RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 C8orf87E5RJ46 101 aa5.33□□□□□ -1.56
SPTLC2-205ENST00000556607 LCE2BO14633 110 aa5.33□□□□□ -1.56
SPTLC2-205ENST00000556607 C9JAW5 83 aa5.32□□□□□ -1.56
SPTLC2-205ENST00000556607 BAALC-AS2P0C853 105 aa5.32□□□□□ -1.56
SPTLC2-205ENST00000556607 KRTAP9-8Q9BYQ0 159 aa5.31□□□□□ -1.56
SPTLC2-205ENST00000556607 HRES1P13985 223 aa5.3□□□□□ -1.56
SPTLC2-205ENST00000556607 J3KT08 172 aa5.29□□□□□ -1.56
SPTLC2-205ENST00000556607 NDUFB1O75438 58 aa5.29□□□□□ -1.56
SPTLC2-205ENST00000556607 C21orf62-AS1Q17RA5 79 aa5.29□□□□□ -1.56
SPTLC2-205ENST00000556607 LYRM7Q5U5X0 104 aa5.29□□□□□ -1.56
SPTLC2-205ENST00000556607 MTURNQ8N3F0 131 aa5.29□□□□□ -1.56
SPTLC2-205ENST00000556607 ATXN8Q156A1 80 aa5.27□□□□□ -1.57
SPTLC2-205ENST00000556607 ZCCHC13Q8WW36 166 aaKnown RBP5.27□□□□□ -1.57
SPTLC2-205ENST00000556607 NAA38Q9BRA0 125 aaKnown RBP5.27□□□□□ -1.57
SPTLC2-205ENST00000556607 Q6ZQT0 140 aa5.26□□□□□ -1.57
SPTLC2-205ENST00000556607 JMJD7-PLA2G4BH0Y9G9 81 aa5.25□□□□□ -1.57
SPTLC2-205ENST00000556607 M0R143 59 aa5.25□□□□□ -1.57
SPTLC2-205ENST00000556607 MPLKIPQ8TAP9 179 aa5.25□□□□□ -1.57
SPTLC2-205ENST00000556607 MT2AP02795 61 aa5.24□□□□□ -1.57
SPTLC2-205ENST00000556607 SPINK7P58062 85 aa5.24□□□□□ -1.57
SPTLC2-205ENST00000556607 KRTAP10-10P60014 251 aa5.24□□□□□ -1.57
SPTLC2-205ENST00000556607 C14orf132Q9NPU4 83 aa5.22□□□□□ -1.57
SPTLC2-205ENST00000556607 C8orf17Q9NRJ1 99 aa5.22□□□□□ -1.57
SPTLC2-205ENST00000556607 A8MWP4 228 aa5.21□□□□□ -1.58
SPTLC2-205ENST00000556607 LOC110117498A0A087WWA1 95 aa5.2□□□□□ -1.58
SPTLC2-205ENST00000556607 MT1FP04733 61 aa5.2□□□□□ -1.58
SPTLC2-205ENST00000556607 PDE6GP18545 87 aa5.2□□□□□ -1.58
SPTLC2-205ENST00000556607 NREPQ16612 68 aa5.2□□□□□ -1.58
SPTLC2-205ENST00000556607 Q8N9P0 234 aaPredicted RBP5.2□□□□□ -1.58
SPTLC2-205ENST00000556607 IGKV3D-7A0A0C4DH55 119 aa5.19□□□□□ -1.58
SPTLC2-205ENST00000556607 A0A1B0GW54 56 aa5.19□□□□□ -1.58
SPTLC2-205ENST00000556607 Q6ZVQ6 151 aa5.19□□□□□ -1.58
SPTLC2-205ENST00000556607 BATFQ16520 125 aa5.18□□□□□ -1.58
SPTLC2-205ENST00000556607 WFDC13Q8IUB5 93 aa5.18□□□□□ -1.58
SPTLC2-205ENST00000556607 NDUFS5O43920 106 aa5.16□□□□□ -1.58
SPTLC2-205ENST00000556607 USH2AO75445 5202 aa5.15□□□□□ -1.58
SPTLC2-205ENST00000556607 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.15□□□□□ -1.59
SPTLC2-205ENST00000556607 PRR15Q8IV56 129 aa5.15□□□□□ -1.59
SPTLC2-205ENST00000556607 MRPL34Q9BQ48 92 aaKnown RBP5.14□□□□□ -1.59
SPTLC2-205ENST00000556607 KRTAP9-3Q9BYQ3 159 aa5.14□□□□□ -1.59
SPTLC2-205ENST00000556607 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
SPTLC2-205ENST00000556607 SSPOA2VEC9 5147 aa5.12□□□□□ -1.59
SPTLC2-205ENST00000556607 MMP24-AS1A0A0U1RRL7 71 aa5.12□□□□□ -1.59
SPTLC2-205ENST00000556607 hDV103S1A0JD37 113 aa5.12□□□□□ -1.59
SPTLC2-205ENST00000556607 TSTD3H0UI37 97 aa5.12□□□□□ -1.59
SPTLC2-205ENST00000556607 SMIM6P0DI80 62 aa5.12□□□□□ -1.59
SPTLC2-205ENST00000556607 TMEM254Q8TBM7 123 aa5.12□□□□□ -1.59
SPTLC2-205ENST00000556607 K7EQZ3 153 aa5.11□□□□□ -1.59
SPTLC2-205ENST00000556607 KRTAP19-1Q8IUB9 90 aa5.11□□□□□ -1.59
SPTLC2-205ENST00000556607 BPY2O14599 106 aa5.09□□□□□ -1.59
SPTLC2-205ENST00000556607 IGKV2D-30A0A075B6S6 120 aa5.08□□□□□ -1.6
SPTLC2-205ENST00000556607 H3BT86 120 aa5.08□□□□□ -1.6
SPTLC2-205ENST00000556607 IGKV2-30P06310 120 aa5.08□□□□□ -1.6
SPTLC2-205ENST00000556607 LINC00846Q9NV44 126 aa5.08□□□□□ -1.6
SPTLC2-205ENST00000556607 C9orf118A6NHY6 69 aa5.07□□□□□ -1.6
SPTLC2-205ENST00000556607 H1FX-AS1Q4G0G2 97 aa5.06□□□□□ -1.6
SPTLC2-205ENST00000556607 A0A1W2PPM0 123 aa5.05□□□□□ -1.6
SPTLC2-205ENST00000556607 TAX1BP3O14907 124 aa5.04□□□□□ -1.6
SPTLC2-205ENST00000556607 C7orf65Q6ZTY9 151 aa5.04□□□□□ -1.6
SPTLC2-205ENST00000556607 CASC2Q6XLA1 102 aa5.03□□□□□ -1.6
SPTLC2-205ENST00000556607 HCG22E2RYF7 251 aa5.02□□□□□ -1.61
SPTLC2-205ENST00000556607 Q8N9L7 120 aa5.02□□□□□ -1.61
SPTLC2-205ENST00000556607 FCGBPQ9Y6R7 5405 aaPredicted RBP5.02□□□□□ -1.61
SPTLC2-205ENST00000556607 Q5W150 140 aa5.01□□□□□ -1.61
SPTLC2-205ENST00000556607 SPCS1Q9Y6A9 102 aa5□□□□□ -1.61
SPTLC2-205ENST00000556607 MACF1Q9UPN3 7388 aaKnown RBP4.99□□□□□ -1.61
SPTLC2-205ENST00000556607 C4orf26Q17RF5 130 aa4.98□□□□□ -1.61
SPTLC2-205ENST00000556607 KRTAP19-6Q3LI70 58 aa4.97□□□□□ -1.61
SPTLC2-205ENST00000556607 UBL5Q9BZL1 73 aa4.97□□□□□ -1.61
SPTLC2-205ENST00000556607 CXCL6P80162 114 aa4.96□□□□□ -1.62
SPTLC2-205ENST00000556607 LOC105371267A0A1B0GV96 52 aa4.95□□□□□ -1.62
SPTLC2-205ENST00000556607 C5orf47Q569G3 176 aa4.93□□□□□ -1.62
SPTLC2-205ENST00000556607 SYNE2Q8WXH0 6885 aaKnown RBP4.93□□□□□ -1.62
SPTLC2-205ENST00000556607 FAM236AA0A1B0GUQ0 79 aa4.92□□□□□ -1.62
SPTLC2-205ENST00000556607 FAM236BA0A1B0GV22 79 aa4.92□□□□□ -1.62
SPTLC2-205ENST00000556607 COL5A1-AS1Q5SY13 56 aa4.9□□□□□ -1.63
SPTLC2-205ENST00000556607 H3BS24 57 aa4.89□□□□□ -1.63
SPTLC2-205ENST00000556607 S4R3F8 94 aa4.89□□□□□ -1.63
SPTLC2-205ENST00000556607 C1orf64Q8NEQ6 169 aa4.88□□□□□ -1.63
SPTLC2-205ENST00000556607 K7EP34 96 aa4.87□□□□□ -1.63
SPTLC2-205ENST00000556607 PRO0461Q9UI25 63 aa4.86□□□□□ -1.63
SPTLC2-205ENST00000556607 CSAG1Q6PB30 78 aa4.85□□□□□ -1.63
SPTLC2-205ENST00000556607 LCA10Q71F78 164 aa4.84□□□□□ -1.63
SPTLC2-205ENST00000556607 TP53AIP1Q9HCN2 124 aa4.84□□□□□ -1.63
SPTLC2-205ENST00000556607 GTF2H5Q6ZYL4 71 aa4.83□□□□□ -1.64
SPTLC2-205ENST00000556607 KRTAP3-1Q9BYR8 98 aa4.83□□□□□ -1.64
SPTLC2-205ENST00000556607 A6NN06 94 aa4.79□□□□□ -1.64
SPTLC2-205ENST00000556607 F8W1H4 67 aa4.79□□□□□ -1.64
SPTLC2-205ENST00000556607 ETDBQ3ZM63 59 aa4.79□□□□□ -1.64
SPTLC2-205ENST00000556607 Q5VV11 94 aa4.79□□□□□ -1.64
SPTLC2-205ENST00000556607 KRTAP6-3Q3LI67 103 aa4.78□□□□□ -1.64
SPTLC2-205ENST00000556607 PCP4L1A6NKN8 68 aa4.76□□□□□ -1.65
SPTLC2-205ENST00000556607 KLKP1Q107X0 134 aa4.75□□□□□ -1.65
SPTLC2-205ENST00000556607 CYP4F30PQ9H0H9 118 aa4.75□□□□□ -1.65
SPTLC2-205ENST00000556607 TRAV22A0A0B4J277 110 aa4.74□□□□□ -1.65
SPTLC2-205ENST00000556607 MT1BP07438 61 aa4.74□□□□□ -1.65
SPTLC2-205ENST00000556607 SPRR2GQ9BYE4 73 aa4.73□□□□□ -1.65
SPTLC2-205ENST00000556607 LOC101927531A0A1B0GV80 90 aa4.72□□□□□ -1.65
SPTLC2-205ENST00000556607 HIST1H4AP62805 103 aaKnown RBP4.72□□□□□ -1.65
SPTLC2-205ENST00000556607 KRTAP19-8Q3LI54 63 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms