RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	RYR3	Q15413	4870 aa		3.28	□□□□□ -1.88
ATL1-208	ENST00000556067		J3KT08	172 aa		3.28	□□□□□ -1.88
ATL1-208	ENST00000556067	LIMD2	Q9BT23	127 aa		3.28	□□□□□ -1.88
ATL1-208	ENST00000556067	LRP1B	Q9NZR2	4599 aa		3.27	□□□□□ -1.89
ATL1-208	ENST00000556067	NDUFB1	O75438	58 aa		3.27	□□□□□ -1.89
ATL1-208	ENST00000556067	SPAG11A	Q6PDA7	123 aa		3.27	□□□□□ -1.89
ATL1-208	ENST00000556067		A0A087X002	238 aa		3.26	□□□□□ -1.89
ATL1-208	ENST00000556067	KRTAP1-4	P0C5Y4	121 aa		3.26	□□□□□ -1.89
ATL1-208	ENST00000556067	SCGB1A1	P11684	91 aa		3.26	□□□□□ -1.89
ATL1-208	ENST00000556067	SPINK1	P00995	79 aa		3.25	□□□□□ -1.89
ATL1-208	ENST00000556067	KRTAP13-2	Q52LG2	175 aa		3.25	□□□□□ -1.89
ATL1-208	ENST00000556067	LINC00304	Q8N9R0	145 aa		3.25	□□□□□ -1.89
ATL1-208	ENST00000556067	IGKV4-1	P06312	121 aa		3.24	□□□□□ -1.89
ATL1-208	ENST00000556067	KRTAP10-4	P60372	401 aa	Predicted RBP	3.24	□□□□□ -1.89
ATL1-208	ENST00000556067	DEFB116	Q30KQ4	102 aa		3.24	□□□□□ -1.89
ATL1-208	ENST00000556067	SRRM2	Q9UQ35	2752 aa	Known RBP	3.23	□□□□□ -1.89
ATL1-208	ENST00000556067	APOB	P04114	4563 aa	Known RBP	3.23	□□□□□ -1.89
ATL1-208	ENST00000556067	FAM236A	A0A1B0GUQ0	79 aa		3.22	□□□□□ -1.89
ATL1-208	ENST00000556067	FAM236B	A0A1B0GV22	79 aa		3.22	□□□□□ -1.89
ATL1-208	ENST00000556067		A8MWP4	228 aa		3.22	□□□□□ -1.89
ATL1-208	ENST00000556067	RPS29	P62273	56 aa	Known RBP	3.22	□□□□□ -1.89
ATL1-208	ENST00000556067	ASB16-AS1	Q495Z4	193 aa		3.22	□□□□□ -1.89
ATL1-208	ENST00000556067		Q5XG85	94 aa		3.22	□□□□□ -1.89
ATL1-208	ENST00000556067	LINC00472	Q9H8W2	130 aa		3.22	□□□□□ -1.89
ATL1-208	ENST00000556067	PKHD1	P08F94	4074 aa		3.22	□□□□□ -1.89
ATL1-208	ENST00000556067	RYR1	P21817	5038 aa		3.21	□□□□□ -1.89
ATL1-208	ENST00000556067		A0A087WVE0	104 aa		3.21	□□□□□ -1.9
ATL1-208	ENST00000556067	ATOX1	O00244	68 aa		3.21	□□□□□ -1.9
ATL1-208	ENST00000556067	DSCR10	P59022	87 aa		3.21	□□□□□ -1.9
ATL1-208	ENST00000556067	SMIM20	Q8N5G0	67 aa		3.21	□□□□□ -1.9
ATL1-208	ENST00000556067		Q8N9L7	120 aa		3.21	□□□□□ -1.9
ATL1-208	ENST00000556067	IGHV6-1	A0A0B4J1U7	121 aa		3.2	□□□□□ -1.9
ATL1-208	ENST00000556067		K7EQZ3	153 aa		3.2	□□□□□ -1.9
ATL1-208	ENST00000556067	PRR15	Q8IV56	129 aa		3.2	□□□□□ -1.9
ATL1-208	ENST00000556067	ANAPC13	Q9BS18	74 aa		3.2	□□□□□ -1.9
ATL1-208	ENST00000556067		A0A1B0GVX0	72 aa		3.19	□□□□□ -1.9
ATL1-208	ENST00000556067	HCG22	E2RYF7	251 aa		3.19	□□□□□ -1.9
ATL1-208	ENST00000556067	OXT	P01178	125 aa		3.19	□□□□□ -1.9
ATL1-208	ENST00000556067	C8orf87	E5RJ46	101 aa		3.18	□□□□□ -1.9
ATL1-208	ENST00000556067	C1orf195	Q5TG92	126 aa		3.18	□□□□□ -1.9
ATL1-208	ENST00000556067	CASC2	Q6XLA1	102 aa		3.18	□□□□□ -1.9
ATL1-208	ENST00000556067	WFDC13	Q8IUB5	93 aa		3.18	□□□□□ -1.9
ATL1-208	ENST00000556067		Q96NJ1	140 aa		3.18	□□□□□ -1.9
ATL1-208	ENST00000556067	VPS13B	Q7Z7G8	4022 aa		3.18	□□□□□ -1.9
ATL1-208	ENST00000556067	MT3	P25713	68 aa		3.17	□□□□□ -1.9
ATL1-208	ENST00000556067	LINC00313	P59037	77 aa		3.17	□□□□□ -1.9
ATL1-208	ENST00000556067	KRTAP10-8	P60410	259 aa		3.17	□□□□□ -1.9
ATL1-208	ENST00000556067	C8orf17	Q9NRJ1	99 aa		3.17	□□□□□ -1.9
ATL1-208	ENST00000556067	EPPK1	P58107	5090 aa	Known RBP	3.17	□□□□□ -1.9
ATL1-208	ENST00000556067	FAT1	Q14517	4588 aa		3.16	□□□□□ -1.9
ATL1-208	ENST00000556067	TRAV7	A0A075B6U4	112 aa		3.16	□□□□□ -1.9
ATL1-208	ENST00000556067	hDV103S1	A0JD37	113 aa		3.16	□□□□□ -1.9
ATL1-208	ENST00000556067	NDUFS5	O43920	106 aa		3.16	□□□□□ -1.9
ATL1-208	ENST00000556067	KIAA1109	Q2LD37	5005 aa		3.15	□□□□□ -1.9
ATL1-208	ENST00000556067	KRTAP10-6	P60371	365 aa	Predicted RBP	3.15	□□□□□ -1.91
ATL1-208	ENST00000556067	SERP2	Q8N6R1	65 aa		3.15	□□□□□ -1.91
ATL1-208	ENST00000556067	TMEM254	Q8TBM7	123 aa		3.15	□□□□□ -1.91
ATL1-208	ENST00000556067	MMP24-AS1	A0A0U1RRL7	71 aa		3.14	□□□□□ -1.91
ATL1-208	ENST00000556067	MRPL34	Q9BQ48	92 aa	Known RBP	3.14	□□□□□ -1.91
ATL1-208	ENST00000556067	TP53AIP1	Q9HCN2	124 aa		3.14	□□□□□ -1.91
ATL1-208	ENST00000556067	BIRC6	Q9NR09	4857 aa		3.14	□□□□□ -1.91
ATL1-208	ENST00000556067	UQCRQ	O14949	82 aa		3.13	□□□□□ -1.91
ATL1-208	ENST00000556067	COX7C	P15954	63 aa		3.13	□□□□□ -1.91
ATL1-208	ENST00000556067	SEC61B	P60468	96 aa	Known RBP	3.13	□□□□□ -1.91
ATL1-208	ENST00000556067	FP248	Q71RG6	208 aa	Predicted RBP	3.13	□□□□□ -1.91
ATL1-208	ENST00000556067	HSPG2	P98160	4391 aa		3.13	□□□□□ -1.91
ATL1-208	ENST00000556067	MP68	P56378	58 aa		3.12	□□□□□ -1.91
ATL1-208	ENST00000556067	KRTAP10-7	P60409	375 aa	Predicted RBP	3.12	□□□□□ -1.91
ATL1-208	ENST00000556067	C5orf47	Q569G3	176 aa		3.12	□□□□□ -1.91
ATL1-208	ENST00000556067	PKHD1L1	Q86WI1	4243 aa		3.12	□□□□□ -1.91
ATL1-208	ENST00000556067	RETNLB	Q9BQ08	111 aa		3.11	□□□□□ -1.91
ATL1-208	ENST00000556067	OCR1	Q9BZK8	76 aa		3.1	□□□□□ -1.91
ATL1-208	ENST00000556067	IGLV7-46	A0A075B6I9	117 aa		3.09	□□□□□ -1.91
ATL1-208	ENST00000556067	C9orf92	A6NGG3	77 aa		3.09	□□□□□ -1.91
ATL1-208	ENST00000556067	MT1HL1	P0DM35	61 aa		3.09	□□□□□ -1.91
ATL1-208	ENST00000556067	PRR4	Q16378	134 aa		3.09	□□□□□ -1.91
ATL1-208	ENST00000556067	NOTCH2NL	Q7Z3S9	236 aa		3.09	□□□□□ -1.91
ATL1-208	ENST00000556067	C20orf197	Q8N268	126 aa		3.09	□□□□□ -1.91
ATL1-208	ENST00000556067	TRAV22	A0A0B4J277	110 aa		3.08	□□□□□ -1.92
ATL1-208	ENST00000556067		H0Y9P7	68 aa		3.08	□□□□□ -1.92
ATL1-208	ENST00000556067		H3BPC8	53 aa		3.08	□□□□□ -1.92
ATL1-208	ENST00000556067	CCDC179	H3BU77	68 aa		3.08	□□□□□ -1.92
ATL1-208	ENST00000556067	HERC2	O95714	4834 aa		3.07	□□□□□ -1.92
ATL1-208	ENST00000556067	NDUFC1	O43677	76 aa		3.07	□□□□□ -1.92
ATL1-208	ENST00000556067	FLG2	Q5D862	2391 aa	Predicted RBP	3.07	□□□□□ -1.92
ATL1-208	ENST00000556067	LINC00208	Q96KT6	92 aa		3.06	□□□□□ -1.92
ATL1-208	ENST00000556067	LOC101927531	A0A1B0GV80	90 aa		3.05	□□□□□ -1.92
ATL1-208	ENST00000556067	KRTAP16-1	A8MUX0	517 aa		3.05	□□□□□ -1.92
ATL1-208	ENST00000556067	C1orf64	Q8NEQ6	169 aa		3.05	□□□□□ -1.92
ATL1-208	ENST00000556067	SNURF	Q9Y675	71 aa		3.05	□□□□□ -1.92
ATL1-208	ENST00000556067	FAT3	Q8TDW7	4589 aa		3.05	□□□□□ -1.92
ATL1-208	ENST00000556067		A0A0U1RQV1	116 aa		3.04	□□□□□ -1.92
ATL1-208	ENST00000556067	KLKP1	Q107X0	134 aa		3.04	□□□□□ -1.92
ATL1-208	ENST00000556067	ATP11AUN	Q6ZP68	121 aa		3.04	□□□□□ -1.92
ATL1-208	ENST00000556067		A8MUU9	505 aa		3.03	□□□□□ -1.92
ATL1-208	ENST00000556067	ZCCHC13	Q8WW36	166 aa	Known RBP	3.03	□□□□□ -1.92
ATL1-208	ENST00000556067	C20orf166-AS1	Q96NR2	134 aa		3.03	□□□□□ -1.92
ATL1-208	ENST00000556067	ABCA13	Q86UQ4	5058 aa		3.03	□□□□□ -1.92
ATL1-208	ENST00000556067	DMBT1	Q9UGM3	2413 aa	Predicted RBP	3.03	□□□□□ -1.92
ATL1-208	ENST00000556067	LRP1	Q07954	4544 aa	Known RBP	3.03	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms