RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 SSBP3-AS1Q7Z2R9 100 aa5.89□□□□□ -1.47
TMEM260-211ENST00000556648 LINC00208Q96KT6 92 aa5.89□□□□□ -1.47
TMEM260-211ENST00000556648 ATP5EP56381 51 aaPredicted RBP5.89□□□□□ -1.47
TMEM260-211ENST00000556648 CDK2AP2O75956 126 aa5.88□□□□□ -1.47
TMEM260-211ENST00000556648 MP68P56378 58 aa5.88□□□□□ -1.47
TMEM260-211ENST00000556648 LCE2CQ5TA81 110 aa5.88□□□□□ -1.47
TMEM260-211ENST00000556648 CD164Q04900 197 aa5.87□□□□□ -1.47
TMEM260-211ENST00000556648 TRAV22A0A0B4J277 110 aa5.87□□□□□ -1.47
TMEM260-211ENST00000556648 PRR4Q16378 134 aa5.87□□□□□ -1.47
TMEM260-211ENST00000556648 VPS13BQ7Z7G8 4022 aa5.87□□□□□ -1.47
TMEM260-211ENST00000556648 FAM229BQ4G0N7 80 aa5.86□□□□□ -1.47
TMEM260-211ENST00000556648 Q5XG85 94 aa5.86□□□□□ -1.47
TMEM260-211ENST00000556648 PKHD1P08F94 4074 aa5.86□□□□□ -1.47
TMEM260-211ENST00000556648 A0A1B0GVY2 172 aa5.84□□□□□ -1.47
TMEM260-211ENST00000556648 NDUFS5O43920 106 aa5.84□□□□□ -1.48
TMEM260-211ENST00000556648 C1orf64Q8NEQ6 169 aa5.84□□□□□ -1.48
TMEM260-211ENST00000556648 MRPL34Q9BQ48 92 aaKnown RBP5.84□□□□□ -1.48
TMEM260-211ENST00000556648 SMR3BP02814 79 aaPredicted RBP5.83□□□□□ -1.48
TMEM260-211ENST00000556648 C4orf26Q17RF5 130 aa5.82□□□□□ -1.48
TMEM260-211ENST00000556648 FP248Q71RG6 208 aaPredicted RBP5.82□□□□□ -1.48
TMEM260-211ENST00000556648 LCE2AQ5TA79 106 aaPredicted RBP5.82□□□□□ -1.48
TMEM260-211ENST00000556648 C1orf195Q5TG92 126 aa5.82□□□□□ -1.48
TMEM260-211ENST00000556648 LINC00336Q6ZUF6 198 aa5.82□□□□□ -1.48
TMEM260-211ENST00000556648 RYR2Q92736 4967 aa5.82□□□□□ -1.48
TMEM260-211ENST00000556648 H3BPC8 53 aa5.81□□□□□ -1.48
TMEM260-211ENST00000556648 DYNC1H1Q14204 4646 aaKnown RBP5.81□□□□□ -1.48
TMEM260-211ENST00000556648 PLA2G1BP04054 148 aaKnown RBP5.81□□□□□ -1.48
TMEM260-211ENST00000556648 TP53AIP1Q9HCN2 124 aa5.8□□□□□ -1.48
TMEM260-211ENST00000556648 PCOTHQ58A44 107 aa5.79□□□□□ -1.48
TMEM260-211ENST00000556648 SMIM26A0A096LP01 95 aa5.78□□□□□ -1.48
TMEM260-211ENST00000556648 TYMSOSQ8TAI1 123 aa5.78□□□□□ -1.48
TMEM260-211ENST00000556648 CYP4F30PQ9H0H9 118 aa5.78□□□□□ -1.48
TMEM260-211ENST00000556648 Q5W150 140 aa5.77□□□□□ -1.49
TMEM260-211ENST00000556648 PRR26Q8N8Z3 221 aa5.77□□□□□ -1.49
TMEM260-211ENST00000556648 C8orf87E5RJ46 101 aa5.76□□□□□ -1.49
TMEM260-211ENST00000556648 KRTAP10-4P60372 401 aaPredicted RBP5.76□□□□□ -1.49
TMEM260-211ENST00000556648 KRTAP13-3Q3SY46 172 aa5.75□□□□□ -1.49
TMEM260-211ENST00000556648 SVIPQ8NHG7 77 aa5.75□□□□□ -1.49
TMEM260-211ENST00000556648 LINC00313P59037 77 aa5.74□□□□□ -1.49
TMEM260-211ENST00000556648 MPLKIPQ8TAP9 179 aa5.74□□□□□ -1.49
TMEM260-211ENST00000556648 SPANXA2-OT1Q8N9U9 137 aa5.74□□□□□ -1.49
TMEM260-211ENST00000556648 LIMD2Q9BT23 127 aa5.74□□□□□ -1.49
TMEM260-211ENST00000556648 APOBP04114 4563 aaKnown RBP5.73□□□□□ -1.49
TMEM260-211ENST00000556648 KRTAP16-1A8MUX0 517 aa5.73□□□□□ -1.49
TMEM260-211ENST00000556648 RETNLBQ9BQ08 111 aa5.73□□□□□ -1.49
TMEM260-211ENST00000556648 LORP23490 312 aaPredicted RBP5.72□□□□□ -1.49
TMEM260-211ENST00000556648 KMT2CQ8NEZ4 4911 aaKnown RBP5.71□□□□□ -1.49
TMEM260-211ENST00000556648 LINC00304Q8N9R0 145 aa5.7□□□□□ -1.5
TMEM260-211ENST00000556648 IGLV7-46A0A075B6I9 117 aa5.7□□□□□ -1.5
TMEM260-211ENST00000556648 SPINK1P00995 79 aa5.7□□□□□ -1.5
TMEM260-211ENST00000556648 FAM229AH3BQW9 127 aa5.69□□□□□ -1.5
TMEM260-211ENST00000556648 Q8N9P0 234 aaPredicted RBP5.69□□□□□ -1.5
TMEM260-211ENST00000556648 LOC101927531A0A1B0GV80 90 aa5.67□□□□□ -1.5
TMEM260-211ENST00000556648 FAT1Q14517 4588 aa5.66□□□□□ -1.5
TMEM260-211ENST00000556648 COA5Q86WW8 74 aa5.65□□□□□ -1.5
TMEM260-211ENST00000556648 PKHD1L1Q86WI1 4243 aa5.64□□□□□ -1.51
TMEM260-211ENST00000556648 RPS29P62273 56 aaKnown RBP5.62□□□□□ -1.51
TMEM260-211ENST00000556648 Q1T7F1 81 aa5.62□□□□□ -1.51
TMEM260-211ENST00000556648 IGKV2-30P06310 120 aa5.62□□□□□ -1.51
TMEM260-211ENST00000556648 SPAG11AQ6PDA7 123 aa5.62□□□□□ -1.51
TMEM260-211ENST00000556648 HRES1P13985 223 aa5.61□□□□□ -1.51
TMEM260-211ENST00000556648 PSPHP1O15172 72 aa5.6□□□□□ -1.51
TMEM260-211ENST00000556648 KRTAP17-1Q9BYP8 105 aa5.59□□□□□ -1.51
TMEM260-211ENST00000556648 RYR3Q15413 4870 aa5.59□□□□□ -1.52
TMEM260-211ENST00000556648 C9orf92A6NGG3 77 aa5.58□□□□□ -1.52
TMEM260-211ENST00000556648 IGKV2D-30A0A075B6S6 120 aa5.57□□□□□ -1.52
TMEM260-211ENST00000556648 A8MUN3 132 aa5.56□□□□□ -1.52
TMEM260-211ENST00000556648 Q5VSD8 79 aa5.56□□□□□ -1.52
TMEM260-211ENST00000556648 HSPG2P98160 4391 aa5.54□□□□□ -1.52
TMEM260-211ENST00000556648 Q8N1X5 172 aa5.53□□□□□ -1.52
TMEM260-211ENST00000556648 DMAC1Q96GE9 116 aa5.53□□□□□ -1.52
TMEM260-211ENST00000556648 Q5VV11 94 aa5.52□□□□□ -1.53
TMEM260-211ENST00000556648 BRK1Q8WUW1 75 aa5.52□□□□□ -1.53
TMEM260-211ENST00000556648 RYR1P21817 5038 aa5.52□□□□□ -1.53
TMEM260-211ENST00000556648 PRR15LQ9BU68 103 aa5.52□□□□□ -1.53
TMEM260-211ENST00000556648 V9GYY9 64 aa5.52□□□□□ -1.53
TMEM260-211ENST00000556648 FLG2Q5D862 2391 aaPredicted RBP5.5□□□□□ -1.53
TMEM260-211ENST00000556648 A8MUU9 505 aa5.5□□□□□ -1.53
TMEM260-211ENST00000556648 ACYP2P14621 99 aa5.5□□□□□ -1.53
TMEM260-211ENST00000556648 C20orf166-AS1Q96NR2 134 aa5.5□□□□□ -1.53
TMEM260-211ENST00000556648 KRTAP10-8P60410 259 aa5.49□□□□□ -1.53
TMEM260-211ENST00000556648 TNXBP22105 4242 aa5.49□□□□□ -1.53
TMEM260-211ENST00000556648 LRP1Q07954 4544 aaKnown RBP5.49□□□□□ -1.53
TMEM260-211ENST00000556648 C7orf65Q6ZTY9 151 aa5.47□□□□□ -1.53
TMEM260-211ENST00000556648 PRO0628Q9UI54 55 aa5.47□□□□□ -1.53
TMEM260-211ENST00000556648 LINC01558Q9Y6Z2 57 aa5.47□□□□□ -1.53
TMEM260-211ENST00000556648 A8MU10 97 aa5.45□□□□□ -1.54
TMEM260-211ENST00000556648 CHKB-CPT1BH3BT56 60 aa5.45□□□□□ -1.54
TMEM260-211ENST00000556648 Q75L30 129 aa5.43□□□□□ -1.54
TMEM260-211ENST00000556648 KIAA1109Q2LD37 5005 aa5.43□□□□□ -1.54
TMEM260-211ENST00000556648 FAT3Q8TDW7 4589 aa5.42□□□□□ -1.54
TMEM260-211ENST00000556648 MT1HL1P0DM35 61 aa5.4□□□□□ -1.54
TMEM260-211ENST00000556648 EPPK1P58107 5090 aaKnown RBP5.39□□□□□ -1.55
TMEM260-211ENST00000556648 SPINK7P58062 85 aa5.38□□□□□ -1.55
TMEM260-211ENST00000556648 A6NED7 52 aa5.37□□□□□ -1.55
TMEM260-211ENST00000556648 KRTAP3-1Q9BYR8 98 aa5.36□□□□□ -1.55
TMEM260-211ENST00000556648 LCA10Q71F78 164 aa5.36□□□□□ -1.55
TMEM260-211ENST00000556648 XP32Q5T750 250 aa5.33□□□□□ -1.56
TMEM260-211ENST00000556648 MYCBP2O75592 4640 aa5.33□□□□□ -1.56
TMEM260-211ENST00000556648 KRTAP4-5Q9BYR2 181 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms