RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 PKD1P98161 4303 aa0.26□□□□□ -2.37
HMGB1P14-201ENST00000557424 EFCAB6Q5THR3 1501 aa0.26□□□□□ -2.37
HMGB1P14-201ENST00000557424 DDX60Q8IY21 1712 aaKnown RBP0.26□□□□□ -2.37
HMGB1P14-201ENST00000557424 NBASA2RRP1 2371 aa0.26□□□□□ -2.37
HMGB1P14-201ENST00000557424 COL12A1Q99715 3063 aa0.26□□□□□ -2.37
HMGB1P14-201ENST00000557424 DYNC2H1Q8NCM8 4307 aaKnown RBP0.26□□□□□ -2.37
HMGB1P14-201ENST00000557424 DNAH2Q9P225 4427 aa0.25□□□□□ -2.37
HMGB1P14-201ENST00000557424 TACC2O95359 2948 aa0.25□□□□□ -2.37
HMGB1P14-201ENST00000557424 WNK1Q9H4A3 2382 aa0.25□□□□□ -2.37
HMGB1P14-201ENST00000557424 CDC42BPAQ5VT25 1732 aa0.25□□□□□ -2.37
HMGB1P14-201ENST00000557424 ABCC8Q09428 1581 aa0.25□□□□□ -2.37
HMGB1P14-201ENST00000557424 IQGAP2Q13576 1575 aa0.25□□□□□ -2.37
HMGB1P14-201ENST00000557424 TOP2AP11388 1531 aaKnown RBP0.25□□□□□ -2.37
HMGB1P14-201ENST00000557424 DNAH8Q96JB1 4490 aa0.25□□□□□ -2.37
HMGB1P14-201ENST00000557424 DNAH7Q8WXX0 4024 aa0.25□□□□□ -2.37
HMGB1P14-201ENST00000557424 PLNP26678 52 aa0.25□□□□□ -2.37
HMGB1P14-201ENST00000557424 TOMM5Q8N4H5 51 aa0.25□□□□□ -2.37
HMGB1P14-201ENST00000557424 CMC2Q9NRP2 79 aa0.25□□□□□ -2.37
HMGB1P14-201ENST00000557424 DMXL1Q9Y485 3027 aa0.25□□□□□ -2.37
HMGB1P14-201ENST00000557424 DNAH9Q9NYC9 4486 aa0.25□□□□□ -2.37
HMGB1P14-201ENST00000557424 PKD1L2Q7Z442 2459 aa0.25□□□□□ -2.37
HMGB1P14-201ENST00000557424 FLGP20930 4061 aaPredicted RBP0.25□□□□□ -2.37
HMGB1P14-201ENST00000557424 COL7A1Q02388 2944 aa0.24□□□□□ -2.37
HMGB1P14-201ENST00000557424 NBEAQ8NFP9 2946 aa0.24□□□□□ -2.37
HMGB1P14-201ENST00000557424 MAP1AP78559 2803 aaPredicted RBP0.24□□□□□ -2.37
HMGB1P14-201ENST00000557424 NBEAL2Q6ZNJ1 2754 aa0.24□□□□□ -2.37
HMGB1P14-201ENST00000557424 IGSF10Q6WRI0 2623 aa0.24□□□□□ -2.37
HMGB1P14-201ENST00000557424 ZFHX4Q86UP3 3567 aa0.24□□□□□ -2.37
HMGB1P14-201ENST00000557424 ANK3Q12955 4377 aaKnown RBP0.24□□□□□ -2.37
HMGB1P14-201ENST00000557424 VPS13DQ5THJ4 4388 aa0.24□□□□□ -2.37
HMGB1P14-201ENST00000557424 DNAH1Q9P2D7 4330 aa0.24□□□□□ -2.37
HMGB1P14-201ENST00000557424 MGAQ8IWI9 3026 aa0.24□□□□□ -2.37
HMGB1P14-201ENST00000557424 H0YGX0 51 aa0.24□□□□□ -2.37
HMGB1P14-201ENST00000557424 TFF3Q07654 80 aa0.24□□□□□ -2.37
HMGB1P14-201ENST00000557424 TMEM167BQ9NRX6 74 aa0.24□□□□□ -2.37
HMGB1P14-201ENST00000557424 ABRACLQ9P1F3 81 aa0.24□□□□□ -2.37
HMGB1P14-201ENST00000557424 HSPG2P98160 4391 aa0.24□□□□□ -2.37
HMGB1P14-201ENST00000557424 DNAH6Q9C0G6 4158 aa0.24□□□□□ -2.37
HMGB1P14-201ENST00000557424 LRRK2Q5S007 2527 aa0.24□□□□□ -2.37
HMGB1P14-201ENST00000557424 FAM208AQ9UK61 1670 aaKnown RBP0.24□□□□□ -2.37
HMGB1P14-201ENST00000557424 GCN1Q92616 2671 aaKnown RBP0.23□□□□□ -2.37
HMGB1P14-201ENST00000557424 SMG1Q96Q15 3661 aaKnown RBP0.23□□□□□ -2.37
HMGB1P14-201ENST00000557424 MUC2Q02817 5179 aa0.23□□□□□ -2.37
HMGB1P14-201ENST00000557424 CRYBG3Q68DQ2 2970 aa0.23□□□□□ -2.37
HMGB1P14-201ENST00000557424 HMCN2Q8NDA2 5059 aa0.23□□□□□ -2.37
HMGB1P14-201ENST00000557424 SMIM27A0A1W2PRY6 76 aa0.23□□□□□ -2.37
HMGB1P14-201ENST00000557424 LINC01546A6NGU7 62 aa0.23□□□□□ -2.37
HMGB1P14-201ENST00000557424 TIMM8BQ9Y5J9 83 aaPredicted RBP0.23□□□□□ -2.37
HMGB1P14-201ENST00000557424 CUBNO60494 3623 aa0.23□□□□□ -2.37
HMGB1P14-201ENST00000557424 APOBP04114 4563 aaKnown RBP0.23□□□□□ -2.37
HMGB1P14-201ENST00000557424 IQGAP1P46940 1657 aa0.23□□□□□ -2.37
HMGB1P14-201ENST00000557424 LMO7Q8WWI1 1683 aa0.23□□□□□ -2.37
HMGB1P14-201ENST00000557424 CFAP54Q96N23 3096 aa0.23□□□□□ -2.37
HMGB1P14-201ENST00000557424 ACANP16112 2415 aa0.23□□□□□ -2.37
HMGB1P14-201ENST00000557424 UTP20O75691 2785 aaKnown RBP0.23□□□□□ -2.37
HMGB1P14-201ENST00000557424 ITPR1Q14643 2758 aa0.23□□□□□ -2.37
HMGB1P14-201ENST00000557424 APC2O95996 2303 aa0.22□□□□□ -2.37
HMGB1P14-201ENST00000557424 FLNAP21333 2647 aaKnown RBP0.22□□□□□ -2.37
HMGB1P14-201ENST00000557424 LAMA5O15230 3695 aa0.22□□□□□ -2.37
HMGB1P14-201ENST00000557424 RIF1Q5UIP0 2472 aaKnown RBP0.22□□□□□ -2.37
HMGB1P14-201ENST00000557424 RANBP2P49792 3224 aaKnown RBP0.22□□□□□ -2.37
HMGB1P14-201ENST00000557424 TGP01266 2768 aa0.22□□□□□ -2.37
HMGB1P14-201ENST00000557424 DNAH10Q8IVF4 4471 aa0.22□□□□□ -2.37
HMGB1P14-201ENST00000557424 FLNBO75369 2602 aaKnown RBP0.22□□□□□ -2.37
HMGB1P14-201ENST00000557424 EPG5Q9HCE0 2579 aa0.22□□□□□ -2.37
HMGB1P14-201ENST00000557424 RELNP78509 3460 aa0.22□□□□□ -2.37
HMGB1P14-201ENST00000557424 TENM2Q9NT68 2774 aa0.22□□□□□ -2.37
HMGB1P14-201ENST00000557424 FAT3Q8TDW7 4589 aa0.21□□□□□ -2.38
HMGB1P14-201ENST00000557424 NSD1Q96L73 2696 aaPredicted RBP0.21□□□□□ -2.38
HMGB1P14-201ENST00000557424 ACACAQ13085 2346 aa0.21□□□□□ -2.38
HMGB1P14-201ENST00000557424 SETD2Q9BYW2 2564 aaPredicted RBP0.21□□□□□ -2.38
HMGB1P14-201ENST00000557424 SPTBN4Q9H254 2564 aa0.21□□□□□ -2.38
HMGB1P14-201ENST00000557424 ADGRG4Q8IZF6 3080 aa0.21□□□□□ -2.38
HMGB1P14-201ENST00000557424 DMXL2Q8TDJ6 3036 aa0.21□□□□□ -2.38
HMGB1P14-201ENST00000557424 KAAG1Q9UBP8 84 aa0.21□□□□□ -2.38
HMGB1P14-201ENST00000557424 ANKRD11Q6UB99 2663 aaPredicted RBP0.21□□□□□ -2.38
HMGB1P14-201ENST00000557424 WDR87Q6ZQQ6 2873 aa0.21□□□□□ -2.38
HMGB1P14-201ENST00000557424 TRRAPQ9Y4A5 3859 aa0.21□□□□□ -2.38
HMGB1P14-201ENST00000557424 PKHD1P08F94 4074 aa0.21□□□□□ -2.38
HMGB1P14-201ENST00000557424 HIVEP1P15822 2718 aa0.21□□□□□ -2.38
HMGB1P14-201ENST00000557424 SPG11Q96JI7 2443 aa0.21□□□□□ -2.38
HMGB1P14-201ENST00000557424 FAM186AA6NE01 2351 aa0.2□□□□□ -2.38
HMGB1P14-201ENST00000557424 COL6A5A8TX70 2615 aa0.2□□□□□ -2.38
HMGB1P14-201ENST00000557424 MAST4O15021 2626 aa0.2□□□□□ -2.38
HMGB1P14-201ENST00000557424 LRBAP50851 2863 aa0.2□□□□□ -2.38
HMGB1P14-201ENST00000557424 PRUNE2Q8WUY3 3088 aa0.2□□□□□ -2.38
HMGB1P14-201ENST00000557424 COL6A3P12111 3177 aa0.2□□□□□ -2.38
HMGB1P14-201ENST00000557424 TRPM2O94759 1503 aa0.2□□□□□ -2.38
HMGB1P14-201ENST00000557424 NFAT5O94916 1531 aa0.2□□□□□ -2.38
HMGB1P14-201ENST00000557424 ATP7AQ04656 1500 aa0.2□□□□□ -2.38
HMGB1P14-201ENST00000557424 SPRR2BP35325 72 aa0.2□□□□□ -2.38
HMGB1P14-201ENST00000557424 SMIM2Q9BVW6 85 aa0.2□□□□□ -2.38
HMGB1P14-201ENST00000557424 DMBT1Q9UGM3 2413 aaPredicted RBP0.2□□□□□ -2.38
HMGB1P14-201ENST00000557424 CELSR3Q9NYQ7 3312 aa0.2□□□□□ -2.38
HMGB1P14-201ENST00000557424 SSPOA2VEC9 5147 aa0.2□□□□□ -2.38
HMGB1P14-201ENST00000557424 TRIOO75962 3097 aa0.2□□□□□ -2.38
HMGB1P14-201ENST00000557424 ATMQ13315 3056 aa0.2□□□□□ -2.38
HMGB1P14-201ENST00000557424 FAT1Q14517 4588 aa0.2□□□□□ -2.38
HMGB1P14-201ENST00000557424 LRP1BQ9NZR2 4599 aa0.2□□□□□ -2.38
HMGB1P14-201ENST00000557424 CMYA5Q8N3K9 4069 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms