RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 C3orf79P0CE67 100 aa3.86□□□□□ -1.79
NEDD1-211ENST00000557454 PMCHL2Q9BQD1 86 aa3.86□□□□□ -1.79
NEDD1-211ENST00000557454 COX19Q49B96 90 aa3.85□□□□□ -1.79
NEDD1-211ENST00000557454 DPM2O94777 84 aa3.84□□□□□ -1.79
NEDD1-211ENST00000557454 C8orf87E5RJ46 101 aa3.83□□□□□ -1.8
NEDD1-211ENST00000557454 S100PP25815 95 aa3.83□□□□□ -1.8
NEDD1-211ENST00000557454 PPDPFLQ8WWR9 84 aa3.83□□□□□ -1.8
NEDD1-211ENST00000557454 E9PLD3 99 aa3.82□□□□□ -1.8
NEDD1-211ENST00000557454 IGKCP01834 107 aa3.82□□□□□ -1.8
NEDD1-211ENST00000557454 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.82□□□□□ -1.8
NEDD1-211ENST00000557454 VAMP3Q15836 100 aa3.81□□□□□ -1.8
NEDD1-211ENST00000557454 LYRM7Q5U5X0 104 aa3.81□□□□□ -1.8
NEDD1-211ENST00000557454 LCA10Q71F78 164 aa3.81□□□□□ -1.8
NEDD1-211ENST00000557454 RBM3P98179 157 aaKnown RBP3.8□□□□□ -1.8
NEDD1-211ENST00000557454 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
NEDD1-211ENST00000557454 Q6ZVQ6 151 aa3.8□□□□□ -1.8
NEDD1-211ENST00000557454 CHCHD1Q96BP2 118 aaKnown RBP3.8□□□□□ -1.8
NEDD1-211ENST00000557454 DSCR8Q96T75 97 aa3.8□□□□□ -1.8
NEDD1-211ENST00000557454 HSPB8Q9UJY1 196 aa3.8□□□□□ -1.8
NEDD1-211ENST00000557454 TRAPPC1Q9Y5R8 145 aa3.8□□□□□ -1.8
NEDD1-211ENST00000557454 IGKV3D-7A0A0C4DH55 119 aa3.79□□□□□ -1.8
NEDD1-211ENST00000557454 A0A1B0GVX0 72 aa3.79□□□□□ -1.8
NEDD1-211ENST00000557454 LINC00472Q9H8W2 130 aa3.79□□□□□ -1.8
NEDD1-211ENST00000557454 PRR15Q8IV56 129 aa3.78□□□□□ -1.8
NEDD1-211ENST00000557454 RAB37Q96AX2 223 aa3.78□□□□□ -1.8
NEDD1-211ENST00000557454 TTTY13Q9BZ97 58 aa3.78□□□□□ -1.8
NEDD1-211ENST00000557454 MT3P25713 68 aa3.77□□□□□ -1.81
NEDD1-211ENST00000557454 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
NEDD1-211ENST00000557454 HSBP1O75506 76 aa3.75□□□□□ -1.81
NEDD1-211ENST00000557454 NDUFV3P56181 108 aaKnown RBP3.75□□□□□ -1.81
NEDD1-211ENST00000557454 CSAG1Q6PB30 78 aa3.75□□□□□ -1.81
NEDD1-211ENST00000557454 LEPROTL1O95214 131 aa3.74□□□□□ -1.81
NEDD1-211ENST00000557454 CRIPTQ9P021 101 aa3.74□□□□□ -1.81
NEDD1-211ENST00000557454 H3BMG7 143 aa3.73□□□□□ -1.81
NEDD1-211ENST00000557454 KRTAP10-7P60409 375 aaPredicted RBP3.73□□□□□ -1.81
NEDD1-211ENST00000557454 COPS9Q8WXC6 57 aa3.73□□□□□ -1.81
NEDD1-211ENST00000557454 IFITM1P13164 125 aa3.72□□□□□ -1.81
NEDD1-211ENST00000557454 MUSTN1Q8IVN3 82 aa3.72□□□□□ -1.81
NEDD1-211ENST00000557454 S4R3F8 94 aa3.72□□□□□ -1.81
NEDD1-211ENST00000557454 C12orf57Q99622 126 aa3.71□□□□□ -1.82
NEDD1-211ENST00000557454 SCGB1D4Q6XE38 83 aa3.7□□□□□ -1.82
NEDD1-211ENST00000557454 TRBV7-4A0A0J9YYF1 115 aa3.69□□□□□ -1.82
NEDD1-211ENST00000557454 FABP4P15090 132 aa3.69□□□□□ -1.82
NEDD1-211ENST00000557454 KRTAP10-12P60413 245 aa3.69□□□□□ -1.82
NEDD1-211ENST00000557454 C4orf26Q17RF5 130 aa3.69□□□□□ -1.82
NEDD1-211ENST00000557454 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
NEDD1-211ENST00000557454 TRGC2P03986 189 aa3.68□□□□□ -1.82
NEDD1-211ENST00000557454 PLAC4Q8WY50 150 aa3.66□□□□□ -1.82
NEDD1-211ENST00000557454 A0A1B0GV72 72 aa3.64□□□□□ -1.83
NEDD1-211ENST00000557454 BVES-AS1Q5T3Y7 98 aa3.64□□□□□ -1.83
NEDD1-211ENST00000557454 C7orf65Q6ZTY9 151 aa3.64□□□□□ -1.83
NEDD1-211ENST00000557454 OCR1Q9BZK8 76 aa3.64□□□□□ -1.83
NEDD1-211ENST00000557454 C8orf17Q9NRJ1 99 aa3.64□□□□□ -1.83
NEDD1-211ENST00000557454 TRACP01848 142 aa3.63□□□□□ -1.83
NEDD1-211ENST00000557454 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
NEDD1-211ENST00000557454 ANKRD29Q8N6D5 301 aa3.63□□□□□ -1.83
NEDD1-211ENST00000557454 FABP2P12104 132 aa3.62□□□□□ -1.83
NEDD1-211ENST00000557454 C2orf91Q6ZV80 131 aa3.62□□□□□ -1.83
NEDD1-211ENST00000557454 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
NEDD1-211ENST00000557454 TMEM218A2RU14 115 aa3.61□□□□□ -1.83
NEDD1-211ENST00000557454 CYSTM1Q9H1C7 97 aa3.61□□□□□ -1.83
NEDD1-211ENST00000557454 A8MUN3 132 aa3.6□□□□□ -1.83
NEDD1-211ENST00000557454 CCKP06307 115 aa3.6□□□□□ -1.83
NEDD1-211ENST00000557454 MUC5ACP98088 5654 aa3.59□□□□□ -1.84
NEDD1-211ENST00000557454 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
NEDD1-211ENST00000557454 J3KT08 172 aa3.58□□□□□ -1.84
NEDD1-211ENST00000557454 NDUFB1O75438 58 aa3.58□□□□□ -1.84
NEDD1-211ENST00000557454 PDE6GP18545 87 aa3.58□□□□□ -1.84
NEDD1-211ENST00000557454 SYS1-DBNDD2H3BUS1 97 aa3.56□□□□□ -1.84
NEDD1-211ENST00000557454 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
NEDD1-211ENST00000557454 SNCGO76070 127 aa3.55□□□□□ -1.84
NEDD1-211ENST00000557454 K7EQZ3 153 aa3.54□□□□□ -1.84
NEDD1-211ENST00000557454 LINC01545Q5VT33 79 aa3.54□□□□□ -1.84
NEDD1-211ENST00000557454 Q5W150 140 aa3.54□□□□□ -1.84
NEDD1-211ENST00000557454 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
NEDD1-211ENST00000557454 UQCC3Q6UW78 93 aa3.54□□□□□ -1.84
NEDD1-211ENST00000557454 VPS25Q9BRG1 176 aa3.54□□□□□ -1.84
NEDD1-211ENST00000557454 NDUFS5O43920 106 aa3.53□□□□□ -1.84
NEDD1-211ENST00000557454 MRPL34Q9BQ48 92 aaKnown RBP3.53□□□□□ -1.84
NEDD1-211ENST00000557454 H0YAA0 97 aa3.52□□□□□ -1.85
NEDD1-211ENST00000557454 MT1EP04732 61 aa3.51□□□□□ -1.85
NEDD1-211ENST00000557454 KRTAP19-7Q3SYF9 63 aa3.51□□□□□ -1.85
NEDD1-211ENST00000557454 C1orf64Q8NEQ6 169 aa3.51□□□□□ -1.85
NEDD1-211ENST00000557454 TMEM254Q8TBM7 123 aa3.51□□□□□ -1.85
NEDD1-211ENST00000557454 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
NEDD1-211ENST00000557454 MMP24-AS1A0A0U1RRL7 71 aa3.48□□□□□ -1.85
NEDD1-211ENST00000557454 H0YGX0 51 aa3.48□□□□□ -1.85
NEDD1-211ENST00000557454 YPEL4Q96NS1 127 aa3.48□□□□□ -1.85
NEDD1-211ENST00000557454 CLLU1Q5K131 121 aa3.45□□□□□ -1.86
NEDD1-211ENST00000557454 A0A1B0GX51 115 aa3.44□□□□□ -1.86
NEDD1-211ENST00000557454 hDV103S1A0JD37 113 aa3.43□□□□□ -1.86
NEDD1-211ENST00000557454 Q6ZQT0 140 aa3.43□□□□□ -1.86
NEDD1-211ENST00000557454 A0A087WVE0 104 aa3.42□□□□□ -1.86
NEDD1-211ENST00000557454 MT1GP13640 62 aa3.42□□□□□ -1.86
NEDD1-211ENST00000557454 ATOH7Q8N100 152 aa3.42□□□□□ -1.86
NEDD1-211ENST00000557454 CXCL6P80162 114 aa3.41□□□□□ -1.86
NEDD1-211ENST00000557454 ADM2Q7Z4H4 148 aa3.41□□□□□ -1.86
NEDD1-211ENST00000557454 ORMDL1Q9P0S3 153 aa3.41□□□□□ -1.86
NEDD1-211ENST00000557454 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
NEDD1-211ENST00000557454 MT1MQ8N339 61 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms