RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 PYY3Q5JQD4 70 aa6.39□□□□□ -1.39
HNRNPC-221ENST00000555883 K7ERJ3 54 aa6.38□□□□□ -1.39
HNRNPC-221ENST00000555883 C21orf62-AS1Q17RA5 79 aa6.37□□□□□ -1.39
HNRNPC-221ENST00000555883 NOTCH2NLQ7Z3S9 236 aa6.37□□□□□ -1.39
HNRNPC-221ENST00000555883 RBM12B-AS1Q9P1G2 102 aa6.37□□□□□ -1.39
HNRNPC-221ENST00000555883 USH2AO75445 5202 aa6.36□□□□□ -1.39
HNRNPC-221ENST00000555883 C8orf87E5RJ46 101 aa6.36□□□□□ -1.39
HNRNPC-221ENST00000555883 HRES1P13985 223 aa6.36□□□□□ -1.39
HNRNPC-221ENST00000555883 IGHV6-1A0A0B4J1U7 121 aa6.35□□□□□ -1.39
HNRNPC-221ENST00000555883 FAM236DA0A1B0GTK5 79 aa6.35□□□□□ -1.39
HNRNPC-221ENST00000555883 A0A1B0GV72 72 aa6.35□□□□□ -1.39
HNRNPC-221ENST00000555883 FAM236CP0DP71 79 aa6.35□□□□□ -1.39
HNRNPC-221ENST00000555883 DEFB116Q30KQ4 102 aa6.35□□□□□ -1.39
HNRNPC-221ENST00000555883 UQCR10Q9UDW1 63 aa6.35□□□□□ -1.39
HNRNPC-221ENST00000555883 A0A1B0GVX0 72 aa6.34□□□□□ -1.39
HNRNPC-221ENST00000555883 RBM3P98179 157 aaKnown RBP6.34□□□□□ -1.39
HNRNPC-221ENST00000555883 DSCR8Q96T75 97 aa6.33□□□□□ -1.4
HNRNPC-221ENST00000555883 J3KT08 172 aa6.32□□□□□ -1.4
HNRNPC-221ENST00000555883 MT2AP02795 61 aa6.32□□□□□ -1.4
HNRNPC-221ENST00000555883 SSPOA2VEC9 5147 aa6.31□□□□□ -1.4
HNRNPC-221ENST00000555883 LCE4AQ5TA78 99 aa6.31□□□□□ -1.4
HNRNPC-221ENST00000555883 SCGB1C2P0DMR2 95 aa6.3□□□□□ -1.4
HNRNPC-221ENST00000555883 A0A1B0GW54 56 aa6.29□□□□□ -1.4
HNRNPC-221ENST00000555883 C9JAW5 83 aa6.29□□□□□ -1.4
HNRNPC-221ENST00000555883 MTURNQ8N3F0 131 aa6.29□□□□□ -1.4
HNRNPC-221ENST00000555883 VPS25Q9BRG1 176 aa6.29□□□□□ -1.4
HNRNPC-221ENST00000555883 Q6ZQT0 140 aa6.28□□□□□ -1.4
HNRNPC-221ENST00000555883 ZCCHC13Q8WW36 166 aaKnown RBP6.28□□□□□ -1.4
HNRNPC-221ENST00000555883 KRTAP4-11Q9BYQ6 195 aa6.27□□□□□ -1.41
HNRNPC-221ENST00000555883 MT1FP04733 61 aa6.26□□□□□ -1.41
HNRNPC-221ENST00000555883 BAALC-AS2P0C853 105 aa6.26□□□□□ -1.41
HNRNPC-221ENST00000555883 Q8N9P0 234 aaPredicted RBP6.26□□□□□ -1.41
HNRNPC-221ENST00000555883 NDUFB1O75438 58 aa6.25□□□□□ -1.41
HNRNPC-221ENST00000555883 JMJD7-PLA2G4BH0Y9G9 81 aa6.24□□□□□ -1.41
HNRNPC-221ENST00000555883 SPINK7P58062 85 aa6.24□□□□□ -1.41
HNRNPC-221ENST00000555883 KRTAP9-3Q9BYQ3 159 aa6.24□□□□□ -1.41
HNRNPC-221ENST00000555883 FCGBPQ9Y6R7 5405 aaPredicted RBP6.22□□□□□ -1.41
HNRNPC-221ENST00000555883 LOC110117498A0A087WWA1 95 aa6.22□□□□□ -1.41
HNRNPC-221ENST00000555883 A8MWP4 228 aa6.22□□□□□ -1.41
HNRNPC-221ENST00000555883 PDE6GP18545 87 aa6.22□□□□□ -1.41
HNRNPC-221ENST00000555883 KRTAP10-10P60014 251 aa6.22□□□□□ -1.41
HNRNPC-221ENST00000555883 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.42
HNRNPC-221ENST00000555883 ATXN8Q156A1 80 aa6.21□□□□□ -1.42
HNRNPC-221ENST00000555883 M0R143 59 aa6.19□□□□□ -1.42
HNRNPC-221ENST00000555883 C8orf17Q9NRJ1 99 aa6.19□□□□□ -1.42
HNRNPC-221ENST00000555883 IGKV3D-7A0A0C4DH55 119 aa6.17□□□□□ -1.42
HNRNPC-221ENST00000555883 TMA7Q9Y2S6 64 aaKnown RBP6.17□□□□□ -1.42
HNRNPC-221ENST00000555883 Q6ZVQ6 151 aa6.15□□□□□ -1.42
HNRNPC-221ENST00000555883 LYRM7Q5U5X0 104 aa6.14□□□□□ -1.43
HNRNPC-221ENST00000555883 WFDC13Q8IUB5 93 aa6.14□□□□□ -1.43
HNRNPC-221ENST00000555883 PRR15Q8IV56 129 aa6.14□□□□□ -1.43
HNRNPC-221ENST00000555883 C14orf132Q9NPU4 83 aa6.12□□□□□ -1.43
HNRNPC-221ENST00000555883 NREPQ16612 68 aa6.11□□□□□ -1.43
HNRNPC-221ENST00000555883 NAA38Q9BRA0 125 aaKnown RBP6.11□□□□□ -1.43
HNRNPC-221ENST00000555883 TMEM254Q8TBM7 123 aa6.1□□□□□ -1.43
HNRNPC-221ENST00000555883 MRPL34Q9BQ48 92 aaKnown RBP6.1□□□□□ -1.43
HNRNPC-221ENST00000555883 MMP24-AS1A0A0U1RRL7 71 aa6.09□□□□□ -1.43
HNRNPC-221ENST00000555883 LINC00846Q9NV44 126 aa6.09□□□□□ -1.43
HNRNPC-221ENST00000555883 KRTAP19-6Q3LI70 58 aa6.07□□□□□ -1.44
HNRNPC-221ENST00000555883 SMIM6P0DI80 62 aa6.06□□□□□ -1.44
HNRNPC-221ENST00000555883 hDV103S1A0JD37 113 aa6.05□□□□□ -1.44
HNRNPC-221ENST00000555883 MACF1Q9UPN3 7388 aaKnown RBP6.04□□□□□ -1.44
HNRNPC-221ENST00000555883 H3BT86 120 aa6.04□□□□□ -1.44
HNRNPC-221ENST00000555883 H1FX-AS1Q4G0G2 97 aa6.04□□□□□ -1.44
HNRNPC-221ENST00000555883 K7EQZ3 153 aa6.03□□□□□ -1.44
HNRNPC-221ENST00000555883 LCE5AQ5TCM9 118 aa6.02□□□□□ -1.45
HNRNPC-221ENST00000555883 TSTD3H0UI37 97 aa6□□□□□ -1.45
HNRNPC-221ENST00000555883 SYNE2Q8WXH0 6885 aaKnown RBP6□□□□□ -1.45
HNRNPC-221ENST00000555883 BPY2O14599 106 aa5.99□□□□□ -1.45
HNRNPC-221ENST00000555883 NDUFS5O43920 106 aa5.99□□□□□ -1.45
HNRNPC-221ENST00000555883 C7orf65Q6ZTY9 151 aa5.99□□□□□ -1.45
HNRNPC-221ENST00000555883 C9orf118A6NHY6 69 aa5.97□□□□□ -1.45
HNRNPC-221ENST00000555883 A0A1W2PPM0 123 aa5.96□□□□□ -1.46
HNRNPC-221ENST00000555883 BATFQ16520 125 aa5.96□□□□□ -1.46
HNRNPC-221ENST00000555883 IGKV2D-30A0A075B6S6 120 aa5.95□□□□□ -1.46
HNRNPC-221ENST00000555883 IGKV2-30P06310 120 aa5.95□□□□□ -1.46
HNRNPC-221ENST00000555883 Q5W150 140 aa5.95□□□□□ -1.46
HNRNPC-221ENST00000555883 TAX1BP3O14907 124 aa5.93□□□□□ -1.46
HNRNPC-221ENST00000555883 CASC2Q6XLA1 102 aa5.93□□□□□ -1.46
HNRNPC-221ENST00000555883 CXCL6P80162 114 aa5.91□□□□□ -1.46
HNRNPC-221ENST00000555883 KRTAP5-3Q6L8H2 238 aa5.91□□□□□ -1.46
HNRNPC-221ENST00000555883 HCG22E2RYF7 251 aa5.89□□□□□ -1.47
HNRNPC-221ENST00000555883 Q8N9L7 120 aa5.88□□□□□ -1.47
HNRNPC-221ENST00000555883 C4orf26Q17RF5 130 aa5.87□□□□□ -1.47
HNRNPC-221ENST00000555883 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
HNRNPC-221ENST00000555883 SPCS1Q9Y6A9 102 aa5.85□□□□□ -1.47
HNRNPC-221ENST00000555883 KRTAP6-3Q3LI67 103 aa5.84□□□□□ -1.47
HNRNPC-221ENST00000555883 UBL5Q9BZL1 73 aa5.84□□□□□ -1.47
HNRNPC-221ENST00000555883 KRTAP3-1Q9BYR8 98 aa5.8□□□□□ -1.48
HNRNPC-221ENST00000555883 LOC105371267A0A1B0GV96 52 aa5.79□□□□□ -1.48
HNRNPC-221ENST00000555883 C5orf47Q569G3 176 aa5.79□□□□□ -1.48
HNRNPC-221ENST00000555883 PRO0461Q9UI25 63 aa5.79□□□□□ -1.48
HNRNPC-221ENST00000555883 TP53AIP1Q9HCN2 124 aa5.78□□□□□ -1.48
HNRNPC-221ENST00000555883 S4R3F8 94 aa5.78□□□□□ -1.48
HNRNPC-221ENST00000555883 CSAG1Q6PB30 78 aa5.77□□□□□ -1.49
HNRNPC-221ENST00000555883 FAM236AA0A1B0GUQ0 79 aa5.76□□□□□ -1.49
HNRNPC-221ENST00000555883 FAM236BA0A1B0GV22 79 aa5.76□□□□□ -1.49
HNRNPC-221ENST00000555883 C1orf64Q8NEQ6 169 aa5.76□□□□□ -1.49
HNRNPC-221ENST00000555883 SPRR2GQ9BYE4 73 aa5.76□□□□□ -1.49
HNRNPC-221ENST00000555883 COL5A1-AS1Q5SY13 56 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms