RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 RBM3P98179 157 aaKnown RBP7.86□□□□□ -1.15
TUBB3-213ENST00000557262 VPS25Q9BRG1 176 aa7.86□□□□□ -1.15
TUBB3-213ENST00000557262 KRTAP10-10P60014 251 aa7.85□□□□□ -1.15
TUBB3-213ENST00000557262 PYY3Q5JQD4 70 aa7.85□□□□□ -1.15
TUBB3-213ENST00000557262 MTURNQ8N3F0 131 aa7.84□□□□□ -1.15
TUBB3-213ENST00000557262 DSCR8Q96T75 97 aa7.84□□□□□ -1.15
TUBB3-213ENST00000557262 LCE2BO14633 110 aa7.83□□□□□ -1.16
TUBB3-213ENST00000557262 SCGB1C2P0DMR2 95 aa7.83□□□□□ -1.16
TUBB3-213ENST00000557262 KRTAP9-3Q9BYQ3 159 aa7.83□□□□□ -1.16
TUBB3-213ENST00000557262 J3KT08 172 aa7.81□□□□□ -1.16
TUBB3-213ENST00000557262 C21orf62-AS1Q17RA5 79 aa7.81□□□□□ -1.16
TUBB3-213ENST00000557262 ZCCHC13Q8WW36 166 aaKnown RBP7.81□□□□□ -1.16
TUBB3-213ENST00000557262 FCGBPQ9Y6R7 5405 aaPredicted RBP7.81□□□□□ -1.16
TUBB3-213ENST00000557262 BAALC-AS2P0C853 105 aa7.79□□□□□ -1.16
TUBB3-213ENST00000557262 SPINK7P58062 85 aa7.79□□□□□ -1.16
TUBB3-213ENST00000557262 UQCR10Q9UDW1 63 aa7.79□□□□□ -1.16
TUBB3-213ENST00000557262 C9JAW5 83 aa7.78□□□□□ -1.16
TUBB3-213ENST00000557262 Q6ZQT0 140 aa7.77□□□□□ -1.17
TUBB3-213ENST00000557262 KRTAP19-1Q8IUB9 90 aa7.77□□□□□ -1.17
TUBB3-213ENST00000557262 NDUFB1O75438 58 aa7.76□□□□□ -1.17
TUBB3-213ENST00000557262 Q8N9P0 234 aaPredicted RBP7.75□□□□□ -1.17
TUBB3-213ENST00000557262 C8orf17Q9NRJ1 99 aa7.7□□□□□ -1.18
TUBB3-213ENST00000557262 A0A1B0GW54 56 aa7.69□□□□□ -1.18
TUBB3-213ENST00000557262 A8MWP4 228 aa7.69□□□□□ -1.18
TUBB3-213ENST00000557262 JMJD7-PLA2G4BH0Y9G9 81 aa7.69□□□□□ -1.18
TUBB3-213ENST00000557262 LYRM7Q5U5X0 104 aa7.69□□□□□ -1.18
TUBB3-213ENST00000557262 LOC110117498A0A087WWA1 95 aa7.66□□□□□ -1.18
TUBB3-213ENST00000557262 WFDC13Q8IUB5 93 aa7.66□□□□□ -1.18
TUBB3-213ENST00000557262 IGKV3D-7A0A0C4DH55 119 aa7.65□□□□□ -1.18
TUBB3-213ENST00000557262 PDE6GP18545 87 aa7.65□□□□□ -1.18
TUBB3-213ENST00000557262 ATXN8Q156A1 80 aa7.65□□□□□ -1.18
TUBB3-213ENST00000557262 LINC00846Q9NV44 126 aa7.64□□□□□ -1.19
TUBB3-213ENST00000557262 Q6ZVQ6 151 aa7.63□□□□□ -1.19
TUBB3-213ENST00000557262 PRR15Q8IV56 129 aa7.61□□□□□ -1.19
TUBB3-213ENST00000557262 NAA38Q9BRA0 125 aaKnown RBP7.6□□□□□ -1.19
TUBB3-213ENST00000557262 TMA7Q9Y2S6 64 aaKnown RBP7.6□□□□□ -1.19
TUBB3-213ENST00000557262 NREPQ16612 68 aa7.59□□□□□ -1.19
TUBB3-213ENST00000557262 KRTAP19-6Q3LI70 58 aa7.59□□□□□ -1.19
TUBB3-213ENST00000557262 C14orf132Q9NPU4 83 aa7.59□□□□□ -1.19
TUBB3-213ENST00000557262 MACF1Q9UPN3 7388 aaKnown RBP7.59□□□□□ -1.19
TUBB3-213ENST00000557262 M0R143 59 aa7.58□□□□□ -1.2
TUBB3-213ENST00000557262 TMEM254Q8TBM7 123 aa7.56□□□□□ -1.2
TUBB3-213ENST00000557262 MRPL34Q9BQ48 92 aaKnown RBP7.56□□□□□ -1.2
TUBB3-213ENST00000557262 MMP24-AS1A0A0U1RRL7 71 aa7.54□□□□□ -1.2
TUBB3-213ENST00000557262 H1FX-AS1Q4G0G2 97 aa7.54□□□□□ -1.2
TUBB3-213ENST00000557262 hDV103S1A0JD37 113 aa7.51□□□□□ -1.21
TUBB3-213ENST00000557262 NDUFS5O43920 106 aa7.5□□□□□ -1.21
TUBB3-213ENST00000557262 SYNE2Q8WXH0 6885 aaKnown RBP7.5□□□□□ -1.21
TUBB3-213ENST00000557262 K7EQZ3 153 aa7.47□□□□□ -1.21
TUBB3-213ENST00000557262 IGKV2D-30A0A075B6S6 120 aa7.43□□□□□ -1.22
TUBB3-213ENST00000557262 IGKV2-30P06310 120 aa7.43□□□□□ -1.22
TUBB3-213ENST00000557262 Q5W150 140 aa7.43□□□□□ -1.22
TUBB3-213ENST00000557262 BPY2O14599 106 aa7.41□□□□□ -1.22
TUBB3-213ENST00000557262 C7orf65Q6ZTY9 151 aa7.41□□□□□ -1.22
TUBB3-213ENST00000557262 H3BT86 120 aa7.4□□□□□ -1.22
TUBB3-213ENST00000557262 BATFQ16520 125 aa7.38□□□□□ -1.23
TUBB3-213ENST00000557262 SMIM6P0DI80 62 aa7.36□□□□□ -1.23
TUBB3-213ENST00000557262 KRTAP6-3Q3LI67 103 aa7.36□□□□□ -1.23
TUBB3-213ENST00000557262 C9orf118A6NHY6 69 aa7.35□□□□□ -1.23
TUBB3-213ENST00000557262 CASC2Q6XLA1 102 aa7.35□□□□□ -1.23
TUBB3-213ENST00000557262 HCG22E2RYF7 251 aa7.34□□□□□ -1.23
TUBB3-213ENST00000557262 TSTD3H0UI37 97 aa7.34□□□□□ -1.23
TUBB3-213ENST00000557262 C4orf26Q17RF5 130 aa7.34□□□□□ -1.23
TUBB3-213ENST00000557262 Q8N9L7 120 aa7.33□□□□□ -1.24
TUBB3-213ENST00000557262 A0A1W2PPM0 123 aa7.32□□□□□ -1.24
TUBB3-213ENST00000557262 TAX1BP3O14907 124 aa7.3□□□□□ -1.24
TUBB3-213ENST00000557262 CXCL6P80162 114 aa7.3□□□□□ -1.24
TUBB3-213ENST00000557262 C5orf47Q569G3 176 aa7.26□□□□□ -1.25
TUBB3-213ENST00000557262 FAM236AA0A1B0GUQ0 79 aa7.23□□□□□ -1.25
TUBB3-213ENST00000557262 FAM236BA0A1B0GV22 79 aa7.23□□□□□ -1.25
TUBB3-213ENST00000557262 KRTAP3-1Q9BYR8 98 aa7.23□□□□□ -1.25
TUBB3-213ENST00000557262 CSAG1Q6PB30 78 aa7.21□□□□□ -1.26
TUBB3-213ENST00000557262 UBL5Q9BZL1 73 aa7.2□□□□□ -1.26
TUBB3-213ENST00000557262 S4R3F8 94 aa7.2□□□□□ -1.26
TUBB3-213ENST00000557262 SMCPP49901 116 aaPredicted RBP7.19□□□□□ -1.26
TUBB3-213ENST00000557262 C1orf64Q8NEQ6 169 aa7.19□□□□□ -1.26
TUBB3-213ENST00000557262 SPCS1Q9Y6A9 102 aa7.19□□□□□ -1.26
TUBB3-213ENST00000557262 A6NN06 94 aa7.17□□□□□ -1.26
TUBB3-213ENST00000557262 MT1BP07438 61 aa7.17□□□□□ -1.26
TUBB3-213ENST00000557262 Q5VV11 94 aa7.16□□□□□ -1.26
TUBB3-213ENST00000557262 LCA10Q71F78 164 aa7.15□□□□□ -1.26
TUBB3-213ENST00000557262 SPRR2GQ9BYE4 73 aa7.15□□□□□ -1.26
TUBB3-213ENST00000557262 KRTAP19-8Q3LI54 63 aa7.14□□□□□ -1.27
TUBB3-213ENST00000557262 TP53AIP1Q9HCN2 124 aa7.12□□□□□ -1.27
TUBB3-213ENST00000557262 PRO0461Q9UI25 63 aa7.1□□□□□ -1.27
TUBB3-213ENST00000557262 NEBP20929 6669 aa7.09□□□□□ -1.27
TUBB3-213ENST00000557262 LOC105371267A0A1B0GV96 52 aa7.08□□□□□ -1.28
TUBB3-213ENST00000557262 MUC12Q9UKN1 5478 aa7.07□□□□□ -1.28
TUBB3-213ENST00000557262 KLKP1Q107X0 134 aa7.07□□□□□ -1.28
TUBB3-213ENST00000557262 KRTAP10-5P60370 271 aa7.06□□□□□ -1.28
TUBB3-213ENST00000557262 KRTAP3-3Q9BYR6 98 aa7.04□□□□□ -1.28
TUBB3-213ENST00000557262 K7EP34 96 aa7.03□□□□□ -1.28
TUBB3-213ENST00000557262 COL5A1-AS1Q5SY13 56 aa7.03□□□□□ -1.28
TUBB3-213ENST00000557262 CYP4F30PQ9H0H9 118 aa7.01□□□□□ -1.29
TUBB3-213ENST00000557262 CRIPTQ9P021 101 aa6.98□□□□□ -1.29
TUBB3-213ENST00000557262 A0A087WVE0 104 aa6.94□□□□□ -1.3
TUBB3-213ENST00000557262 F8W1H4 67 aa6.93□□□□□ -1.3
TUBB3-213ENST00000557262 LOC101927531A0A1B0GV80 90 aa6.92□□□□□ -1.3
TUBB3-213ENST00000557262 KRTAP5-9P26371 169 aa6.92□□□□□ -1.3
TUBB3-213ENST00000557262 GTF2H5Q6ZYL4 71 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms