RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 KRTAP13-2Q52LG2 175 aa14.21□□□□□ -0.14
TMEM260-207ENST00000555497 MP68P56378 58 aa14.19□□□□□ -0.14
TMEM260-207ENST00000555497 NOTCH2NLQ7Z3S9 236 aa14.19□□□□□ -0.14
TMEM260-207ENST00000555497 VPS13BQ7Z7G8 4022 aa14.19□□□□□ -0.14
TMEM260-207ENST00000555497 H0Y9P7 68 aa14.18□□□□□ -0.14
TMEM260-207ENST00000555497 CD164Q04900 197 aa14.18□□□□□ -0.14
TMEM260-207ENST00000555497 LINC00208Q96KT6 92 aa14.18□□□□□ -0.14
TMEM260-207ENST00000555497 CYP4F30PQ9H0H9 118 aa14.17□□□□□ -0.14
TMEM260-207ENST00000555497 PKHD1P08F94 4074 aa14.16□□□□□ -0.14
TMEM260-207ENST00000555497 CDK2AP2O75956 126 aa14.16□□□□□ -0.14
TMEM260-207ENST00000555497 SPINK6Q6UWN8 80 aa14.16□□□□□ -0.14
TMEM260-207ENST00000555497 Q1T7F1 81 aa14.15□□□□□ -0.14
TMEM260-207ENST00000555497 KRTAP1-4P0C5Y4 121 aa14.14□□□□□ -0.15
TMEM260-207ENST00000555497 TRAV22A0A0B4J277 110 aa14.11□□□□□ -0.15
TMEM260-207ENST00000555497 H3BPC8 53 aa14.07□□□□□ -0.16
TMEM260-207ENST00000555497 MRPL34Q9BQ48 92 aaKnown RBP14.05□□□□□ -0.16
TMEM260-207ENST00000555497 PRR4Q16378 134 aa14.05□□□□□ -0.16
TMEM260-207ENST00000555497 TP53AIP1Q9HCN2 124 aa14.03□□□□□ -0.16
TMEM260-207ENST00000555497 NDUFS5O43920 106 aa14.02□□□□□ -0.16
TMEM260-207ENST00000555497 C1orf195Q5TG92 126 aa14.02□□□□□ -0.17
TMEM260-207ENST00000555497 DYNC1H1Q14204 4646 aaKnown RBP13.98□□□□□ -0.17
TMEM260-207ENST00000555497 A0A1B0GVY2 172 aa13.97□□□□□ -0.17
TMEM260-207ENST00000555497 PLA2G1BP04054 148 aaKnown RBP13.96□□□□□ -0.17
TMEM260-207ENST00000555497 PSPHP1O15172 72 aa13.94□□□□□ -0.18
TMEM260-207ENST00000555497 SPANXA2-OT1Q8N9U9 137 aa13.94□□□□□ -0.18
TMEM260-207ENST00000555497 SMR3BP02814 79 aaPredicted RBP13.91□□□□□ -0.18
TMEM260-207ENST00000555497 V9GYY9 64 aa13.91□□□□□ -0.18
TMEM260-207ENST00000555497 C8orf87E5RJ46 101 aa13.87□□□□□ -0.19
TMEM260-207ENST00000555497 TYMSOSQ8TAI1 123 aa13.87□□□□□ -0.19
TMEM260-207ENST00000555497 Q5W150 140 aa13.86□□□□□ -0.19
TMEM260-207ENST00000555497 PCOTHQ58A44 107 aa13.85□□□□□ -0.19
TMEM260-207ENST00000555497 RYR2Q92736 4967 aa13.84□□□□□ -0.19
TMEM260-207ENST00000555497 LINC00313P59037 77 aa13.83□□□□□ -0.2
TMEM260-207ENST00000555497 A8MUN3 132 aa13.83□□□□□ -0.2
TMEM260-207ENST00000555497 KRTAP13-3Q3SY46 172 aa13.82□□□□□ -0.2
TMEM260-207ENST00000555497 LIMD2Q9BT23 127 aa13.82□□□□□ -0.2
TMEM260-207ENST00000555497 APOBP04114 4563 aaKnown RBP13.81□□□□□ -0.2
TMEM260-207ENST00000555497 PRR26Q8N8Z3 221 aa13.81□□□□□ -0.2
TMEM260-207ENST00000555497 C4orf48Q5BLP8 95 aa13.79□□□□□ -0.2
TMEM260-207ENST00000555497 KRTAP10-4P60372 401 aaPredicted RBP13.77□□□□□ -0.21
TMEM260-207ENST00000555497 Q5VV11 94 aa13.77□□□□□ -0.21
TMEM260-207ENST00000555497 FAT1Q14517 4588 aa13.77□□□□□ -0.21
TMEM260-207ENST00000555497 IGLV7-46A0A075B6I9 117 aa13.76□□□□□ -0.21
TMEM260-207ENST00000555497 Q8N9P0 234 aaPredicted RBP13.76□□□□□ -0.21
TMEM260-207ENST00000555497 KMT2CQ8NEZ4 4911 aaKnown RBP13.76□□□□□ -0.21
TMEM260-207ENST00000555497 SPINK1P00995 79 aa13.75□□□□□ -0.21
TMEM260-207ENST00000555497 KRTAP16-1A8MUX0 517 aa13.74□□□□□ -0.21
TMEM260-207ENST00000555497 LINC00304Q8N9R0 145 aa13.69□□□□□ -0.22
TMEM260-207ENST00000555497 PMAIP1Q13794 54 aa13.68□□□□□ -0.22
TMEM260-207ENST00000555497 LOC101927531A0A1B0GV80 90 aa13.67□□□□□ -0.22
TMEM260-207ENST00000555497 RETNLBQ9BQ08 111 aa13.66□□□□□ -0.22
TMEM260-207ENST00000555497 COA5Q86WW8 74 aa13.64□□□□□ -0.23
TMEM260-207ENST00000555497 CHKB-CPT1BH3BT56 60 aa13.63□□□□□ -0.23
TMEM260-207ENST00000555497 PRR15LQ9BU68 103 aa13.62□□□□□ -0.23
TMEM260-207ENST00000555497 A8MU10 97 aa13.61□□□□□ -0.23
TMEM260-207ENST00000555497 FAM229AH3BQW9 127 aa13.6□□□□□ -0.23
TMEM260-207ENST00000555497 RPS29P62273 56 aaKnown RBP13.59□□□□□ -0.23
TMEM260-207ENST00000555497 SPAG11AQ6PDA7 123 aa13.58□□□□□ -0.24
TMEM260-207ENST00000555497 SEC61GP60059 68 aa13.58□□□□□ -0.24
TMEM260-207ENST00000555497 PKHD1L1Q86WI1 4243 aa13.56□□□□□ -0.24
TMEM260-207ENST00000555497 Q75L30 129 aa13.56□□□□□ -0.24
TMEM260-207ENST00000555497 IGKV2-30P06310 120 aa13.49□□□□□ -0.25
TMEM260-207ENST00000555497 HRES1P13985 223 aa13.49□□□□□ -0.25
TMEM260-207ENST00000555497 LCA10Q71F78 164 aa13.45□□□□□ -0.26
TMEM260-207ENST00000555497 A6NED7 52 aa13.43□□□□□ -0.26
TMEM260-207ENST00000555497 LINC01558Q9Y6Z2 57 aa13.43□□□□□ -0.26
TMEM260-207ENST00000555497 ATP11AUNQ6ZP68 121 aa13.41□□□□□ -0.26
TMEM260-207ENST00000555497 RYR3Q15413 4870 aa13.37□□□□□ -0.27
TMEM260-207ENST00000555497 IGKV2D-30A0A075B6S6 120 aa13.36□□□□□ -0.27
TMEM260-207ENST00000555497 SPTSSBQ8NFR3 76 aa13.36□□□□□ -0.27
TMEM260-207ENST00000555497 CDC42SE1Q9NRR8 79 aa13.35□□□□□ -0.27
TMEM260-207ENST00000555497 HSPG2P98160 4391 aa13.34□□□□□ -0.27
TMEM260-207ENST00000555497 C9orf92A6NGG3 77 aa13.33□□□□□ -0.28
TMEM260-207ENST00000555497 DMAC1Q96GE9 116 aa13.32□□□□□ -0.28
TMEM260-207ENST00000555497 FLG2Q5D862 2391 aaPredicted RBP13.3□□□□□ -0.28
TMEM260-207ENST00000555497 KTN1-AS1Q86SY8 53 aa13.3□□□□□ -0.28
TMEM260-207ENST00000555497 ACYP2P14621 99 aa13.29□□□□□ -0.28
TMEM260-207ENST00000555497 LRP1Q07954 4544 aaKnown RBP13.27□□□□□ -0.29
TMEM260-207ENST00000555497 Q5VSD8 79 aa13.27□□□□□ -0.29
TMEM260-207ENST00000555497 KRTAP17-1Q9BYP8 105 aa13.26□□□□□ -0.29
TMEM260-207ENST00000555497 A6NN06 94 aa13.25□□□□□ -0.29
TMEM260-207ENST00000555497 Q8N1X5 172 aa13.25□□□□□ -0.29
TMEM260-207ENST00000555497 C20orf166-AS1Q96NR2 134 aa13.22□□□□□ -0.29
TMEM260-207ENST00000555497 TNXBP22105 4242 aa13.22□□□□□ -0.29
TMEM260-207ENST00000555497 A8MUU9 505 aa13.21□□□□□ -0.29
TMEM260-207ENST00000555497 KRTAP10-8P60410 259 aa13.2□□□□□ -0.3
TMEM260-207ENST00000555497 SPINK7P58062 85 aa13.19□□□□□ -0.3
TMEM260-207ENST00000555497 RYR1P21817 5038 aa13.17□□□□□ -0.3
TMEM260-207ENST00000555497 C7orf65Q6ZTY9 151 aa13.15□□□□□ -0.3
TMEM260-207ENST00000555497 FAT3Q8TDW7 4589 aa13.11□□□□□ -0.31
TMEM260-207ENST00000555497 RBM12B-AS1Q9P1G2 102 aa13.05□□□□□ -0.32
TMEM260-207ENST00000555497 KIAA1109Q2LD37 5005 aa13.03□□□□□ -0.32
TMEM260-207ENST00000555497 DMBT1Q9UGM3 2413 aaPredicted RBP13.01□□□□□ -0.33
TMEM260-207ENST00000555497 MT1HL1P0DM35 61 aa12.91□□□□□ -0.34
TMEM260-207ENST00000555497 MYCBP2O75592 4640 aa12.89□□□□□ -0.35
TMEM260-207ENST00000555497 EPPK1P58107 5090 aaKnown RBP12.88□□□□□ -0.35
TMEM260-207ENST00000555497 KRTAP3-1Q9BYR8 98 aa12.87□□□□□ -0.35
TMEM260-207ENST00000555497 A0A1B0GU69 56 aa12.84□□□□□ -0.35
TMEM260-207ENST00000555497 SPATA8Q6RVD6 105 aa12.77□□□□□ -0.37
TMEM260-207ENST00000555497 XP32Q5T750 250 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms