RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 S100A6P06703 90 aa6.82□□□□□ -1.32
CHMP4BP1-201ENST00000556017 LINC00846Q9NV44 126 aa6.82□□□□□ -1.32
CHMP4BP1-201ENST00000556017 A8MWP4 228 aa6.81□□□□□ -1.32
CHMP4BP1-201ENST00000556017 MTURNQ8N3F0 131 aa6.81□□□□□ -1.32
CHMP4BP1-201ENST00000556017 Q8N9P0 234 aaPredicted RBP6.81□□□□□ -1.32
CHMP4BP1-201ENST00000556017 TMEM256-PLSCR3K7ERE1 68 aa6.79□□□□□ -1.32
CHMP4BP1-201ENST00000556017 K7ERJ3 54 aa6.78□□□□□ -1.32
CHMP4BP1-201ENST00000556017 TMEM238LA0A1B0GVL6 79 aa6.77□□□□□ -1.33
CHMP4BP1-201ENST00000556017 A6NJY4 79 aa6.77□□□□□ -1.33
CHMP4BP1-201ENST00000556017 DNAL4O96015 105 aa6.77□□□□□ -1.33
CHMP4BP1-201ENST00000556017 UBE2V1Q13404 147 aa6.77□□□□□ -1.33
CHMP4BP1-201ENST00000556017 WFDC13Q8IUB5 93 aa6.77□□□□□ -1.33
CHMP4BP1-201ENST00000556017 H3BQ85 93 aa6.76□□□□□ -1.33
CHMP4BP1-201ENST00000556017 VAMP8Q9BV40 100 aa6.75□□□□□ -1.33
CHMP4BP1-201ENST00000556017 VPS25Q9BRG1 176 aa6.73□□□□□ -1.33
CHMP4BP1-201ENST00000556017 PSMB2P49721 201 aa6.71□□□□□ -1.34
CHMP4BP1-201ENST00000556017 Q6ZQT0 140 aa6.71□□□□□ -1.34
CHMP4BP1-201ENST00000556017 RBM3P98179 157 aaKnown RBP6.7□□□□□ -1.34
CHMP4BP1-201ENST00000556017 J3KT08 172 aa6.69□□□□□ -1.34
CHMP4BP1-201ENST00000556017 C8orf17Q9NRJ1 99 aa6.69□□□□□ -1.34
CHMP4BP1-201ENST00000556017 HSD52Q0P140 79 aa6.68□□□□□ -1.34
CHMP4BP1-201ENST00000556017 IGKV3D-7A0A0C4DH55 119 aa6.67□□□□□ -1.34
CHMP4BP1-201ENST00000556017 COX6CP09669 75 aa6.66□□□□□ -1.34
CHMP4BP1-201ENST00000556017 S100A1P23297 94 aa6.66□□□□□ -1.34
CHMP4BP1-201ENST00000556017 DSCR8Q96T75 97 aa6.66□□□□□ -1.34
CHMP4BP1-201ENST00000556017 H1FX-AS1Q4G0G2 97 aa6.64□□□□□ -1.35
CHMP4BP1-201ENST00000556017 C9JAW5 83 aa6.63□□□□□ -1.35
CHMP4BP1-201ENST00000556017 NDUFB1O75438 58 aa6.62□□□□□ -1.35
CHMP4BP1-201ENST00000556017 BAALC-AS2P0C853 105 aa6.62□□□□□ -1.35
CHMP4BP1-201ENST00000556017 Q6ZVQ6 151 aa6.62□□□□□ -1.35
CHMP4BP1-201ENST00000556017 PYY3Q5JQD4 70 aa6.61□□□□□ -1.35
CHMP4BP1-201ENST00000556017 C21orf62-AS1Q17RA5 79 aa6.6□□□□□ -1.35
CHMP4BP1-201ENST00000556017 NEBP20929 6669 aa6.59□□□□□ -1.35
CHMP4BP1-201ENST00000556017 MUC12Q9UKN1 5478 aa6.59□□□□□ -1.35
CHMP4BP1-201ENST00000556017 MMP24-AS1A0A0U1RRL7 71 aa6.58□□□□□ -1.36
CHMP4BP1-201ENST00000556017 MT1BP07438 61 aa6.58□□□□□ -1.36
CHMP4BP1-201ENST00000556017 LYRM7Q5U5X0 104 aa6.58□□□□□ -1.36
CHMP4BP1-201ENST00000556017 PRR15Q8IV56 129 aa6.58□□□□□ -1.36
CHMP4BP1-201ENST00000556017 LOC110117498A0A087WWA1 95 aa6.56□□□□□ -1.36
CHMP4BP1-201ENST00000556017 SCGB1C2P0DMR2 95 aa6.55□□□□□ -1.36
CHMP4BP1-201ENST00000556017 MRPL34Q9BQ48 92 aaKnown RBP6.55□□□□□ -1.36
CHMP4BP1-201ENST00000556017 A0A1B0GW54 56 aa6.54□□□□□ -1.36
CHMP4BP1-201ENST00000556017 TMEM254Q8TBM7 123 aa6.54□□□□□ -1.36
CHMP4BP1-201ENST00000556017 Q5W150 140 aa6.53□□□□□ -1.36
CHMP4BP1-201ENST00000556017 UQCR10Q9UDW1 63 aa6.51□□□□□ -1.37
CHMP4BP1-201ENST00000556017 A6NN06 94 aa6.49□□□□□ -1.37
CHMP4BP1-201ENST00000556017 JMJD7-PLA2G4BH0Y9G9 81 aa6.49□□□□□ -1.37
CHMP4BP1-201ENST00000556017 C14orf132Q9NPU4 83 aa6.49□□□□□ -1.37
CHMP4BP1-201ENST00000556017 IGKV2D-30A0A075B6S6 120 aa6.48□□□□□ -1.37
CHMP4BP1-201ENST00000556017 K7EQZ3 153 aa6.48□□□□□ -1.37
CHMP4BP1-201ENST00000556017 IGKV2-30P06310 120 aa6.48□□□□□ -1.37
CHMP4BP1-201ENST00000556017 KRTAP19-8Q3LI54 63 aa6.48□□□□□ -1.37
CHMP4BP1-201ENST00000556017 hDV103S1A0JD37 113 aa6.47□□□□□ -1.37
CHMP4BP1-201ENST00000556017 NAA38Q9BRA0 125 aaKnown RBP6.47□□□□□ -1.37
CHMP4BP1-201ENST00000556017 PDE6GP18545 87 aa6.46□□□□□ -1.38
CHMP4BP1-201ENST00000556017 KRTAP5-9P26371 169 aa6.46□□□□□ -1.38
CHMP4BP1-201ENST00000556017 NREPQ16612 68 aa6.45□□□□□ -1.38
CHMP4BP1-201ENST00000556017 KRTAP20-1Q3LI63 56 aa6.45□□□□□ -1.38
CHMP4BP1-201ENST00000556017 SPRR2GQ9BYE4 73 aa6.45□□□□□ -1.38
CHMP4BP1-201ENST00000556017 KRTAP3-1Q9BYR8 98 aa6.45□□□□□ -1.38
CHMP4BP1-201ENST00000556017 KRTAP10-5P60370 271 aa6.44□□□□□ -1.38
CHMP4BP1-201ENST00000556017 C7orf65Q6ZTY9 151 aa6.44□□□□□ -1.38
CHMP4BP1-201ENST00000556017 ATXN8Q156A1 80 aa6.43□□□□□ -1.38
CHMP4BP1-201ENST00000556017 C4orf26Q17RF5 130 aa6.43□□□□□ -1.38
CHMP4BP1-201ENST00000556017 NDUFS5O43920 106 aa6.42□□□□□ -1.38
CHMP4BP1-201ENST00000556017 C5orf47Q569G3 176 aa6.41□□□□□ -1.38
CHMP4BP1-201ENST00000556017 Q5VV11 94 aa6.41□□□□□ -1.38
CHMP4BP1-201ENST00000556017 KMT2DO14686 5537 aa6.41□□□□□ -1.38
CHMP4BP1-201ENST00000556017 MDN1Q9NU22 5596 aa6.39□□□□□ -1.39
CHMP4BP1-201ENST00000556017 FAM236AA0A1B0GUQ0 79 aa6.35□□□□□ -1.39
CHMP4BP1-201ENST00000556017 FAM236BA0A1B0GV22 79 aa6.35□□□□□ -1.39
CHMP4BP1-201ENST00000556017 Q8N9L7 120 aa6.35□□□□□ -1.39
CHMP4BP1-201ENST00000556017 HCG22E2RYF7 251 aa6.32□□□□□ -1.4
CHMP4BP1-201ENST00000556017 LCA10Q71F78 164 aa6.31□□□□□ -1.4
CHMP4BP1-201ENST00000556017 BPY2O14599 106 aa6.3□□□□□ -1.4
CHMP4BP1-201ENST00000556017 CASC2Q6XLA1 102 aa6.3□□□□□ -1.4
CHMP4BP1-201ENST00000556017 S4R3F8 94 aa6.29□□□□□ -1.4
CHMP4BP1-201ENST00000556017 M0R143 59 aa6.28□□□□□ -1.4
CHMP4BP1-201ENST00000556017 CSAG1Q6PB30 78 aa6.28□□□□□ -1.4
CHMP4BP1-201ENST00000556017 KLKP1Q107X0 134 aa6.27□□□□□ -1.41
CHMP4BP1-201ENST00000556017 CXCL6P80162 114 aa6.26□□□□□ -1.41
CHMP4BP1-201ENST00000556017 C1orf64Q8NEQ6 169 aa6.24□□□□□ -1.41
CHMP4BP1-201ENST00000556017 H3BT86 120 aa6.23□□□□□ -1.41
CHMP4BP1-201ENST00000556017 TMA7Q9Y2S6 64 aaKnown RBP6.23□□□□□ -1.41
CHMP4BP1-201ENST00000556017 KRTAP2-3P0C7H8 128 aa6.21□□□□□ -1.42
CHMP4BP1-201ENST00000556017 KRTAP2-4Q9BYR9 128 aa6.21□□□□□ -1.42
CHMP4BP1-201ENST00000556017 A0A087WVE0 104 aa6.18□□□□□ -1.42
CHMP4BP1-201ENST00000556017 C9orf118A6NHY6 69 aa6.13□□□□□ -1.43
CHMP4BP1-201ENST00000556017 TAX1BP3O14907 124 aa6.13□□□□□ -1.43
CHMP4BP1-201ENST00000556017 A0A1W2PPM0 123 aa6.12□□□□□ -1.43
CHMP4BP1-201ENST00000556017 SPRR2FQ96RM1 72 aa6.11□□□□□ -1.43
CHMP4BP1-201ENST00000556017 CRIPTQ9P021 101 aa6.11□□□□□ -1.43
CHMP4BP1-201ENST00000556017 BATFQ16520 125 aa6.1□□□□□ -1.43
CHMP4BP1-201ENST00000556017 TSTD3H0UI37 97 aa6.09□□□□□ -1.43
CHMP4BP1-201ENST00000556017 SPRR2EP22531 72 aa6.09□□□□□ -1.43
CHMP4BP1-201ENST00000556017 SPRR2BP35325 72 aa6.09□□□□□ -1.43
CHMP4BP1-201ENST00000556017 SPRR2AP35326 72 aa6.09□□□□□ -1.43
CHMP4BP1-201ENST00000556017 IMUPQ9GZP8 106 aa6.09□□□□□ -1.43
CHMP4BP1-201ENST00000556017 MT1XP80297 61 aa6.08□□□□□ -1.44
CHMP4BP1-201ENST00000556017 CYP4F30PQ9H0H9 118 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms