RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 RYR2Q92736 4967 aa4.62□□□□□ -1.67
LINC00641-202ENST00000555688 UQCRQO14949 82 aa4.61□□□□□ -1.67
LINC00641-202ENST00000555688 C9orf153Q5TBE3 101 aa4.61□□□□□ -1.67
LINC00641-202ENST00000555688 SERP2Q8N6R1 65 aa4.61□□□□□ -1.67
LINC00641-202ENST00000555688 LINC00472Q9H8W2 130 aa4.61□□□□□ -1.67
LINC00641-202ENST00000555688 MOBPQ13875 183 aa4.6□□□□□ -1.67
LINC00641-202ENST00000555688 DEFB116Q30KQ4 102 aa4.6□□□□□ -1.67
LINC00641-202ENST00000555688 KMT2CQ8NEZ4 4911 aaKnown RBP4.6□□□□□ -1.67
LINC00641-202ENST00000555688 DYNC1H1Q14204 4646 aaKnown RBP4.6□□□□□ -1.67
LINC00641-202ENST00000555688 K7EQZ3 153 aa4.6□□□□□ -1.67
LINC00641-202ENST00000555688 TRAV7A0A075B6U4 112 aa4.58□□□□□ -1.68
LINC00641-202ENST00000555688 Q96NJ1 140 aa4.58□□□□□ -1.68
LINC00641-202ENST00000555688 HRCT1Q6UXD1 115 aa4.57□□□□□ -1.68
LINC00641-202ENST00000555688 A0A087X002 238 aa4.56□□□□□ -1.68
LINC00641-202ENST00000555688 KRTAP1-4P0C5Y4 121 aa4.56□□□□□ -1.68
LINC00641-202ENST00000555688 SMIM20Q8N5G0 67 aa4.56□□□□□ -1.68
LINC00641-202ENST00000555688 CYSTM1Q9H1C7 97 aa4.56□□□□□ -1.68
LINC00641-202ENST00000555688 KRTAP13-2Q52LG2 175 aa4.55□□□□□ -1.68
LINC00641-202ENST00000555688 SSBP3-AS1Q7Z2R9 100 aa4.55□□□□□ -1.68
LINC00641-202ENST00000555688 OCR1Q9BZK8 76 aa4.55□□□□□ -1.68
LINC00641-202ENST00000555688 PRR15Q8IV56 129 aa4.55□□□□□ -1.68
LINC00641-202ENST00000555688 APOBP04114 4563 aaKnown RBP4.54□□□□□ -1.68
LINC00641-202ENST00000555688 A8MWP4 228 aa4.54□□□□□ -1.68
LINC00641-202ENST00000555688 FAM229BQ4G0N7 80 aa4.54□□□□□ -1.68
LINC00641-202ENST00000555688 KRTAP29-1A8MX34 341 aaPredicted RBP4.53□□□□□ -1.68
LINC00641-202ENST00000555688 HCG22E2RYF7 251 aa4.53□□□□□ -1.68
LINC00641-202ENST00000555688 CD164Q04900 197 aa4.53□□□□□ -1.68
LINC00641-202ENST00000555688 J3KT08 172 aa4.53□□□□□ -1.69
LINC00641-202ENST00000555688 SS18L2Q9UHA2 77 aa4.53□□□□□ -1.69
LINC00641-202ENST00000555688 SMR3BP02814 79 aaPredicted RBP4.52□□□□□ -1.69
LINC00641-202ENST00000555688 KRTAP10-4P60372 401 aaPredicted RBP4.52□□□□□ -1.69
LINC00641-202ENST00000555688 C20orf197Q8N268 126 aa4.51□□□□□ -1.69
LINC00641-202ENST00000555688 SPINK6Q6UWN8 80 aa4.5□□□□□ -1.69
LINC00641-202ENST00000555688 FAT1Q14517 4588 aa4.5□□□□□ -1.69
LINC00641-202ENST00000555688 KLKP1Q107X0 134 aa4.5□□□□□ -1.69
LINC00641-202ENST00000555688 WFDC13Q8IUB5 93 aa4.5□□□□□ -1.69
LINC00641-202ENST00000555688 MMP24-AS1A0A0U1RRL7 71 aa4.49□□□□□ -1.69
LINC00641-202ENST00000555688 CDK2AP2O75956 126 aa4.49□□□□□ -1.69
LINC00641-202ENST00000555688 ASB16-AS1Q495Z4 193 aa4.49□□□□□ -1.69
LINC00641-202ENST00000555688 NDUFB1O75438 58 aa4.48□□□□□ -1.69
LINC00641-202ENST00000555688 Q5XG85 94 aa4.48□□□□□ -1.69
LINC00641-202ENST00000555688 CASC2Q6XLA1 102 aa4.48□□□□□ -1.69
LINC00641-202ENST00000555688 RYR3Q15413 4870 aa4.48□□□□□ -1.69
LINC00641-202ENST00000555688 SNURFQ9Y675 71 aa4.48□□□□□ -1.69
LINC00641-202ENST00000555688 A0A0U1RQV1 116 aa4.47□□□□□ -1.69
LINC00641-202ENST00000555688 A0A1B0GVX0 72 aa4.47□□□□□ -1.69
LINC00641-202ENST00000555688 TMEM254Q8TBM7 123 aa4.47□□□□□ -1.69
LINC00641-202ENST00000555688 H7BZZ5 65 aa4.46□□□□□ -1.7
LINC00641-202ENST00000555688 NOTCH2NLQ7Z3S9 236 aa4.46□□□□□ -1.7
LINC00641-202ENST00000555688 C8orf17Q9NRJ1 99 aa4.46□□□□□ -1.7
LINC00641-202ENST00000555688 hDV103S1A0JD37 113 aa4.45□□□□□ -1.7
LINC00641-202ENST00000555688 IGHV6-1A0A0B4J1U7 121 aa4.45□□□□□ -1.7
LINC00641-202ENST00000555688 C1orf195Q5TG92 126 aa4.45□□□□□ -1.7
LINC00641-202ENST00000555688 TYMSOSQ8TAI1 123 aa4.45□□□□□ -1.7
LINC00641-202ENST00000555688 TMEM258P61165 79 aa4.44□□□□□ -1.7
LINC00641-202ENST00000555688 C5orf47Q569G3 176 aa4.44□□□□□ -1.7
LINC00641-202ENST00000555688 ZCCHC13Q8WW36 166 aaKnown RBP4.43□□□□□ -1.7
LINC00641-202ENST00000555688 PKHD1L1Q86WI1 4243 aa4.42□□□□□ -1.7
LINC00641-202ENST00000555688 HSPG2P98160 4391 aa4.41□□□□□ -1.7
LINC00641-202ENST00000555688 NDUFC1O43677 76 aa4.41□□□□□ -1.7
LINC00641-202ENST00000555688 SPINK1P00995 79 aa4.41□□□□□ -1.7
LINC00641-202ENST00000555688 PRAC1Q96KF2 57 aa4.41□□□□□ -1.7
LINC00641-202ENST00000555688 MRPL34Q9BQ48 92 aaKnown RBP4.4□□□□□ -1.7
LINC00641-202ENST00000555688 LIMD2Q9BT23 127 aa4.4□□□□□ -1.7
LINC00641-202ENST00000555688 RPS29P62273 56 aaKnown RBP4.39□□□□□ -1.71
LINC00641-202ENST00000555688 LINC00304Q8N9R0 145 aa4.39□□□□□ -1.71
LINC00641-202ENST00000555688 C8orf87E5RJ46 101 aa4.38□□□□□ -1.71
LINC00641-202ENST00000555688 H0Y9P7 68 aa4.38□□□□□ -1.71
LINC00641-202ENST00000555688 TP53AIP1Q9HCN2 124 aa4.38□□□□□ -1.71
LINC00641-202ENST00000555688 RYR1P21817 5038 aa4.38□□□□□ -1.71
LINC00641-202ENST00000555688 FAM236DA0A1B0GTK5 79 aa4.37□□□□□ -1.71
LINC00641-202ENST00000555688 FAM236CP0DP71 79 aa4.37□□□□□ -1.71
LINC00641-202ENST00000555688 MP68P56378 58 aa4.37□□□□□ -1.71
LINC00641-202ENST00000555688 SPAG11AQ6PDA7 123 aa4.37□□□□□ -1.71
LINC00641-202ENST00000555688 H3BPC8 53 aa4.37□□□□□ -1.71
LINC00641-202ENST00000555688 LINC00313P59037 77 aa4.37□□□□□ -1.71
LINC00641-202ENST00000555688 RPS28P62857 69 aaKnown RBP4.37□□□□□ -1.71
LINC00641-202ENST00000555688 LINC00208Q96KT6 92 aa4.37□□□□□ -1.71
LINC00641-202ENST00000555688 TRAV22A0A0B4J277 110 aa4.36□□□□□ -1.71
LINC00641-202ENST00000555688 KRTAP16-1A8MUX0 517 aa4.36□□□□□ -1.71
LINC00641-202ENST00000555688 NDUFS5O43920 106 aa4.35□□□□□ -1.71
LINC00641-202ENST00000555688 OXTP01178 125 aa4.35□□□□□ -1.71
LINC00641-202ENST00000555688 KRTAP13-3Q3SY46 172 aa4.35□□□□□ -1.71
LINC00641-202ENST00000555688 Q5VSD8 79 aa4.35□□□□□ -1.71
LINC00641-202ENST00000555688 Q5W150 140 aa4.35□□□□□ -1.71
LINC00641-202ENST00000555688 C1orf64Q8NEQ6 169 aa4.35□□□□□ -1.71
LINC00641-202ENST00000555688 LRP1Q07954 4544 aaKnown RBP4.34□□□□□ -1.72
LINC00641-202ENST00000555688 TNXBP22105 4242 aa4.33□□□□□ -1.72
LINC00641-202ENST00000555688 MT3P25713 68 aa4.33□□□□□ -1.72
LINC00641-202ENST00000555688 KRTAP10-8P60410 259 aa4.33□□□□□ -1.72
LINC00641-202ENST00000555688 KIAA1109Q2LD37 5005 aa4.33□□□□□ -1.72
LINC00641-202ENST00000555688 FLG2Q5D862 2391 aaPredicted RBP4.33□□□□□ -1.72
LINC00641-202ENST00000555688 ATP5EP56381 51 aaPredicted RBP4.32□□□□□ -1.72
LINC00641-202ENST00000555688 EPPK1P58107 5090 aaKnown RBP4.32□□□□□ -1.72
LINC00641-202ENST00000555688 SERP1Q9Y6X1 66 aa4.31□□□□□ -1.72
LINC00641-202ENST00000555688 CYP4F30PQ9H0H9 118 aa4.29□□□□□ -1.72
LINC00641-202ENST00000555688 FAT3Q8TDW7 4589 aa4.29□□□□□ -1.72
LINC00641-202ENST00000555688 SPANXA2-OT1Q8N9U9 137 aa4.28□□□□□ -1.72
LINC00641-202ENST00000555688 PRR4Q16378 134 aa4.27□□□□□ -1.73
LINC00641-202ENST00000555688 RETNLBQ9BQ08 111 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 352 ms