHY6 69 aa8.77□□□□□ -1.01
NEDD1-212ENST00000557478 IGKV3D-7A0A0C4DH55 119 aa8.76□□□□□ -1.01
NEDD1-212ENST00000557478 SPINK7P58062 85 aa8.76□□□□□ -1.01
NEDD1-212ENST00000557478 Q6ZVQ6 151 aa8.76□□□□□ -1.01
NEDD1-212ENST00000557478 PRR15Q8IV56 129 aa8.76□□□□□ -1.01
NEDD1-212ENST00000557478 A0A1W2PPM0 123 aa8.73□□□□□ -1.01
NEDD1-212ENST00000557478 KRTAP9-8Q9BYQ0 159 aa8.72□□□□□ -1.01
NEDD1-212ENST00000557478 TMEM254Q8TBM7 123 aa8.7□□□□□ -1.02
NEDD1-212ENST00000557478 SMCPP49901 116 aaPredicted RBP8.69□□□□□ -1.02
NEDD1-212ENST00000557478 TAX1BP3O14907 124 aa8.68□□□□□ -1.02
NEDD1-212ENST00000557478 MRPL34Q9BQ48 92 aaKnown RBP8.68□□□□□ -1.02
NEDD1-212ENST00000557478 hDV103S1A0JD37 113 aa8.66□□□□□ -1.02
NEDD1-212ENST00000557478 LOC105371267A0A1B0GV96 52 aa8.65□□□□□ -1.02
NEDD1-212ENST00000557478 BPY2O14599 106 aa8.65□□□□□ -1.02
NEDD1-212ENST00000557478 MMP24-AS1A0A0U1RRL7 71 aa8.64□□□□□ -1.03
NEDD1-212ENST00000557478 WFDC13Q8IUB5 93 aa8.64□□□□□ -1.03
NEDD1-212ENST00000557478 SPCS1Q9Y6A9 102 aa8.61□□□□□ -1.03
NEDD1-212ENST00000557478 K7EQZ3 153 aa8.6□□□□□ -1.03
NEDD1-212ENST00000557478 NDUFS5O43920 106 aa8.59□□□□□ -1.03
NEDD1-212ENST00000557478 MT2AP02795 61 aa8.59□□□□□ -1.03
NEDD1-212ENST00000557478 COL5A1-AS1Q5SY13 56 aa8.57□□□□□ -1.04
NEDD1-212ENST00000557478 KRTAP10-10P60014 251 aa8.56□□□□□ -1.04
NEDD1-212ENST00000557478 USH2AO75445 5202 aa8.54□□□□□ -1.04
NEDD1-212ENST00000557478 UBL5Q9BZL1 73 aa8.53□□□□□ -1.04
NEDD1-212ENST00000557478 CASC2Q6XLA1 102 aa8.51□□□□□ -1.05
NEDD1-212ENST00000557478 C7orf65Q6ZTY9 151 aa8.51□□□□□ -1.05
NEDD1-212ENST00000557478 MT1FP04733 61 aa8.5□□□□□ -1.05
NEDD1-212ENST00000557478 H1FX-AS1Q4G0G2 97 aa8.49□□□□□ -1.05
NEDD1-212ENST00000557478 CXCL6P80162 114 aa8.48□□□□□ -1.05
NEDD1-212ENST00000557478 KRTAP9-3Q9BYQ3 159 aa8.46□□□□□ -1.06
NEDD1-212ENST00000557478 K7EP34 96 aa8.45□□□□□ -1.06
NEDD1-212ENST00000557478 SSPOA2VEC9 5147 aa8.45□□□□□ -1.06
NEDD1-212ENST00000557478 IGKV2D-30A0A075B6S6 120 aa8.44□□□□□ -1.06
NEDD1-212ENST00000557478 IGKV2-30P06310 120 aa8.44□□□□□ -1.06
NEDD1-212ENST00000557478 GTF2H5Q6ZYL4 71 aa8.44□□□□□ -1.06
NEDD1-212ENST00000557478 HCG22E2RYF7 251 aa8.43□□□□□ -1.06
NEDD1-212ENST00000557478 LINC00846Q9NV44 126 aa8.42□□□□□ -1.06
NEDD1-212ENST00000557478 PRO0461Q9UI25 63 aa8.42□□□□□ -1.06
NEDD1-212ENST00000557478 Q8N9L7 120 aa8.41□□□□□ -1.06
NEDD1-212ENST00000557478 Q5W150 140 aa8.4□□□□□ -1.06
NEDD1-212ENST00000557478 F8W1H4 67 aa8.38□□□□□ -1.07
NEDD1-212ENST00000557478 TP53AIP1Q9HCN2 124 aa8.36□□□□□ -1.07
NEDD1-212ENST00000557478 FCGBPQ9Y6R7 5405 aaPredicted RBP8.31□□□□□ -1.08
NEDD1-212ENST00000557478 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.28□□□□□ -1.08
NEDD1-212ENST00000557478 C4orf26Q17RF5 130 aa8.28□□□□□ -1.08
NEDD1-212ENST00000557478 KRTAP19-1Q8IUB9 90 aa8.27□□□□□ -1.09
NEDD1-212ENST00000557478 ETDBQ3ZM63 59 aa8.25□□□□□ -1.09
NEDD1-212ENST00000557478 ACYP1P07311 99 aa8.23□□□□□ -1.09
NEDD1-212ENST00000557478 KRTAP9-7A8MTY7 169 aa8.2□□□□□ -1.1
NEDD1-212ENST00000557478 KRTAP19-6Q3LI70 58 aa8.18□□□□□ -1.1
NEDD1-212ENST00000557478 C1orf64Q8NEQ6 169 aa8.18□□□□□ -1.1
NEDD1-212ENST00000557478 PCP4L1A6NKN8 68 aa8.17□□□□□ -1.1
NEDD1-212ENST00000557478 S4R3F8 94 aa8.17□□□□□ -1.1
NEDD1-212ENST00000557478 ATP5EP2Q5VTU8 51 aa8.16□□□□□ -1.1
NEDD1-212ENST00000557478 CSAG1Q6PB30 78 aa8.16□□□□□ -1.1
NEDD1-212ENST00000557478 FAM240AA0A1B0GVK7 77 aa8.15□□□□□ -1.1
NEDD1-212ENST00000557478 C5orf47Q569G3 176 aa8.13□□□□□ -1.11
NEDD1-212ENST00000557478 TRAV22A0A0B4J277 110 aa8.1□□□□□ -1.11
NEDD1-212ENST00000557478 LOC101927531A0A1B0GV80 90 aa8.1□□□□□ -1.11
NEDD1-212ENST00000557478 KRTAP3-1Q9BYR8 98 aa8.1□□□□□ -1.11
NEDD1-212ENST00000557478 FAM236AA0A1B0GUQ0 79 aa8.09□□□□□ -1.11
NEDD1-212ENST00000557478 FAM236BA0A1B0GV22 79 aa8.09□□□□□ -1.11
NEDD1-212ENST00000557478 MACF1Q9UPN3 7388 aaKnown RBP8.09□□□□□ -1.11
NEDD1-212ENST00000557478 CYP4F30PQ9H0H9 118 aa8.08□□□□□ -1.12
NEDD1-212ENST00000557478 ATOX1O00244 68 aa8.05□□□□□ -1.12
NEDD1-212ENST00000557478 LCA10Q71F78 164 aa8.05□□□□□ -1.12
NEDD1-212ENST00000557478 UQCRQO14949 82 aa8.03□□□□□ -1.12
NEDD1-212ENST00000557478 HIST1H4AP62805 103 aaKnown RBP8.01□□□□□ -1.13
NEDD1-212ENST00000557478 SYNE2Q8WXH0 6885 aaKnown RBP7.97□□□□□ -1.13
NEDD1-212ENST00000557478 LINC00643Q86TS7 51 aa7.96□□□□□ -1.14
NEDD1-212ENST00000557478 SPRR2GQ9BYE4 73 aa7.94□□□□□ -1.14
NEDD1-212ENST00000557478 CRIPTQ9P021 101 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms