RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 NOTCH2NLQ7Z3S9 236 aa13.33□□□□□ -0.28
RCCD1-208ENST00000557266 PRO0628Q9UI54 55 aa13.33□□□□□ -0.28
RCCD1-208ENST00000557266 CIRBP-AS1Q8TBR5 109 aa13.31□□□□□ -0.28
RCCD1-208ENST00000557266 HYDINQ4G0P3 5121 aa13.31□□□□□ -0.28
RCCD1-208ENST00000557266 MRPL34Q9BQ48 92 aaKnown RBP13.29□□□□□ -0.28
RCCD1-208ENST00000557266 NDUFS5O43920 106 aa13.28□□□□□ -0.28
RCCD1-208ENST00000557266 SPINK6Q6UWN8 80 aa13.25□□□□□ -0.29
RCCD1-208ENST00000557266 SACSQ9NZJ4 4579 aa13.25□□□□□ -0.29
RCCD1-208ENST00000557266 BRK1Q8WUW1 75 aa13.24□□□□□ -0.29
RCCD1-208ENST00000557266 IGLV7-46A0A075B6I9 117 aa13.24□□□□□ -0.29
RCCD1-208ENST00000557266 PCOTHQ58A44 107 aa13.24□□□□□ -0.29
RCCD1-208ENST00000557266 CD164Q04900 197 aa13.22□□□□□ -0.29
RCCD1-208ENST00000557266 SSBP3-AS1Q7Z2R9 100 aa13.21□□□□□ -0.3
RCCD1-208ENST00000557266 PKD1P98161 4303 aa13.21□□□□□ -0.3
RCCD1-208ENST00000557266 FAT2Q9NYQ8 4349 aa13.18□□□□□ -0.3
RCCD1-208ENST00000557266 Q6ZSA8 131 aa13.18□□□□□ -0.3
RCCD1-208ENST00000557266 LRP1BQ9NZR2 4599 aa13.17□□□□□ -0.3
RCCD1-208ENST00000557266 PSPHP1O15172 72 aa13.17□□□□□ -0.3
RCCD1-208ENST00000557266 KRTAP10-1P60331 282 aa13.16□□□□□ -0.3
RCCD1-208ENST00000557266 COA5Q86WW8 74 aa13.13□□□□□ -0.31
RCCD1-208ENST00000557266 KRTAP13-2Q52LG2 175 aa13.12□□□□□ -0.31
RCCD1-208ENST00000557266 V9GYY9 64 aa13.12□□□□□ -0.31
RCCD1-208ENST00000557266 Q5W150 140 aa13.09□□□□□ -0.31
RCCD1-208ENST00000557266 Q8N9P0 234 aaPredicted RBP13.09□□□□□ -0.31
RCCD1-208ENST00000557266 A8MUN3 132 aa13.09□□□□□ -0.31
RCCD1-208ENST00000557266 KRTAP13-3Q3SY46 172 aa13.09□□□□□ -0.31
RCCD1-208ENST00000557266 C8orf87E5RJ46 101 aa13.05□□□□□ -0.32
RCCD1-208ENST00000557266 C1orf195Q5TG92 126 aa13.04□□□□□ -0.32
RCCD1-208ENST00000557266 LOC101927531A0A1B0GV80 90 aa13.03□□□□□ -0.32
RCCD1-208ENST00000557266 KMT2CQ8NEZ4 4911 aaKnown RBP13.02□□□□□ -0.33
RCCD1-208ENST00000557266 VPS13BQ7Z7G8 4022 aa13.02□□□□□ -0.33
RCCD1-208ENST00000557266 Q5VV11 94 aa13.01□□□□□ -0.33
RCCD1-208ENST00000557266 LIMD2Q9BT23 127 aa13□□□□□ -0.33
RCCD1-208ENST00000557266 KRTAP1-4P0C5Y4 121 aa13□□□□□ -0.33
RCCD1-208ENST00000557266 RYR2Q92736 4967 aa12.97□□□□□ -0.33
RCCD1-208ENST00000557266 LINC00313P59037 77 aa12.97□□□□□ -0.33
RCCD1-208ENST00000557266 HRES1P13985 223 aa12.95□□□□□ -0.34
RCCD1-208ENST00000557266 PRR15LQ9BU68 103 aa12.94□□□□□ -0.34
RCCD1-208ENST00000557266 PKHD1P08F94 4074 aa12.88□□□□□ -0.35
RCCD1-208ENST00000557266 KRTAP16-1A8MUX0 517 aa12.86□□□□□ -0.35
RCCD1-208ENST00000557266 FAM229AH3BQW9 127 aa12.86□□□□□ -0.35
RCCD1-208ENST00000557266 CHKB-CPT1BH3BT56 60 aa12.86□□□□□ -0.35
RCCD1-208ENST00000557266 SPAG11AQ6PDA7 123 aa12.85□□□□□ -0.35
RCCD1-208ENST00000557266 RETNLBQ9BQ08 111 aa12.83□□□□□ -0.35
RCCD1-208ENST00000557266 Q75L30 129 aa12.83□□□□□ -0.36
RCCD1-208ENST00000557266 A0A1B0GVY2 172 aa12.82□□□□□ -0.36
RCCD1-208ENST00000557266 PLA2G1BP04054 148 aaKnown RBP12.82□□□□□ -0.36
RCCD1-208ENST00000557266 A8MU10 97 aa12.81□□□□□ -0.36
RCCD1-208ENST00000557266 LINC01558Q9Y6Z2 57 aa12.81□□□□□ -0.36
RCCD1-208ENST00000557266 TYMSOSQ8TAI1 123 aa12.78□□□□□ -0.36
RCCD1-208ENST00000557266 IGKV2-30P06310 120 aa12.77□□□□□ -0.37
RCCD1-208ENST00000557266 C4orf48Q5BLP8 95 aa12.75□□□□□ -0.37
RCCD1-208ENST00000557266 PRR26Q8N8Z3 221 aa12.73□□□□□ -0.37
RCCD1-208ENST00000557266 DMAC1Q96GE9 116 aa12.73□□□□□ -0.37
RCCD1-208ENST00000557266 ACYP2P14621 99 aa12.73□□□□□ -0.37
RCCD1-208ENST00000557266 SPINK1P00995 79 aa12.72□□□□□ -0.37
RCCD1-208ENST00000557266 RYR3Q15413 4870 aa12.71□□□□□ -0.37
RCCD1-208ENST00000557266 A6NED7 52 aa12.68□□□□□ -0.38
RCCD1-208ENST00000557266 DYNC1H1Q14204 4646 aaKnown RBP12.67□□□□□ -0.38
RCCD1-208ENST00000557266 LCA10Q71F78 164 aa12.67□□□□□ -0.38
RCCD1-208ENST00000557266 LINC00304Q8N9R0 145 aa12.61□□□□□ -0.39
RCCD1-208ENST00000557266 IGKV2D-30A0A075B6S6 120 aa12.6□□□□□ -0.39
RCCD1-208ENST00000557266 SMR3BP02814 79 aaPredicted RBP12.58□□□□□ -0.4
RCCD1-208ENST00000557266 RPS29P62273 56 aaKnown RBP12.57□□□□□ -0.4
RCCD1-208ENST00000557266 SPINK7P58062 85 aa12.56□□□□□ -0.4
RCCD1-208ENST00000557266 APOBP04114 4563 aaKnown RBP12.56□□□□□ -0.4
RCCD1-208ENST00000557266 CDC42SE1Q9NRR8 79 aa12.55□□□□□ -0.4
RCCD1-208ENST00000557266 FAT1Q14517 4588 aa12.51□□□□□ -0.41
RCCD1-208ENST00000557266 PMAIP1Q13794 54 aa12.5□□□□□ -0.41
RCCD1-208ENST00000557266 SPTSSBQ8NFR3 76 aa12.5□□□□□ -0.41
RCCD1-208ENST00000557266 ATP11AUNQ6ZP68 121 aa12.49□□□□□ -0.41
RCCD1-208ENST00000557266 PKHD1L1Q86WI1 4243 aa12.49□□□□□ -0.41
RCCD1-208ENST00000557266 KRTAP10-4P60372 401 aaPredicted RBP12.47□□□□□ -0.41
RCCD1-208ENST00000557266 C7orf65Q6ZTY9 151 aa12.44□□□□□ -0.42
RCCD1-208ENST00000557266 A0A1B0GU69 56 aa12.35□□□□□ -0.43
RCCD1-208ENST00000557266 C9orf92A6NGG3 77 aa12.34□□□□□ -0.43
RCCD1-208ENST00000557266 A6NN06 94 aa12.33□□□□□ -0.44
RCCD1-208ENST00000557266 C20orf166-AS1Q96NR2 134 aa12.31□□□□□ -0.44
RCCD1-208ENST00000557266 Q8N1X5 172 aa12.3□□□□□ -0.44
RCCD1-208ENST00000557266 HSPG2P98160 4391 aa12.29□□□□□ -0.44
RCCD1-208ENST00000557266 A8MUU9 505 aa12.29□□□□□ -0.44
RCCD1-208ENST00000557266 EPPK1P58107 5090 aaKnown RBP12.24□□□□□ -0.45
RCCD1-208ENST00000557266 KTN1-AS1Q86SY8 53 aa12.22□□□□□ -0.45
RCCD1-208ENST00000557266 RYR1P21817 5038 aa12.2□□□□□ -0.46
RCCD1-208ENST00000557266 SPATA8Q6RVD6 105 aa12.15□□□□□ -0.46
RCCD1-208ENST00000557266 Q5VSD8 79 aa12.14□□□□□ -0.47
RCCD1-208ENST00000557266 KIAA1109Q2LD37 5005 aa12.13□□□□□ -0.47
RCCD1-208ENST00000557266 UQCR11O14957 56 aa12.11□□□□□ -0.47
RCCD1-208ENST00000557266 FLG2Q5D862 2391 aaPredicted RBP12.1□□□□□ -0.47
RCCD1-208ENST00000557266 KRTAP3-1Q9BYR8 98 aa12.09□□□□□ -0.47
RCCD1-208ENST00000557266 MIR22HGQ0VDD5 57 aa12.08□□□□□ -0.47
RCCD1-208ENST00000557266 TNXBP22105 4242 aa12.07□□□□□ -0.48
RCCD1-208ENST00000557266 KRTAP17-1Q9BYP8 105 aa12.05□□□□□ -0.48
RCCD1-208ENST00000557266 FAT3Q8TDW7 4589 aa12.04□□□□□ -0.48
RCCD1-208ENST00000557266 LRP1Q07954 4544 aaKnown RBP12.04□□□□□ -0.48
RCCD1-208ENST00000557266 SEC61GP60059 68 aa12.01□□□□□ -0.49
RCCD1-208ENST00000557266 KRTAP10-8P60410 259 aa11.96□□□□□ -0.5
RCCD1-208ENST00000557266 RBM12B-AS1Q9P1G2 102 aa11.87□□□□□ -0.51
RCCD1-208ENST00000557266 COX6B2Q6YFQ2 88 aa11.87□□□□□ -0.51
RCCD1-208ENST00000557266 MYCBP2O75592 4640 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms