RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 UBE2BP63146 152 aa2.91□□□□□ -1.94
ATXN3-246ENST00000557030 FAM229BQ4G0N7 80 aa2.91□□□□□ -1.94
ATXN3-246ENST00000557030 PRR15Q8IV56 129 aa2.91□□□□□ -1.94
ATXN3-246ENST00000557030 Q9BRP9 147 aa2.91□□□□□ -1.94
ATXN3-246ENST00000557030 PKIGQ9Y2B9 76 aa2.91□□□□□ -1.94
ATXN3-246ENST00000557030 DYNC2H1Q8NCM8 4307 aaKnown RBP2.9□□□□□ -1.95
ATXN3-246ENST00000557030 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.9□□□□□ -1.95
ATXN3-246ENST00000557030 DEFB131BA0A096LNP1 70 aa2.9□□□□□ -1.95
ATXN3-246ENST00000557030 K7EQZ3 153 aa2.9□□□□□ -1.95
ATXN3-246ENST00000557030 PSCAO43653 123 aa2.9□□□□□ -1.95
ATXN3-246ENST00000557030 MRPL55Q7Z7F7 128 aaKnown RBP2.9□□□□□ -1.95
ATXN3-246ENST00000557030 C1orf64Q8NEQ6 169 aa2.9□□□□□ -1.95
ATXN3-246ENST00000557030 ANAPC11Q9NYG5 84 aa2.9□□□□□ -1.95
ATXN3-246ENST00000557030 SACSQ9NZJ4 4579 aa2.9□□□□□ -1.95
ATXN3-246ENST00000557030 RYR2Q92736 4967 aa2.9□□□□□ -1.95
ATXN3-246ENST00000557030 DNAH1Q9P2D7 4330 aa2.89□□□□□ -1.95
ATXN3-246ENST00000557030 SPANXA2-OT1Q8N9U9 137 aa2.89□□□□□ -1.95
ATXN3-246ENST00000557030 DNAH9Q9NYC9 4486 aa2.89□□□□□ -1.95
ATXN3-246ENST00000557030 HUWE1Q7Z6Z7 4374 aaKnown RBP2.89□□□□□ -1.95
ATXN3-246ENST00000557030 TRAV22A0A0B4J277 110 aa2.88□□□□□ -1.95
ATXN3-246ENST00000557030 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
ATXN3-246ENST00000557030 ST20-AS1Q8NBB2 130 aa2.88□□□□□ -1.95
ATXN3-246ENST00000557030 B9D2Q9BPU9 175 aa2.88□□□□□ -1.95
ATXN3-246ENST00000557030 H0Y9J4 135 aa2.87□□□□□ -1.95
ATXN3-246ENST00000557030 IGFL1Q6UW32 110 aa2.87□□□□□ -1.95
ATXN3-246ENST00000557030 LIMD2Q9BT23 127 aa2.87□□□□□ -1.95
ATXN3-246ENST00000557030 LINC00588Q9Y4M8 146 aa2.87□□□□□ -1.95
ATXN3-246ENST00000557030 H0Y9P7 68 aa2.86□□□□□ -1.95
ATXN3-246ENST00000557030 UBE2AP49459 152 aa2.86□□□□□ -1.95
ATXN3-246ENST00000557030 CASC2Q6XLA1 102 aa2.86□□□□□ -1.95
ATXN3-246ENST00000557030 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
ATXN3-246ENST00000557030 LINC00208Q96KT6 92 aa2.86□□□□□ -1.95
ATXN3-246ENST00000557030 TENM3Q9P273 2699 aa2.86□□□□□ -1.95
ATXN3-246ENST00000557030 A0A087WSZ3 146 aa2.85□□□□□ -1.95
ATXN3-246ENST00000557030 A8MWP4 228 aa2.85□□□□□ -1.95
ATXN3-246ENST00000557030 C16orf90A8MZG2 172 aa2.85□□□□□ -1.95
ATXN3-246ENST00000557030 K7EIL1 84 aa2.85□□□□□ -1.95
ATXN3-246ENST00000557030 RTL8CO15255 209 aa2.85□□□□□ -1.95
ATXN3-246ENST00000557030 PRB2P02812 416 aaPredicted RBP2.85□□□□□ -1.95
ATXN3-246ENST00000557030 SPRR1BP22528 89 aa2.85□□□□□ -1.95
ATXN3-246ENST00000557030 PMAIP1Q13794 54 aa2.85□□□□□ -1.95
ATXN3-246ENST00000557030 WFDC13Q8IUB5 93 aa2.85□□□□□ -1.95
ATXN3-246ENST00000557030 KIAA1109Q2LD37 5005 aa2.85□□□□□ -1.95
ATXN3-246ENST00000557030 LRCOL1A6NCL2 159 aa2.84□□□□□ -1.95
ATXN3-246ENST00000557030 CNBPP62633 177 aaKnown RBP2.84□□□□□ -1.95
ATXN3-246ENST00000557030 PSPHP1O15172 72 aa2.83□□□□□ -1.96
ATXN3-246ENST00000557030 CASC10Q5T4H9 136 aa2.83□□□□□ -1.96
ATXN3-246ENST00000557030 TP53AIP1Q9HCN2 124 aa2.83□□□□□ -1.96
ATXN3-246ENST00000557030 HERC2O95714 4834 aa2.82□□□□□ -1.96
ATXN3-246ENST00000557030 A8MUN3 132 aa2.82□□□□□ -1.96
ATXN3-246ENST00000557030 RPL37AP61513 92 aaKnown RBP2.82□□□□□ -1.96
ATXN3-246ENST00000557030 Q5VV11 94 aa2.82□□□□□ -1.96
ATXN3-246ENST00000557030 C9orf163Q8N9P6 203 aa2.82□□□□□ -1.96
ATXN3-246ENST00000557030 LINC00472Q9H8W2 130 aa2.82□□□□□ -1.96
ATXN3-246ENST00000557030 TENM2Q9NT68 2774 aa2.81□□□□□ -1.96
ATXN3-246ENST00000557030 COL7A1Q02388 2944 aa2.81□□□□□ -1.96
ATXN3-246ENST00000557030 A0A096LNI7 61 aa2.81□□□□□ -1.96
ATXN3-246ENST00000557030 LOC101927531A0A1B0GV80 90 aa2.81□□□□□ -1.96
ATXN3-246ENST00000557030 CHKB-CPT1BH3BT56 60 aa2.81□□□□□ -1.96
ATXN3-246ENST00000557030 CHTF8P0CG12 524 aa2.81□□□□□ -1.96
ATXN3-246ENST00000557030 PRLHP81277 87 aa2.81□□□□□ -1.96
ATXN3-246ENST00000557030 MOBPQ13875 183 aa2.81□□□□□ -1.96
ATXN3-246ENST00000557030 IGKV2-24A0A0C4DH68 120 aa2.8□□□□□ -1.96
ATXN3-246ENST00000557030 MMP24-AS1A0A0U1RRL7 71 aa2.8□□□□□ -1.96
ATXN3-246ENST00000557030 NDUFS5O43920 106 aa2.8□□□□□ -1.96
ATXN3-246ENST00000557030 CD164Q04900 197 aa2.8□□□□□ -1.96
ATXN3-246ENST00000557030 DEFB116Q30KQ4 102 aa2.8□□□□□ -1.96
ATXN3-246ENST00000557030 ATP11AUNQ6ZP68 121 aa2.8□□□□□ -1.96
ATXN3-246ENST00000557030 COA5Q86WW8 74 aa2.8□□□□□ -1.96
ATXN3-246ENST00000557030 PRR15LQ9BU68 103 aa2.8□□□□□ -1.96
ATXN3-246ENST00000557030 A0A1W2PNN7 141 aa2.79□□□□□ -1.96
ATXN3-246ENST00000557030 ZNF706Q9Y5V0 76 aaPredicted RBP2.79□□□□□ -1.96
ATXN3-246ENST00000557030 VPS13DQ5THJ4 4388 aa2.79□□□□□ -1.96
ATXN3-246ENST00000557030 LYSTQ99698 3801 aa2.79□□□□□ -1.96
ATXN3-246ENST00000557030 DNAH10Q8IVF4 4471 aa2.78□□□□□ -1.96
ATXN3-246ENST00000557030 A0A0G2JQZ4 141 aa2.78□□□□□ -1.96
ATXN3-246ENST00000557030 A6NED7 52 aa2.78□□□□□ -1.96
ATXN3-246ENST00000557030 ASB16-AS1Q495Z4 193 aa2.78□□□□□ -1.96
ATXN3-246ENST00000557030 KTN1-AS1Q86SY8 53 aa2.78□□□□□ -1.96
ATXN3-246ENST00000557030 CDC42SE1Q9NRR8 79 aa2.78□□□□□ -1.96
ATXN3-246ENST00000557030 APLNQ9ULZ1 77 aa2.78□□□□□ -1.96
ATXN3-246ENST00000557030 LINC01558Q9Y6Z2 57 aa2.78□□□□□ -1.96
ATXN3-246ENST00000557030 DNAH7Q8WXX0 4024 aa2.78□□□□□ -1.96
ATXN3-246ENST00000557030 PHF5AQ7RTV0 110 aaKnown RBP2.77□□□□□ -1.97
ATXN3-246ENST00000557030 UBE2DNLQ8IWF7 75 aa2.77□□□□□ -1.97
ATXN3-246ENST00000557030 C8orf17Q9NRJ1 99 aa2.77□□□□□ -1.97
ATXN3-246ENST00000557030 PLECQ15149 4684 aaKnown RBP2.77□□□□□ -1.97
ATXN3-246ENST00000557030 CSMD3Q7Z407 3707 aa2.76□□□□□ -1.97
ATXN3-246ENST00000557030 LINC00483Q53H64 154 aa2.76□□□□□ -1.97
ATXN3-246ENST00000557030 KRTAP13-1Q8IUC0 172 aa2.76□□□□□ -1.97
ATXN3-246ENST00000557030 A0A1B0GVX0 72 aa2.75□□□□□ -1.97
ATXN3-246ENST00000557030 PCOTHQ58A44 107 aa2.75□□□□□ -1.97
ATXN3-246ENST00000557030 SPTSSBQ8NFR3 76 aa2.75□□□□□ -1.97
ATXN3-246ENST00000557030 Q96NJ1 140 aa2.75□□□□□ -1.97
ATXN3-246ENST00000557030 MRPL34Q9BQ48 92 aaKnown RBP2.75□□□□□ -1.97
ATXN3-246ENST00000557030 PLAC8Q9NZF1 115 aa2.75□□□□□ -1.97
ATXN3-246ENST00000557030 DNAH17Q9UFH2 4485 aa2.75□□□□□ -1.97
ATXN3-246ENST00000557030 STARD9Q9P2P6 4700 aa2.74□□□□□ -1.97
ATXN3-246ENST00000557030 A6NN06 94 aa2.74□□□□□ -1.97
ATXN3-246ENST00000557030 LCA10Q71F78 164 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms