RNA–Protein interactions for RNA: ENST00000557060.1

SYNE2-225, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 3,203 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-225ENST00000557060 KLKP1Q107X0 134 aa3.46□□□□□ -1.86
SYNE2-225ENST00000557060 TYMSOSQ8TAI1 123 aa3.46□□□□□ -1.86
SYNE2-225ENST00000557060 FAM236DA0A1B0GTK5 79 aa3.46□□□□□ -1.86
SYNE2-225ENST00000557060 FAM236CP0DP71 79 aa3.46□□□□□ -1.86
SYNE2-225ENST00000557060 MMP24-AS1A0A0U1RRL7 71 aa3.45□□□□□ -1.86
SYNE2-225ENST00000557060 LINC00336Q6ZUF6 198 aa3.45□□□□□ -1.86
SYNE2-225ENST00000557060 KRTAP1-4P0C5Y4 121 aa3.45□□□□□ -1.86
SYNE2-225ENST00000557060 A0A1B0GVX0 72 aa3.44□□□□□ -1.86
SYNE2-225ENST00000557060 J3KT08 172 aa3.44□□□□□ -1.86
SYNE2-225ENST00000557060 C8orf17Q9NRJ1 99 aa3.44□□□□□ -1.86
SYNE2-225ENST00000557060 A0A0U1RQV1 116 aa3.44□□□□□ -1.86
SYNE2-225ENST00000557060 KRTAP29-1A8MX34 341 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-225ENST00000557060 H0Y9P7 68 aa3.44□□□□□ -1.86
SYNE2-225ENST00000557060 MP68P56378 58 aa3.44□□□□□ -1.86
SYNE2-225ENST00000557060 PCOTHQ58A44 107 aa3.44□□□□□ -1.86
SYNE2-225ENST00000557060 SSBP3-AS1Q7Z2R9 100 aa3.44□□□□□ -1.86
SYNE2-225ENST00000557060 A0A1B0GVY2 172 aa3.42□□□□□ -1.86
SYNE2-225ENST00000557060 OXTP01178 125 aa3.42□□□□□ -1.86
SYNE2-225ENST00000557060 C5orf47Q569G3 176 aa3.42□□□□□ -1.86
SYNE2-225ENST00000557060 DYNC1H1Q14204 4646 aaKnown RBP3.42□□□□□ -1.86
SYNE2-225ENST00000557060 C1orf64Q8NEQ6 169 aa3.42□□□□□ -1.86
SYNE2-225ENST00000557060 RYR2Q92736 4967 aa3.41□□□□□ -1.86
SYNE2-225ENST00000557060 TRAV22A0A0B4J277 110 aa3.41□□□□□ -1.86
SYNE2-225ENST00000557060 C1orf195Q5TG92 126 aa3.41□□□□□ -1.86
SYNE2-225ENST00000557060 RYR3Q15413 4870 aa3.41□□□□□ -1.86
SYNE2-225ENST00000557060 MRPL34Q9BQ48 92 aaKnown RBP3.4□□□□□ -1.87
SYNE2-225ENST00000557060 NDUFC1O43677 76 aa3.39□□□□□ -1.87
SYNE2-225ENST00000557060 LINC00313P59037 77 aa3.39□□□□□ -1.87
SYNE2-225ENST00000557060 LINC00304Q8N9R0 145 aa3.39□□□□□ -1.87
SYNE2-225ENST00000557060 FAM229BQ4G0N7 80 aa3.39□□□□□ -1.87
SYNE2-225ENST00000557060 APOBP04114 4563 aaKnown RBP3.39□□□□□ -1.87
SYNE2-225ENST00000557060 MPLKIPQ8TAP9 179 aa3.38□□□□□ -1.87
SYNE2-225ENST00000557060 C9orf92A6NGG3 77 aa3.38□□□□□ -1.87
SYNE2-225ENST00000557060 CD164Q04900 197 aa3.38□□□□□ -1.87
SYNE2-225ENST00000557060 Q5W150 140 aa3.38□□□□□ -1.87
SYNE2-225ENST00000557060 LIMD2Q9BT23 127 aa3.37□□□□□ -1.87
SYNE2-225ENST00000557060 KIAA1109Q2LD37 5005 aa3.37□□□□□ -1.87
SYNE2-225ENST00000557060 LRP1Q07954 4544 aaKnown RBP3.36□□□□□ -1.87
SYNE2-225ENST00000557060 ZCCHC13Q8WW36 166 aaKnown RBP3.36□□□□□ -1.87
SYNE2-225ENST00000557060 SPINK1P00995 79 aa3.36□□□□□ -1.87
SYNE2-225ENST00000557060 Q5VSD8 79 aa3.36□□□□□ -1.87
SYNE2-225ENST00000557060 SERP1Q9Y6X1 66 aa3.36□□□□□ -1.87
SYNE2-225ENST00000557060 C4orf26Q17RF5 130 aa3.35□□□□□ -1.87
SYNE2-225ENST00000557060 MYCBP2O75592 4640 aa3.35□□□□□ -1.87
SYNE2-225ENST00000557060 TP53AIP1Q9HCN2 124 aa3.34□□□□□ -1.87
SYNE2-225ENST00000557060 IGKV2D-30A0A075B6S6 120 aa3.34□□□□□ -1.87
SYNE2-225ENST00000557060 IGKV2-30P06310 120 aa3.34□□□□□ -1.87
SYNE2-225ENST00000557060 KRTAP10-4P60372 401 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-225ENST00000557060 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
SYNE2-225ENST00000557060 RPS28P62857 69 aaKnown RBP3.33□□□□□ -1.88
SYNE2-225ENST00000557060 ASB16-AS1Q495Z4 193 aa3.33□□□□□ -1.88
SYNE2-225ENST00000557060 Q8N9P0 234 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-225ENST00000557060 KRTAP17-1Q9BYP8 105 aa3.32□□□□□ -1.88
SYNE2-225ENST00000557060 C8orf87E5RJ46 101 aa3.31□□□□□ -1.88
SYNE2-225ENST00000557060 FP248Q71RG6 208 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-225ENST00000557060 EPPK1P58107 5090 aaKnown RBP3.31□□□□□ -1.88
SYNE2-225ENST00000557060 ATP5EP56381 51 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-225ENST00000557060 Q8N1X5 172 aa3.31□□□□□ -1.88
SYNE2-225ENST00000557060 Q5XG85 94 aa3.3□□□□□ -1.88
SYNE2-225ENST00000557060 SMIM26A0A096LP01 95 aa3.29□□□□□ -1.88
SYNE2-225ENST00000557060 H3BPC8 53 aa3.29□□□□□ -1.88
SYNE2-225ENST00000557060 PSPHP1O15172 72 aa3.29□□□□□ -1.88
SYNE2-225ENST00000557060 SPAG11AQ6PDA7 123 aa3.29□□□□□ -1.88
SYNE2-225ENST00000557060 KRTAP16-1A8MUX0 517 aa3.29□□□□□ -1.88
SYNE2-225ENST00000557060 FAT3Q8TDW7 4589 aa3.29□□□□□ -1.88
SYNE2-225ENST00000557060 CYP4F30PQ9H0H9 118 aa3.29□□□□□ -1.88
SYNE2-225ENST00000557060 HSPG2P98160 4391 aa3.28□□□□□ -1.88
SYNE2-225ENST00000557060 LOC101927531A0A1B0GV80 90 aa3.27□□□□□ -1.89
SYNE2-225ENST00000557060 HRES1P13985 223 aa3.27□□□□□ -1.89
SYNE2-225ENST00000557060 COA5Q86WW8 74 aa3.27□□□□□ -1.89
SYNE2-225ENST00000557060 IGLV7-46A0A075B6I9 117 aa3.26□□□□□ -1.89
SYNE2-225ENST00000557060 KRTAP13-3Q3SY46 172 aa3.26□□□□□ -1.89
SYNE2-225ENST00000557060 KRTAP23-1A1A580 65 aa3.25□□□□□ -1.89
SYNE2-225ENST00000557060 SPANXA2-OT1Q8N9U9 137 aa3.25□□□□□ -1.89
SYNE2-225ENST00000557060 PKHD1L1Q86WI1 4243 aa3.25□□□□□ -1.89
SYNE2-225ENST00000557060 KRTAP4-5Q9BYR2 181 aa3.25□□□□□ -1.89
SYNE2-225ENST00000557060 XP32Q5T750 250 aa3.24□□□□□ -1.89
SYNE2-225ENST00000557060 RYR1P21817 5038 aa3.24□□□□□ -1.89
SYNE2-225ENST00000557060 CHKB-CPT1BH3BT56 60 aa3.23□□□□□ -1.89
SYNE2-225ENST00000557060 A8MUN3 132 aa3.23□□□□□ -1.89
SYNE2-225ENST00000557060 C7orf65Q6ZTY9 151 aa3.23□□□□□ -1.89
SYNE2-225ENST00000557060 BRK1Q8WUW1 75 aa3.23□□□□□ -1.89
SYNE2-225ENST00000557060 RPS29P62273 56 aaKnown RBP3.22□□□□□ -1.89
SYNE2-225ENST00000557060 KRTAP10-8P60410 259 aa3.21□□□□□ -1.89
SYNE2-225ENST00000557060 PRR15LQ9BU68 103 aa3.21□□□□□ -1.89
SYNE2-225ENST00000557060 ACYP2P14621 99 aa3.2□□□□□ -1.9
SYNE2-225ENST00000557060 KRTAP3-1Q9BYR8 98 aa3.2□□□□□ -1.9
SYNE2-225ENST00000557060 SPINK7P58062 85 aa3.19□□□□□ -1.9
SYNE2-225ENST00000557060 LOC100996750A0A140TA64 210 aa3.19□□□□□ -1.9
SYNE2-225ENST00000557060 KRTAP4-6Q9BYQ5 205 aa3.19□□□□□ -1.9
SYNE2-225ENST00000557060 MT1HL1P0DM35 61 aa3.18□□□□□ -1.9
SYNE2-225ENST00000557060 ABCA13Q86UQ4 5058 aa3.18□□□□□ -1.9
SYNE2-225ENST00000557060 ATP11AUNQ6ZP68 121 aa3.18□□□□□ -1.9
SYNE2-225ENST00000557060 C20orf166-AS1Q96NR2 134 aa3.17□□□□□ -1.9
SYNE2-225ENST00000557060 A8MU10 97 aa3.17□□□□□ -1.9
SYNE2-225ENST00000557060 A8MUU9 505 aa3.17□□□□□ -1.9
SYNE2-225ENST00000557060 Q1T7F1 81 aa3.17□□□□□ -1.9
SYNE2-225ENST00000557060 DMAC1Q96GE9 116 aa3.17□□□□□ -1.9
SYNE2-225ENST00000557060 TNXBP22105 4242 aa3.17□□□□□ -1.9
SYNE2-225ENST00000557060 A6NED7 52 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms