RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 DSCR10P59022 87 aa3.93□□□□□ -1.78
PTCSC3-201ENST00000556013 MPLKIPQ8TAP9 179 aa3.93□□□□□ -1.78
PTCSC3-201ENST00000556013 J3QR89 54 aa3.92□□□□□ -1.78
PTCSC3-201ENST00000556013 TRIAP1O43715 76 aa3.92□□□□□ -1.78
PTCSC3-201ENST00000556013 FXYD2P54710 66 aa3.92□□□□□ -1.78
PTCSC3-201ENST00000556013 RBM12B-AS1Q9P1G2 102 aa3.92□□□□□ -1.78
PTCSC3-201ENST00000556013 SIGMAR1Q99720 223 aa3.91□□□□□ -1.78
PTCSC3-201ENST00000556013 A0A1W2PPM0 123 aa3.9□□□□□ -1.79
PTCSC3-201ENST00000556013 C8orf87E5RJ46 101 aa3.9□□□□□ -1.79
PTCSC3-201ENST00000556013 TRACP01848 142 aa3.9□□□□□ -1.79
PTCSC3-201ENST00000556013 FAM236DA0A1B0GTK5 79 aa3.89□□□□□ -1.79
PTCSC3-201ENST00000556013 F8W1H4 67 aa3.89□□□□□ -1.79
PTCSC3-201ENST00000556013 CCKP06307 115 aa3.89□□□□□ -1.79
PTCSC3-201ENST00000556013 FAM236CP0DP71 79 aa3.89□□□□□ -1.79
PTCSC3-201ENST00000556013 HRES1P13985 223 aa3.89□□□□□ -1.79
PTCSC3-201ENST00000556013 PSMB2P49721 201 aa3.89□□□□□ -1.79
PTCSC3-201ENST00000556013 NOTCH2NLQ7Z3S9 236 aa3.89□□□□□ -1.79
PTCSC3-201ENST00000556013 MTURNQ8N3F0 131 aa3.89□□□□□ -1.79
PTCSC3-201ENST00000556013 SPCS1Q9Y6A9 102 aa3.89□□□□□ -1.79
PTCSC3-201ENST00000556013 J3KT08 172 aa3.88□□□□□ -1.79
PTCSC3-201ENST00000556013 RBM3P98179 157 aaKnown RBP3.88□□□□□ -1.79
PTCSC3-201ENST00000556013 USH2AO75445 5202 aa3.88□□□□□ -1.79
PTCSC3-201ENST00000556013 SSPOA2VEC9 5147 aa3.87□□□□□ -1.79
PTCSC3-201ENST00000556013 A0A1B0GW54 56 aa3.87□□□□□ -1.79
PTCSC3-201ENST00000556013 MT2AP02795 61 aa3.87□□□□□ -1.79
PTCSC3-201ENST00000556013 LYRM7Q5U5X0 104 aa3.87□□□□□ -1.79
PTCSC3-201ENST00000556013 IGHV6-1A0A0B4J1U7 121 aa3.86□□□□□ -1.79
PTCSC3-201ENST00000556013 A0A1B0GV72 72 aa3.86□□□□□ -1.79
PTCSC3-201ENST00000556013 A0A1B0GVX0 72 aa3.86□□□□□ -1.79
PTCSC3-201ENST00000556013 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.86□□□□□ -1.79
PTCSC3-201ENST00000556013 DSCR8Q96T75 97 aa3.86□□□□□ -1.79
PTCSC3-201ENST00000556013 KRTAP9-7A8MTY7 169 aa3.85□□□□□ -1.79
PTCSC3-201ENST00000556013 DEFB116Q30KQ4 102 aa3.85□□□□□ -1.79
PTCSC3-201ENST00000556013 C9JAW5 83 aa3.84□□□□□ -1.79
PTCSC3-201ENST00000556013 NDUFB1O75438 58 aa3.84□□□□□ -1.79
PTCSC3-201ENST00000556013 SCGB1C2P0DMR2 95 aa3.84□□□□□ -1.79
PTCSC3-201ENST00000556013 Q8N9P0 234 aaPredicted RBP3.84□□□□□ -1.79
PTCSC3-201ENST00000556013 ZCCHC13Q8WW36 166 aaKnown RBP3.84□□□□□ -1.79
PTCSC3-201ENST00000556013 KRTAP9-3Q9BYQ3 159 aa3.84□□□□□ -1.79
PTCSC3-201ENST00000556013 BAALC-AS2P0C853 105 aa3.83□□□□□ -1.8
PTCSC3-201ENST00000556013 KRTAP10-10P60014 251 aa3.83□□□□□ -1.8
PTCSC3-201ENST00000556013 Q6ZQT0 140 aa3.83□□□□□ -1.8
PTCSC3-201ENST00000556013 JMJD7-PLA2G4BH0Y9G9 81 aa3.82□□□□□ -1.8
PTCSC3-201ENST00000556013 K7ERJ3 54 aa3.82□□□□□ -1.8
PTCSC3-201ENST00000556013 MT1FP04733 61 aa3.82□□□□□ -1.8
PTCSC3-201ENST00000556013 SPINK7P58062 85 aa3.82□□□□□ -1.8
PTCSC3-201ENST00000556013 LINC00846Q9NV44 126 aa3.82□□□□□ -1.8
PTCSC3-201ENST00000556013 PDE6GP18545 87 aa3.81□□□□□ -1.8
PTCSC3-201ENST00000556013 NAA38Q9BRA0 125 aaKnown RBP3.8□□□□□ -1.8
PTCSC3-201ENST00000556013 FCGBPQ9Y6R7 5405 aaPredicted RBP3.79□□□□□ -1.8
PTCSC3-201ENST00000556013 A8MWP4 228 aa3.79□□□□□ -1.8
PTCSC3-201ENST00000556013 KRTAP19-1Q8IUB9 90 aa3.79□□□□□ -1.8
PTCSC3-201ENST00000556013 PRO0461Q9UI25 63 aa3.79□□□□□ -1.8
PTCSC3-201ENST00000556013 LOC110117498A0A087WWA1 95 aa3.78□□□□□ -1.8
PTCSC3-201ENST00000556013 ETDBQ3ZM63 59 aa3.78□□□□□ -1.8
PTCSC3-201ENST00000556013 C8orf17Q9NRJ1 99 aa3.78□□□□□ -1.8
PTCSC3-201ENST00000556013 ATXN8Q156A1 80 aa3.77□□□□□ -1.81
PTCSC3-201ENST00000556013 IGKV3D-7A0A0C4DH55 119 aa3.75□□□□□ -1.81
PTCSC3-201ENST00000556013 KRTAP19-6Q3LI70 58 aa3.75□□□□□ -1.81
PTCSC3-201ENST00000556013 Q6ZVQ6 151 aa3.75□□□□□ -1.81
PTCSC3-201ENST00000556013 WFDC13Q8IUB5 93 aa3.75□□□□□ -1.81
PTCSC3-201ENST00000556013 PRR15Q8IV56 129 aa3.75□□□□□ -1.81
PTCSC3-201ENST00000556013 NREPQ16612 68 aa3.73□□□□□ -1.81
PTCSC3-201ENST00000556013 TMEM254Q8TBM7 123 aa3.73□□□□□ -1.81
PTCSC3-201ENST00000556013 MRPL34Q9BQ48 92 aaKnown RBP3.73□□□□□ -1.81
PTCSC3-201ENST00000556013 H1FX-AS1Q4G0G2 97 aa3.71□□□□□ -1.82
PTCSC3-201ENST00000556013 ANAPC13Q9BS18 74 aa3.71□□□□□ -1.82
PTCSC3-201ENST00000556013 H3BT86 120 aa3.7□□□□□ -1.82
PTCSC3-201ENST00000556013 MT-ATP8P03928 68 aa3.7□□□□□ -1.82
PTCSC3-201ENST00000556013 C14orf132Q9NPU4 83 aa3.7□□□□□ -1.82
PTCSC3-201ENST00000556013 MMP24-AS1A0A0U1RRL7 71 aa3.69□□□□□ -1.82
PTCSC3-201ENST00000556013 FAM240AA0A1B0GVK7 77 aa3.69□□□□□ -1.82
PTCSC3-201ENST00000556013 hDV103S1A0JD37 113 aa3.69□□□□□ -1.82
PTCSC3-201ENST00000556013 ACYP1P07311 99 aa3.69□□□□□ -1.82
PTCSC3-201ENST00000556013 MACF1Q9UPN3 7388 aaKnown RBP3.69□□□□□ -1.82
PTCSC3-201ENST00000556013 IMUPQ9GZP8 106 aa3.68□□□□□ -1.82
PTCSC3-201ENST00000556013 SYNE2Q8WXH0 6885 aaKnown RBP3.68□□□□□ -1.82
PTCSC3-201ENST00000556013 K7EQZ3 153 aa3.65□□□□□ -1.83
PTCSC3-201ENST00000556013 C7orf65Q6ZTY9 151 aa3.65□□□□□ -1.83
PTCSC3-201ENST00000556013 BPY2O14599 106 aa3.64□□□□□ -1.83
PTCSC3-201ENST00000556013 NDUFS5O43920 106 aa3.64□□□□□ -1.83
PTCSC3-201ENST00000556013 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
PTCSC3-201ENST00000556013 Q5W150 140 aa3.63□□□□□ -1.83
PTCSC3-201ENST00000556013 IGKV2D-30A0A075B6S6 120 aa3.62□□□□□ -1.83
PTCSC3-201ENST00000556013 IGKV2-30P06310 120 aa3.62□□□□□ -1.83
PTCSC3-201ENST00000556013 CXCL6P80162 114 aa3.62□□□□□ -1.83
PTCSC3-201ENST00000556013 LINC00643Q86TS7 51 aa3.62□□□□□ -1.83
PTCSC3-201ENST00000556013 CASC2Q6XLA1 102 aa3.6□□□□□ -1.83
PTCSC3-201ENST00000556013 HCG22E2RYF7 251 aa3.59□□□□□ -1.83
PTCSC3-201ENST00000556013 CCDC179H3BU77 68 aa3.59□□□□□ -1.83
PTCSC3-201ENST00000556013 UQCRQO14949 82 aa3.59□□□□□ -1.83
PTCSC3-201ENST00000556013 ATOX1O00244 68 aa3.57□□□□□ -1.84
PTCSC3-201ENST00000556013 C4orf26Q17RF5 130 aa3.57□□□□□ -1.84
PTCSC3-201ENST00000556013 CSAG1Q6PB30 78 aa3.56□□□□□ -1.84
PTCSC3-201ENST00000556013 FAM236AA0A1B0GUQ0 79 aa3.55□□□□□ -1.84
PTCSC3-201ENST00000556013 FAM236BA0A1B0GV22 79 aa3.55□□□□□ -1.84
PTCSC3-201ENST00000556013 COX7CP15954 63 aa3.55□□□□□ -1.84
PTCSC3-201ENST00000556013 RPS28P62857 69 aaKnown RBP3.55□□□□□ -1.84
PTCSC3-201ENST00000556013 SMIM20Q8N5G0 67 aa3.55□□□□□ -1.84
PTCSC3-201ENST00000556013 UBL5Q9BZL1 73 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms