RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 TNRC18O15417 2968 aaPredicted RBP6.45□□□□□ -1.38
SPTB-208ENST00000556626 NF1P21359 2839 aa6.45□□□□□ -1.38
SPTB-208ENST00000556626 KRTAP1-1Q07627 177 aa6.44□□□□□ -1.38
SPTB-208ENST00000556626 KRTAP29-1A8MX34 341 aaPredicted RBP6.44□□□□□ -1.38
SPTB-208ENST00000556626 PANO1I0J062 215 aa6.43□□□□□ -1.38
SPTB-208ENST00000556626 SEC61BP60468 96 aaKnown RBP6.43□□□□□ -1.38
SPTB-208ENST00000556626 ADM2Q7Z4H4 148 aa6.43□□□□□ -1.38
SPTB-208ENST00000556626 MYO15AQ9UKN7 3530 aa6.42□□□□□ -1.38
SPTB-208ENST00000556626 KRTAP4-16G5E9R7 235 aaPredicted RBP6.4□□□□□ -1.38
SPTB-208ENST00000556626 NIPBLQ6KC79 2804 aaeCLIP6.4□□□□□ -1.39
SPTB-208ENST00000556626 PLAC4Q8WY50 150 aa6.39□□□□□ -1.39
SPTB-208ENST00000556626 NDUFAF8A1L188 74 aa6.37□□□□□ -1.39
SPTB-208ENST00000556626 TENM1Q9UKZ4 2725 aa6.37□□□□□ -1.39
SPTB-208ENST00000556626 PDZD2O15018 2839 aa6.35□□□□□ -1.39
SPTB-208ENST00000556626 A8MU10 97 aa6.35□□□□□ -1.39
SPTB-208ENST00000556626 ZANQ9Y493 2812 aa6.35□□□□□ -1.39
SPTB-208ENST00000556626 DCHS2Q6V1P9 2916 aa6.33□□□□□ -1.4
SPTB-208ENST00000556626 FBN2P35556 2912 aa6.33□□□□□ -1.4
SPTB-208ENST00000556626 KRTAP1-5Q9BYS1 174 aa6.33□□□□□ -1.4
SPTB-208ENST00000556626 ASPMQ8IZT6 3477 aa6.32□□□□□ -1.4
SPTB-208ENST00000556626 C20orf166-AS1Q96NR2 134 aa6.31□□□□□ -1.4
SPTB-208ENST00000556626 EYSQ5T1H1 3165 aa6.29□□□□□ -1.4
SPTB-208ENST00000556626 TGP01266 2768 aa6.29□□□□□ -1.4
SPTB-208ENST00000556626 CELSR1Q9NYQ6 3014 aa6.29□□□□□ -1.4
SPTB-208ENST00000556626 LAMA5O15230 3695 aa6.28□□□□□ -1.4
SPTB-208ENST00000556626 SRRM2Q9UQ35 2752 aaKnown RBP6.26□□□□□ -1.41
SPTB-208ENST00000556626 Q5VSD8 79 aa6.25□□□□□ -1.41
SPTB-208ENST00000556626 NOTCH2NLQ7Z3S9 236 aa6.23□□□□□ -1.41
SPTB-208ENST00000556626 TENM3Q9P273 2699 aa6.22□□□□□ -1.41
SPTB-208ENST00000556626 HRNRQ86YZ3 2850 aaPredicted RBP6.22□□□□□ -1.41
SPTB-208ENST00000556626 A8MUU9 505 aa6.21□□□□□ -1.42
SPTB-208ENST00000556626 RPS29P62273 56 aaKnown RBP6.21□□□□□ -1.42
SPTB-208ENST00000556626 KRTAP10-1P60331 282 aa6.19□□□□□ -1.42
SPTB-208ENST00000556626 MXRA5Q9NR99 2828 aa6.18□□□□□ -1.42
SPTB-208ENST00000556626 KRTAP10-2P60368 255 aa6.18□□□□□ -1.42
SPTB-208ENST00000556626 LOC400499M0QZD8 3231 aa6.16□□□□□ -1.42
SPTB-208ENST00000556626 DMDP11532 3685 aa6.15□□□□□ -1.42
SPTB-208ENST00000556626 KRTAP11-1Q8IUC1 163 aa6.15□□□□□ -1.43
SPTB-208ENST00000556626 SPENQ96T58 3664 aaKnown RBP6.13□□□□□ -1.43
SPTB-208ENST00000556626 C10orf95Q9H7T3 257 aa6.12□□□□□ -1.43
SPTB-208ENST00000556626 SMG1Q96Q15 3661 aaKnown RBP6.1□□□□□ -1.43
SPTB-208ENST00000556626 ZFHX3Q15911 3703 aa6.09□□□□□ -1.44
SPTB-208ENST00000556626 DCHS1Q96JQ0 3298 aa6.08□□□□□ -1.44
SPTB-208ENST00000556626 NBPF19A0A087WUL8 3843 aa6.08□□□□□ -1.44
SPTB-208ENST00000556626 RELNP78509 3460 aa6.08□□□□□ -1.44
SPTB-208ENST00000556626 TNP1P09430 55 aa6.08□□□□□ -1.44
SPTB-208ENST00000556626 CSMD1Q96PZ7 3565 aa6.07□□□□□ -1.44
SPTB-208ENST00000556626 PP632Q6XCG6 107 aa6.06□□□□□ -1.44
SPTB-208ENST00000556626 VWFP04275 2813 aa6.06□□□□□ -1.44
SPTB-208ENST00000556626 ZFHX4Q86UP3 3567 aa6.05□□□□□ -1.44
SPTB-208ENST00000556626 KRTAP13-1Q8IUC0 172 aa6.01□□□□□ -1.45
SPTB-208ENST00000556626 KRTAP7-1Q8IUC3 87 aa5.99□□□□□ -1.45
SPTB-208ENST00000556626 Q6ZRN7 208 aaPredicted RBP5.98□□□□□ -1.45
SPTB-208ENST00000556626 PKD1L1Q8TDX9 2849 aa5.98□□□□□ -1.45
SPTB-208ENST00000556626 KRTAP13-2Q52LG2 175 aa5.96□□□□□ -1.45
SPTB-208ENST00000556626 H0YAA0 97 aa5.95□□□□□ -1.46
SPTB-208ENST00000556626 TENM4Q6N022 2769 aa5.92□□□□□ -1.46
SPTB-208ENST00000556626 P0C880 135 aa5.9□□□□□ -1.46
SPTB-208ENST00000556626 COL7A1Q02388 2944 aa5.84□□□□□ -1.47
SPTB-208ENST00000556626 CUBNO60494 3623 aa5.83□□□□□ -1.48
SPTB-208ENST00000556626 SVEP1Q4LDE5 3571 aa5.82□□□□□ -1.48
SPTB-208ENST00000556626 TENM2Q9NT68 2774 aa5.82□□□□□ -1.48
SPTB-208ENST00000556626 VPS13CQ709C8 3753 aa5.79□□□□□ -1.48
SPTB-208ENST00000556626 KRTAP10-8P60410 259 aa5.75□□□□□ -1.49
SPTB-208ENST00000556626 MEGF8Q7Z7M0 2845 aa5.69□□□□□ -1.5
SPTB-208ENST00000556626 FBN1P35555 2871 aaKnown RBP5.69□□□□□ -1.5
SPTB-208ENST00000556626 XP32Q5T750 250 aa5.68□□□□□ -1.5
SPTB-208ENST00000556626 MUC3AQ02505 3323 aa5.64□□□□□ -1.51
SPTB-208ENST00000556626 PRO2289Q9P1D8 64 aa5.64□□□□□ -1.51
SPTB-208ENST00000556626 AKAP9Q99996 3911 aa5.62□□□□□ -1.51
SPTB-208ENST00000556626 KRTAP1-4P0C5Y4 121 aa5.61□□□□□ -1.51
SPTB-208ENST00000556626 OTOGQ6ZRI0 2925 aa5.59□□□□□ -1.51
SPTB-208ENST00000556626 TRRAPQ9Y4A5 3859 aa5.58□□□□□ -1.52
SPTB-208ENST00000556626 TPRXLQ17RH7 258 aa5.58□□□□□ -1.52
SPTB-208ENST00000556626 FBN3Q75N90 2809 aa5.57□□□□□ -1.52
SPTB-208ENST00000556626 CSMD2Q7Z408 3487 aa5.53□□□□□ -1.52
SPTB-208ENST00000556626 KRTAP12-2P59991 146 aa5.52□□□□□ -1.53
SPTB-208ENST00000556626 A0A1B0GVY2 172 aa5.51□□□□□ -1.53
SPTB-208ENST00000556626 KRTAP13-3Q3SY46 172 aa5.49□□□□□ -1.53
SPTB-208ENST00000556626 CSMD3Q7Z407 3707 aa5.48□□□□□ -1.53
SPTB-208ENST00000556626 KRTAP13-4Q3LI77 160 aa5.46□□□□□ -1.53
SPTB-208ENST00000556626 KRTAP10-10P60014 251 aa5.46□□□□□ -1.54
SPTB-208ENST00000556626 BSNQ9UPA5 3926 aa5.46□□□□□ -1.54
SPTB-208ENST00000556626 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.54
SPTB-208ENST00000556626 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
SPTB-208ENST00000556626 INE1O15225 51 aa5.33□□□□□ -1.56
SPTB-208ENST00000556626 KRTAP21-3Q3LHN1 58 aa5.29□□□□□ -1.56
SPTB-208ENST00000556626 KRTAP3-1Q9BYR8 98 aa5.14□□□□□ -1.59
SPTB-208ENST00000556626 ALMS1Q8TCU4 4167 aa5.14□□□□□ -1.59
SPTB-208ENST00000556626 ZNF469Q96JG9 3925 aaPredicted RBP5.12□□□□□ -1.59
SPTB-208ENST00000556626 KRTAP10-6P60371 365 aaPredicted RBP5.1□□□□□ -1.59
SPTB-208ENST00000556626 LYSTQ99698 3801 aa5.02□□□□□ -1.61
SPTB-208ENST00000556626 KRTAP10-12P60413 245 aa4.92□□□□□ -1.62
SPTB-208ENST00000556626 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
SPTB-208ENST00000556626 KRTAP3-2Q9BYR7 98 aa4.86□□□□□ -1.63
SPTB-208ENST00000556626 KRTAP3-3Q9BYR6 98 aa4.85□□□□□ -1.63
SPTB-208ENST00000556626 CMYA5Q8N3K9 4069 aa4.81□□□□□ -1.64
SPTB-208ENST00000556626 FRAS1Q86XX4 4008 aa4.8□□□□□ -1.64
SPTB-208ENST00000556626 HECTD4Q9Y4D8 3996 aa4.79□□□□□ -1.64
SPTB-208ENST00000556626 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms