RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
PSEN1-220ENST00000557037 IGKV3D-7A0A0C4DH55 119 aa5.27□□□□□ -1.57
PSEN1-220ENST00000557037 TRGC2P03986 189 aa5.26□□□□□ -1.57
PSEN1-220ENST00000557037 DSCR8Q96T75 97 aa5.26□□□□□ -1.57
PSEN1-220ENST00000557037 SYS1-DBNDD2H3BUS1 97 aa5.25□□□□□ -1.57
PSEN1-220ENST00000557037 KLKP1Q107X0 134 aa5.25□□□□□ -1.57
PSEN1-220ENST00000557037 CLLU1Q5K131 121 aa5.25□□□□□ -1.57
PSEN1-220ENST00000557037 TRBV7-4A0A0J9YYF1 115 aa5.23□□□□□ -1.57
PSEN1-220ENST00000557037 KRTAP3-1Q9BYR8 98 aa5.23□□□□□ -1.57
PSEN1-220ENST00000557037 A0A1B0GV72 72 aa5.22□□□□□ -1.57
PSEN1-220ENST00000557037 FABP2P12104 132 aa5.22□□□□□ -1.57
PSEN1-220ENST00000557037 MT1XP80297 61 aa5.22□□□□□ -1.57
PSEN1-220ENST00000557037 BVES-AS1Q5T3Y7 98 aa5.22□□□□□ -1.57
PSEN1-220ENST00000557037 PRO2289Q9P1D8 64 aa5.22□□□□□ -1.57
PSEN1-220ENST00000557037 LINC01545Q5VT33 79 aa5.21□□□□□ -1.58
PSEN1-220ENST00000557037 ANKRD29Q8N6D5 301 aa5.21□□□□□ -1.58
PSEN1-220ENST00000557037 YPEL4Q96NS1 127 aa5.21□□□□□ -1.58
PSEN1-220ENST00000557037 LCE1DQ5T752 114 aa5.19□□□□□ -1.58
PSEN1-220ENST00000557037 KRTAP5-10Q6L8G5 202 aa5.19□□□□□ -1.58
PSEN1-220ENST00000557037 KRTAP12-2P59991 146 aa5.18□□□□□ -1.58
PSEN1-220ENST00000557037 CSAG1Q6PB30 78 aa5.17□□□□□ -1.58
PSEN1-220ENST00000557037 LCA10Q71F78 164 aa5.17□□□□□ -1.58
PSEN1-220ENST00000557037 IGKV2D-30A0A075B6S6 120 aa5.16□□□□□ -1.58
PSEN1-220ENST00000557037 TRACP01848 142 aa5.16□□□□□ -1.58
PSEN1-220ENST00000557037 IGKV2-30P06310 120 aa5.16□□□□□ -1.58
PSEN1-220ENST00000557037 TRIAP1O43715 76 aa5.14□□□□□ -1.59
PSEN1-220ENST00000557037 SNCGO76070 127 aa5.14□□□□□ -1.59
PSEN1-220ENST00000557037 CCKP06307 115 aa5.14□□□□□ -1.59
PSEN1-220ENST00000557037 C4orf26Q17RF5 130 aa5.14□□□□□ -1.59
PSEN1-220ENST00000557037 PET117Q6UWS5 81 aa5.14□□□□□ -1.59
PSEN1-220ENST00000557037 PRR15Q8IV56 129 aa5.14□□□□□ -1.59
PSEN1-220ENST00000557037 APOC3P02656 99 aa5.13□□□□□ -1.59
PSEN1-220ENST00000557037 RBM3P98179 157 aaKnown RBP5.13□□□□□ -1.59
PSEN1-220ENST00000557037 C8orf17Q9NRJ1 99 aa5.13□□□□□ -1.59
PSEN1-220ENST00000557037 S4R3F8 94 aa5.13□□□□□ -1.59
PSEN1-220ENST00000557037 LCE4AQ5TA78 99 aa5.12□□□□□ -1.59
PSEN1-220ENST00000557037 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
PSEN1-220ENST00000557037 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
PSEN1-220ENST00000557037 NDUFB1O75438 58 aa5.09□□□□□ -1.59
PSEN1-220ENST00000557037 SNAPINO95295 136 aa5.09□□□□□ -1.59
PSEN1-220ENST00000557037 CRIPTQ9P021 101 aa5.09□□□□□ -1.59
PSEN1-220ENST00000557037 J3KT08 172 aa5.08□□□□□ -1.6
PSEN1-220ENST00000557037 MT4P47944 62 aa5.08□□□□□ -1.6
PSEN1-220ENST00000557037 Q6ZVQ6 151 aa5.08□□□□□ -1.6
PSEN1-220ENST00000557037 ATOH7Q8N100 152 aa5.08□□□□□ -1.6
PSEN1-220ENST00000557037 SVIPQ8NHG7 77 aa5.08□□□□□ -1.6
PSEN1-220ENST00000557037 VPS25Q9BRG1 176 aa5.08□□□□□ -1.6
PSEN1-220ENST00000557037 KRTAP5-7Q6L8G8 165 aa5.07□□□□□ -1.6
PSEN1-220ENST00000557037 C2orf91Q6ZV80 131 aa5.07□□□□□ -1.6
PSEN1-220ENST00000557037 H0YGX0 51 aa5.06□□□□□ -1.6
PSEN1-220ENST00000557037 C7orf65Q6ZTY9 151 aa5.06□□□□□ -1.6
PSEN1-220ENST00000557037 SVBPQ8N300 66 aa5.05□□□□□ -1.6
PSEN1-220ENST00000557037 SPRR5A0A1B0GTR4 108 aa5.04□□□□□ -1.6
PSEN1-220ENST00000557037 KRTDAPP60985 99 aa5.03□□□□□ -1.6
PSEN1-220ENST00000557037 NDUFS5O43920 106 aa5.01□□□□□ -1.61
PSEN1-220ENST00000557037 NDUFA5Q16718 116 aa5□□□□□ -1.61
PSEN1-220ENST00000557037 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
PSEN1-220ENST00000557037 Q5W150 140 aa4.99□□□□□ -1.61
PSEN1-220ENST00000557037 PLAC4Q8WY50 150 aa4.99□□□□□ -1.61
PSEN1-220ENST00000557037 MRPL34Q9BQ48 92 aaKnown RBP4.98□□□□□ -1.61
PSEN1-220ENST00000557037 A0A1B0GX51 115 aa4.97□□□□□ -1.61
PSEN1-220ENST00000557037 TMEM254Q8TBM7 123 aa4.96□□□□□ -1.62
PSEN1-220ENST00000557037 ORMDL1Q9P0S3 153 aa4.95□□□□□ -1.62
PSEN1-220ENST00000557037 HIST1H4GQ99525 98 aa4.94□□□□□ -1.62
PSEN1-220ENST00000557037 MMP24-AS1A0A0U1RRL7 71 aa4.93□□□□□ -1.62
PSEN1-220ENST00000557037 A8MUN3 132 aa4.92□□□□□ -1.62
PSEN1-220ENST00000557037 K7EQZ3 153 aa4.92□□□□□ -1.62
PSEN1-220ENST00000557037 KRTAP10-12P60413 245 aa4.92□□□□□ -1.62
PSEN1-220ENST00000557037 Q6ZQT0 140 aa4.92□□□□□ -1.62
PSEN1-220ENST00000557037 C1orf64Q8NEQ6 169 aa4.92□□□□□ -1.62
PSEN1-220ENST00000557037 DNAL4O96015 105 aa4.9□□□□□ -1.63
PSEN1-220ENST00000557037 TMEM256-PLSCR3K7ERE1 68 aa4.89□□□□□ -1.63
PSEN1-220ENST00000557037 HIST1H2BKO60814 126 aa4.89□□□□□ -1.63
PSEN1-220ENST00000557037 HIST1H2BJP06899 126 aa4.89□□□□□ -1.63
PSEN1-220ENST00000557037 HIST1H2BOP23527 126 aa4.89□□□□□ -1.63
PSEN1-220ENST00000557037 HIST1H2BBP33778 126 aa4.89□□□□□ -1.63
PSEN1-220ENST00000557037 HIST1H2BDP58876 126 aa4.89□□□□□ -1.63
PSEN1-220ENST00000557037 HIST1H2BCP62807 126 aa4.89□□□□□ -1.63
PSEN1-220ENST00000557037 HIST2H2BEQ16778 126 aa4.89□□□□□ -1.63
PSEN1-220ENST00000557037 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.89□□□□□ -1.63
PSEN1-220ENST00000557037 KRTAP5-3Q6L8H2 238 aa4.89□□□□□ -1.63
PSEN1-220ENST00000557037 HIST1H2BHQ93079 126 aa4.89□□□□□ -1.63
PSEN1-220ENST00000557037 HIST1H2BNQ99877 126 aa4.89□□□□□ -1.63
PSEN1-220ENST00000557037 HIST1H2BMQ99879 126 aa4.89□□□□□ -1.63
PSEN1-220ENST00000557037 hDV103S1A0JD37 113 aa4.88□□□□□ -1.63
PSEN1-220ENST00000557037 PDE6GP18545 87 aa4.88□□□□□ -1.63
PSEN1-220ENST00000557037 LCE5AQ5TCM9 118 aa4.88□□□□□ -1.63
PSEN1-220ENST00000557037 H3BQ85 93 aa4.87□□□□□ -1.63
PSEN1-220ENST00000557037 SNRPEP62304 92 aaKnown RBP4.86□□□□□ -1.63
PSEN1-220ENST00000557037 A0A0B4J2C4 111 aa4.84□□□□□ -1.63
PSEN1-220ENST00000557037 UBE2V1Q13404 147 aa4.84□□□□□ -1.63
PSEN1-220ENST00000557037 C9JAW5 83 aa4.81□□□□□ -1.64
PSEN1-220ENST00000557037 KRTAP4-7Q9BYR0 210 aa4.8□□□□□ -1.64
PSEN1-220ENST00000557037 A0A087WVE0 104 aa4.79□□□□□ -1.64
PSEN1-220ENST00000557037 HSBP1L1C9JCN9 74 aa4.79□□□□□ -1.64
PSEN1-220ENST00000557037 PRO1854Q9UHT4 67 aa4.78□□□□□ -1.64
PSEN1-220ENST00000557037 AHNAKQ09666 5890 aaKnown RBP4.77□□□□□ -1.65
PSEN1-220ENST00000557037 KRTAP19-3Q7Z4W3 81 aa4.77□□□□□ -1.65
PSEN1-220ENST00000557037 CEND1Q8N111 149 aa4.77□□□□□ -1.65
PSEN1-220ENST00000557037 HCG22E2RYF7 251 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms